Nematode-extracted serine protease inhibitors and anticoagulant proteins

ABSTRACT

Proteins which have activity as anticoagulants and/or serine protease inhibitors and have at least one NAP domain and are described. Certain of these proteins have factor Xa inhibitory activity and others have activity as inhibitors of factor VIIa/TF. These proteins can be isolated from natural sources as nematodes, chemically synthesized or made by recombinant methods using various DNA expression systems.

CROSS REFERENCE TO RELATED APPLICATION

This application is a Continuation-in-Part of U.S. Ser. No. 08/461,965,now U.S. Pat. No. 5,872,098, U.S. Ser No. 08/465,380, now U.S. Pat. No.5,863,894, U.S. Ser. No. 08/486,397, now U.S. Pat. No. 5,866,542 andU.S. Ser. No. 08/486,399, now U.S. Pat. No. 5,866,543, all filed on Jun.5, 1995, each of which is a continuation-in-part of U.S. Ser. No.08/326,110, now U.S. Pat. No. 5,945,275, filed Oct. 15, 1994; thedisclosures of all these applications are incorporated herein byreference.

FIELD OF THE INVENTION

The present invention relates to specific proteins as well asrecombinant versions of these proteins which are serine proteaseinhibitors, including potent anticoagulants in human plasma. Theseproteins include certain proteins extracted from nematodes. In anotheraspect, the present invention relates to compositions comprising theseproteins, which are useful as potent and specific inhibitors of bloodcoagulation enzymes in vitro and in vivo, and methods for their use asin vitro diagnostic agents, or as in vivo therapeutic agents, to preventthe clotting of blood. In a further aspect, the invention relates tonucleic acid sequences, including mRNA and DNA, encoding the proteinsand their use in vectors to transfect or transform host cells and asprobes to isolate certain related genes in other species and organisms.

BACKGROUND AND INTRODUCTION TO THE INVENTION

Normal hemostasis is the result of a delicate balance between theprocesses of clot formation (blood coagulation) and clot dissolution(fibrinolysis). The complex interactions between blood cells, specificplasma proteins and the vascular surface, maintain the fluidity of bloodunless injury occurs. Damage to the endothelial barrier lining thevascular wall exposes underlying tissue to these blood components. Thisin turn triggers a series of biochemical reactions altering thehemostatic balance in favor of blood coagulation which can either resultin the desired formation of a hemostatic plug stemming the loss of bloodor the undesirable formation of an occlusive intravascular thrombusresulting in reduced or complete lack of blood flow to the affectedorgan.

The blood coagulation response is the culmination of a series ofamplified reactions in which several specific zymogens of serineproteases in plasma are activated by limited proteolysis. This series ofreactions results in the formation of an insoluble matrix composed offibrin and cellular components which is required for the stabilizationof the primary hemostatic plug or thrombus. The initiation andpropagation of the proteolytic activation reactions occurs through aseries of amplified pathways which are localized to membranous surfacesat the site of vascular injury (Mann, K. G., Nesheim, M. E., Church, W.R., Haley, P. and Krishnaswamy, S. (1990) Blood 76: 1-16. and Lawson, J.H., Kalafatis, M., Stram, S., and Mann, K. G. (1994) J. Biol. Chem. 26:23357-23366).

Initiation of the blood coagulation response to vascular injury followsthe formation of a catalytic complex composed of serine protease factorVIIa and the non-enzymatic co-factor, tissue factor (TF) (Rappaport, S.I. and Rao, L. V. M. (1992) Arteriosclerosis and Thrombosis 12:1112-1121). This response appears to be exclusively regulated by theexposure of subendothelial TF to trace circulating levels of factor VIIaand its zymogen factor VII, following a focal breakdown in vascularintegrity. Autoactivation results in an increase in the number of factorVIIa/TF complexes which are responsible for the formation of the serineprotease factor Xa. It is believed that in addition to the factorVIIa/TF complex, the small amount of factor Xa which is formed primesthe coagulation response through the proteolytic modification of factorIX to factor IX_(alpha) which in turn is converted to the active serineprotease factor IXa_(beta) by the factor VIIa/TF complex (Mann, K. G.,Krishnaswamy, S. and Lawson, J. H. (1992) Sem. Hematology 22: 213-226.).It is factor IXa_(beta) in complex with activated factor VIIIa, whichappears to be responsible for the production of significant quantitiesof factor Xa which subsequently catalyzes the penultimate step in theblood coagulation cascade; the formation of the serine proteasethrombin.

Factor Xa catalyzes the formation of thrombin following the assembly ofthe prothrombinase complex which is composed of factor Xa, thenon-enzymatic co-factor Va and the substrate prothrombin (factor II)assembled in most cases, on the surface of activated platelets which areadhered at the site of injury (Fuster, V., Badimon, L., Badimon, J. J.and Chesebro, J. H. (1992) New Engl. J. Med. 326: 310-318). In thearterial vasculature, the resulting amplified "burst" of thrombingeneration catalyzed by prothrombinase causes a high level of thisprotease locally which is responsible for the formation of fibrin andthe further recruitment of additional platelets as well as the covalentstabilization of the clot through the activation of the transglutaminasezymogen factor XIII. In addition, the coagulation response is furtherpropagated through the thrombin-mediated proteolytic feedback activationof the non-enzymatic co-factors V and VIII resulting in moreprothrombinase formation and subsequent thrombin generation (Hemker, H.C. and Kessels, H. (1991) Haemostasis 21: 189-196).

Substances which interfere in the process of blood coagulation(anticoagulants) have been demonstrated to be important therapeuticagents in the treatment and prevention of thrombotic disorders (Kessler,C. M. (1991) Chest 88: 97S-112S and Cairns, J. A., Hirsh, J., Lewis, H.D., Resnekov, L., and Theroux, P. (1992) Chest 102: 456S-481S). Thecurrently approved clinical anticoagulants have been associated with anumber of adverse effects owing to the relatively non-specific nature oftheir effects on the blood coagulation cascade (Levine, M. N., Hirsh,J., Landefeld, S., and Raskob, G. (1992) Chest 102: 352S-363S). This hasstimulated the search for more effective anticoagulant agents which canmore effectively control the activity of the coagulation cascade byselectively interfering with specific reactions in this process whichmay have a positive effect in reducing the complications ofanticoagulant therapy (Weitz, J., and Hirsh, J. (1993) J. Lab. Clin.Med. 122: 364-373). In another aspect, this search has focused on normalhuman proteins which serve as endogenous anticoagulants in controllingthe activity of the blood coagulation cascade. In addition, varioushematophageous organisms have been investigated because of their abilityto effectively anticoagulate the blood meal during and following feedingon their hosts suggesting that they have evolved effective anticoagulantstrategies which may be useful as therapeutic agents.

A plasma protein, Tissue Factor Pathway Inhibitor (TFPI), contains threeconsecutive Kunitz domains and has been reported to inhibit the enzymeactivity of factor Xa directly and, in a factor Xa-dependent manner,inhibit the enzyme activity of the factor VIIa-tissue factor complex.Salvensen, G., and Pizzo, S. V., "Proteinase Inhibitors:α-Macroglobulins, Serpins, and Kunis", "Hemostasis and Thrombosis",Third Edition, pp. 251-253, J. B. Lippincott Company (Edit. R. W. Colmanet al. 1994). A cDNA sequence encoding TFPI has been reported, and thecloned protein was reported to have a molecular weight of 31,950 daltonsand contain 276 amino acids. Broze, G. J. and Girad, T. J., U.S. Pat.No. 5,106,833, col. 1, (1992). Various recombinant proteins derived fromTFPI have been reported. Girad, T. J. and Broze, G. J., EP 439,442(1991); Rasmussen, J. S. and Nordfand, O. J., WO 91/02753 (1991); andBroze, G. J. and Girad, T. J., U.S. Pat. No. 5,106,833, col. 1, (1992).

Antistasin, a protein comprised of 119 amino acids and found in thesalivary gland of the Mexican leech, Haementeria officinalis, has beenreported to inhibit the enzyme activity of factor Xa. Tuszynski et al.,J. Biol. Chem, 262:9718 (1987); Nutt, et al., J. Biol. Chem, 263:10162(1988). A 6,000 daltons recombinant protein containing 58 amino acidswith a high degree homology to antistasin's amino-terminus amino acids 1through 58 has been reported to inhibit the enzyme activity of factorXa. Tung, J. et al., EP 454,372 (Oct. 30, 1991); Tung, J. et al., U.S.Pat. No. 5,189,019 (Feb. 23, 1993).

Tick Anticoagulant Peptide (TAP), a protein comprised of 60 amino acidsand isolated from the soft tick, Ornithodoros moubata, has been reportedto inhibit the enzyme activity of factor Xa but not factor VIIa. Waxman,L. et al., Science, 248:593 (1990). TAP made by recombinant methods hasbeen reported. Vlausk, G. P. et al., EP 419,099 (1991) and Vlausk, G. P.et al., U.S. Pat. No. 5,239,058 (1993).

The dog hookworm, Ancylostoma caninum, which can also infect humans, hasbeen reported to contain a potent anticoagulant substance whichinhibited coagulation of blood in vitro. Loeb, L. and Smith, A. J.,Proc. Pathol. Soc. Philadelphia, 7:173-187 (1904). Extracts of A.caninum were reported to prolong prothrombin time and partialthromboplastin time in human plasma with the anticoagulant effect beingreported attributable to inhibition of factor Xa but not thrombin.Spellman, Jr., J. J. and Nossel, H. L., Am. J. Physiol., 220:922-927(1971). More recently, soluble protein extracts of A. caninum werereported to prolong prothrombin time and partial thromboplantin time inhuman plasma in vitro. The anticoagulant effect was reported to beattributable to inhibition of human factor Xa but not thrombin,Cappello, M, et al., J. Infect. Diseases, 167:1474-1477 (1993), and toinhibition of factor Xa and factor VIIa (WO94/25000; U.S. Pat. No.5,427,937).

The human hookworm, Ancylostoma ceylanicum, has also been reported tocontain an anticoagulant. Extracts of A. ceylanicum have been reportedto prolong prothrombin time and partial thromboplastin time in dog andhuman plasma in vitro. Carroll, S. M., et al., Thromb. Haemostas.(Stuttgart), 51:222-227 (1984).

Soluble extracts of the non-hematophagous parasite, Ascaris suum, havebeen reported to contain an anticoagulant. These extracts were reportedto prolong the clotting of whole blood, as well as clotting time in thekaolin-activated partial thromboplastin time test but not in theprothrombin time test. Crawford, G. P. M. et al., J. Parasitol., 68:1044-1047 (1982). Chymotrypsin/elastase inhibitor-1 and its majorisoforms, trypsin inhibitor-I and chymotrypsin/elastase inhibitor-4,isolated from Ascaris suum, were reported to be serine proteaseinhibitors and share a common pattern of five-disulfide bridges.Bernard, V. D. and Peanasky, R. J., Arch. Biochem. Biophys., 303:367-376(1993); Huang, K. et al., Structure, 2:679-689 (1994); and Grasberger,B. L. et al., Structure, 2:669-678 (1994). There was no indication thatthe reported serine protease inhibitors had anticoagulant activity.

Secretions of the hookworm Necator americanus are reported to prolonghuman plasma clotting times, inhibit the amidolytic activity of humanFXa using a fluorogenic substrate, inhibit multiple agonist-inducedplatelet dense granule release, and degrade fibrinogen. Pritchard, D. I.and B. Furmidge, Thromb. Haemost. 73: 546 (1995) (WO95/12615).

SUMMARY OF THE INVENTION

The present invention is directed to isolated proteins having serineprotease inhibiting activity and/or anticoagulant activity and includingat least one NAP domain. We refer to these proteins asNematode-extracted Anticoagulant Proteins or "NAPs". "NAP domain" refersto a sequence of the isolated protein, or NAP, believed to have theinhibitory activity, as further defined herein below. The anticoagulantactivity of these proteins may be assessed by their activities inincreasing clotting time of human plasma in the prothrombin time (PT)and activated partial thromboplastin time (aPTT) assays, as well as bytheir ability to inhibit the blood coagulation enzymes factor Xa orfactor VIIa/TF. It is believed that the NAP domain is responsible forthe observed anticoagulant activity of these proteins. Certain of theseproteins have at least one NAP domain which is an amino acid sequencecontaining less than about 120 amino acid residues, and including 10cysteine amino acid residues.

In another aspect, the present invention is directed to a method ofpreparing and isolating a cDNA molecule encoding a protein exhibitinganticoagulant activity and having a NAP domain, and to a recombinantcDNA molecule made by this method. This method comprises the steps of:(a) constructing a cDNA library from a species of nematode; (b) ligatingsaid cDNA library into an appropriate cloning vector; (c) introducingsaid cloning vector containing said cDNA library into an appropriatehost cell; (d) contacting the cDNA molecules of said host cell with asolution containing a hybridization probe having a nucleic acid sequencecomprising AAR GCi TAY CCi GAR TGY GGi GAR AAY GAR TGG, [SEQ. ID. NO.94] wherein R is A or G, Y is T or C, and i is inosine; (e) detecting arecombinant cDNA molecule which hybridizes to said probe; and (f)isolating said recombinant cDNA molecule.

In another aspect, the present invention is directed to a method ofmaking a recombinant protein encoded by said cDNA which hasanticoagulant activity and which includes a NAP domain and torecombinant proteins made by this method. This method comprises thesteps of: (a) constructing a cDNA library from a species of nematode;(b) ligating said cDNA library into an appropriate cloning vector; (c)introducing said cloning vector containing said cDNA library into anappropriate host cell; (d) contacting the cDNA molecules of said hostcell with a solution containing a hybridization probe having a nucleicacid sequence comprising AAR GCi TAY CCi GAR TGY GGi GAR AAY GAR TGG,wherein R is A or G, Y is T or C, and i is inosine [SEQ. ID. NO. 94];(e) detecting a recombinant cDNA molecule which hybridizes to saidprobe; (f) isolating said recombinant cDNA molecule; (g) ligating thenucleic acid sequence of said cDNA molecule which encodes saidrecombinant protein into an appropriate expression cloning vector; (h)transforming a second host cell with said expression cloning vectorcontaining said nucleic acid sequence of said cDNA molecule whichencodes said recombinant protein; (i) culturing the transformed secondhost cell; and (j) isolating said recombinant protein expressed by saidsecond host cell. It is noted that when describing production ofrecombinant proteins in certain expression systems such as COS cells,the term "transfection" is conventionally used in place of (andsometimes interchangeably with) "transformation".

In another aspect, the present invention is directed to a method ofmaking a recombinant cDNA encoding a recombinant protein havinganticoagulant activity and having a NAP domain, comprising the steps of:(a) isolating a cDNA library from a nematode; (b) ligating said cDNAlibrary into a cloning vector; (c) introducing said cloning vectorcontaining said cDNA library into a host cell; (d) contacting the cDNAmolecules of said host cells with a solution comprising first and secondhybridization probes, wherein said first hybridization probe has thenucleic acid sequence comprising AAG GCA TAC CCG GAG TGT GGT GAG AAT GAATGG CTC GAC GAC TGT GGA ACT CAG AAG CCA TGC GAG GCC AAG TGC AAT GAG GAACCC CCT GAG GAG GAA GAT CCG ATA TGC CGC TCA CGT GGT TGT TTA TTA CCT CCTGCT TGC GTA TGC AAA GAC GGA TTC TAC AGA GAC ACG GTG ATC GGC GAC TGT GTTAGG GAA GAA GAA TGC GAC CAA CAT GAG ATT ATA CAT GTC TGA [SEQ. ID. NO.1], and said second hybridization probe has the nucleic acid sequencecomprising AAG GCA TAC CCG GAG TGT GGT GAG AAT GAA TGG CTC GAC GTC TGTGGA ACT AAG AAG CCA TGC GAG GCC AAG TGC AGT GAG GAA GAG GAG GAA GAT CCGATA TGC CGA TCA TTT TCT TGT CCG GGT CCC GCT GCT TGC GTA TGC GAA GAC GGATTC TAC AGA GAC ACG GTG ATC GGC GAC TGT GTT AAG GAA GAA GAA TGC GAC CAACAT GAG ATT ATA CAT GTC TGA [SEQ. ID. NO. 2]; (e) detecting arecombinant cDNA molecule which hybridizes to said mixture of saidprobes; and (f) isolating said recombinant cDNA molecule.

In yet another aspect, the present invention is directed to a method ofmaking a recombinant cDNA encoding a protein having anticoagulantactivity and which encodes a NAP domain, comprising the steps of: (a)isolating a cDNA library from a nematode; (b) ligating said cDNA libraryinto an appropriate phagemid expression cloning vector; (c) transforminghost cells with said vector containing said cDNA library; (d) culturingsaid host cells; (e) infecting said host cells with a helper phage; (f)separating phage containing said cDNA library from said host cells; (g)combining a solution of said phage containing said cDNA library with asolution of biotinylated human factor Xa; (h) contacting astreptavidin-coated solid phase with said solution containing saidphages containing said cDNA library, and said biotinylated human factorXa; (i) isolating phages which bind to said streptavidin-coated solidphase; and (j) isolating the recombinant cDNA molecule from phages whichbind to said streptavidin-coated solid phase.

In one preferred aspect, the present invention is directed to arecombinant cDNA having a nucleic acid sequence selected from thenucleic acid sequences depicted in FIG. 1, FIG. 3, FIGS. 7A to 7F, FIG.9, FIGS. 13A to 13H, and FIG. 14.

The present invention also is directed to NAPs that inhibit thecatalytic activity of FXa, to NAPs that inhibit the catalytic activityof the FVIIa/TF complex, and to NAPs that inhibit the catalytic activityof a serine protease, as well as nucleic acids encoding such NAPs andtheir methods of use.

Definitions

The term "amino acid" refers to the natural L-amino acids; D-amino acidsare included to the extent that a protein including such D-amino acidsretains biological activity. Natural L-amino acids include alanine(Ala), arginine (Arg), asparagine (Asn), aspartic acid (Asp), cysteine(Cys), glutamine (Gln), glutamic acid (Glu), glycine (Gly), histidine(His), isoleucine (Ile), leucine (Leu), lysine (Lys), methionine (Met),phenylalanine (Phe), proline (Pro), serine (Ser), threonine (Thr),tryptophan (Trp), tyrosine (Tyr) and valine (Val).

The term "amino acid residue" refers to radicals having the structure:(1) --NH--CH(R)C(═O)--, wherein R is the alpha-carbon side-chain groupof an L-amino acid, except for L-proline; or (2) ##STR1## for L-proline.

The term "peptide" refers to a sequence of amino acids linked togetherthrough their alpha-amino and carboxylate groups by peptide bonds. Suchsequences as shown herein are presented in the amino to carboxydirection, from left to right.

The term "protein" refers to a molecule comprised of one or morepeptides.

The term "cDNA" refers to complementary DNA.

The term "nucleic acid" refers to polymers in which bases (e.g., purinesor pyrimidines) are attached to a sugar phosphate backbone. Nucleicacids include DNA and RNA.

The term "nucleic acid sequence" refers to the sequence of nucleotidescomprising a nucleic acid. Such sequences as shown herein are presentedin the 5' to 3' direction, from left to right.

The term "recombinant DNA molecule" refers to a DNA molecule created byligating together pieces of DNA that are not normally contiguous.

The term "mRNA" refers to messenger ribonucleic acid.

The term "homology" refers to the degree of similarity of DNA or peptidesequences.

The terms "Factor Xa" or "fXa" or "FXa" are synonymous and are commonlyknown to mean a serine protease within the blood coagulation cascade ofenzymes that functions as part of the prothrombinase complex to form theenzyme thrombin.

The phrase "Factor Xa inhibitory activity" means an activity thatinhibits the catalytic activity of fXa toward its substrate.

The phrase "Factor Xa selective inhibitory activity" means inhibitoryactivity that is selective toward Factor Xa compared to other relatedenzymes, such as other serine proteases.

The phrase "Factor Xa inhibitor" is a compound having Factor Xainhibitory activity.

The terms "Factor VIIa/Tissue Factor" or "fVIIa/TF" or "FVIIa/TF" aresynonymous and are commonly known to mean a catalytically active complexof the serine protease coagulation factor VIIa (fVIIa) and thenon-enzymatic protein Tissue Factor (TF), wherein the complex isassembled on the surface of a phospholipid membrane of definedcomposition.

The phrase "fVIIa/TF inhibitory activity" means an activity thatinhibits the catalytic activity of the fVIIa/TF complex in the presenceof fXa or catalytically inactive fXa derivative.

The phrase "fVIIa/TF selective inhibitory activity" means fVIIa/TFinhibitory activity that is selective toward fVIIa/TF compared to otherrelated enzymes, such as other serine proteases, including FVIIa andfXa.

The phrase a "fVIIa/TF inhibitor" is a compound having fVIIa/TFinhibitory activity in the presence of fXa or catalytically inactive fXaderivatives.

The phrase "serine protease" is commonly known to mean an enzyme,comprising a triad of the amino acids histidine, aspartic acid andserine, that catalytically cleaves an amide bond, wherein the serineresidue within the triad is involved in a covalent manner in thecatalytic cleavage. Serine proteases are rendered catalytically inactiveby covalent modification of the serine residue within the catalytictriad by diisopropylfluorophosphate (DFP).

The phrase "serine protease inhibitory activity" means an activity thatinhibits the catalytic activity of a serine protease.

The phrase "serine protease selective inhibitory activity" meansinhibitory activity that is selective toward one serine proteasecompared to other serine proteases.

The phrase "serine protease inhibitor" is a compound having serineprotease inhibitory activity.

The term "prothrombinase" is commonly known to mean a catalyticallyactive complex of the serine protease coagulation Factor Xa (fXa) andthe non-enzymatic protein Factor Va (fVa), wherein the complex isassembled on the surface of a phospholipid membrane of definedcomposition.

The phrase "anticoagulant activity" means an activity that inhibits theclotting of blood, which includes the clotting of plasma.

The term "selective", "selectivity", and permutations thereof, whenreferring to NAP activity toward a certain enzyme, mean the NAP inhibitsthe specified enzyme with at least 10-fold higher potency than itinhibits other, related enzymes. Thus, the NAP activity is selectivetoward that specified enzyme.

The term "substantially the same" when used to refer to proteins, aminoacid sequences, cDNAs, nucleotide sequences and the like refers toproteins, cDNAs or sequences having at least about 90% homology with theother protein, cDNA, or sequence.

The term "NAP" or "NAP protein" means an isolated protein which includesat least one NAP domain and having serine protease inhibitory activityand/or anticoagulant activity.

BRIEF DESCRIPTION OF THE DRAWINGS

FIG. 1 depicts the nucleotide sequence of the AcaNAP5 cDNA [SEQ. ID. NO.3]. The numbering starts at the first nucleotide of the cDNA.Translation starts at the first ATG codon (position 14); a second inframe ATG is present at position 20.

FIG. 2 depicts the amino acid sequence of mature AcaNAP5 [SEQ. ID. NO.4].

FIG. 3 depicts the nucleotide sequence of the AcaNAP6 cDNA [SEQ. ID. NO.5]. The numbering starts at the first nucleotide of the cDNA.Translation starts at the first ATG codon (position 14); a second inframe ATG is present at position 20.

FIG. 4 depicts the amino acid sequence of mature AcaNAP6 [SEQ. ID. NO.6]. Amino acids that differ from AcaNAPS are underlined. In addition tothese amino acid substitutions, AcaNAP6 contains a two amino aciddeletion (Pro-Pro) when compared to AcaNAP5.

FIG. 5 depicts the amino acid sequence of Pro-AcaNAP5 [SEQ. ID. NO. 7].

FIG. 6 depicts the amino acid sequence of Pro-AcaNAP6 [SEQ. ID. NO. 8].Amino acids that differ from Pro-AcaNAP5 are underlined. In addition tothese amino acid substitutions, Pro-AcaNAP6 contains a two amino aciddeletion (Pro-Pro) when compared to Pro-AcaNAP5.

FIGS. 7A through 7F depict the nucleotide sequences of the cDNAs anddeduced amino acid sequences of certain NAP proteins isolated fromAncylostoma ceylanicum, Ancylostoma duodenale, and Heligmosomoidespolygyrus. FIG. 7A depicts sequences for the recombinant cDNA molecule,AceNAP4, isolated from Ancylostoma ceylanicum [SEQ. ID. NO. 9]. FIG. 7Bdepicts sequences for the recombinant cDNA molecule, AceNAP5, isolatedfrom Ancylostoma ceylanicum [SEQ. ID. NO. 10]. FIG. 7C depicts sequencesfor the recombinant cDNA molecule, AceNAP7, isolated from Ancylostomaceylanicum [SEQ. ID. NO. 11]. FIG. 7D depicts sequences for therecombinant cDNA molecule, AduNAP4, isolated from Ancylostoma duodenale[SEQ. ID. NO. 12]. FIG. 7E depicts sequences for the recombinant cDNAmolecule, AduNAP7, isolated from Ancylostoma duodenale [SEQ. ID. NO.131. FIG. 7F depicts sequences for the recombinant cDNA molecule,HpoNAP5, isolated from Heligmosomoides polygyrus [SEQ. ID. NO. 14]. TheEcoRI site, corresponding to the 5'-end of the recombinant cDNAmolecule, is indicated in all cases (underlined). Numbering of eachsequence starts at this EcoRI site. AceNAP4 and AduNAP7, each encode aprotein which has two NAP domains; all other clones in this Figure codefor a protein having a single NAP domain. The AduNAP4 cDNA clone is notfull-length, i.e., the recombinant cDNA molecule lacks the 5'-terminalpart of the coding region based on comparison with other isoforms.

FIGS. 8A through 8C depict the nucleotide sequence of the vectors,pDONG61 (FIG. 8A) [SEQ. ID. NO. 15], pDONG62 (FIG. 8B) [SEQ. ID. NO.16], and pDONG63 (FIG. 8C) [SEQ. ID. NO. 17]. The HindIII-BamHI fragmentwhich is shown is located between the HindIII and BamHI sites of pUC119.The vectors allow the cloning of cDNAs, as SfiI-NotI fragments, in thethree different reading frames downstream of the filamentous phage gene6. All relevant restriction sites are indicated. The AAA Lys-encodingtriplet at position 373-375 is the last codon of gene 6. The gene 6encoded protein is followed by a Gly-Gly-Gly-Ser-Gly-Gly [SEQ. ID. NO.18] linker sequence.

FIG. 9 depicts the nucleotide sequence of the recombinant cDNA molecule,AcaNAPc2 cDNA [SEQ. ID. NO. 19]. The EcoRI site, corresponding to the5'-end of the cDNA, is indicated (underlined). Numbering starts at thisEcoRI site. The deduced amino acid sequence is also shown; thetranslational reading frame was determined by the gene 6 fusion partner.The AcaNAPc2 cDNA lacks a portion of the 5'-terminal part of the codingregion; the homology with AcaNAP5 and AcaNAP6 predicts that the firstseven amino acid residues belong to the secretion signal.

FIGS. 10A and 10B depict the comparative effects of certain NAP proteinson the prothrombin time (PT) measurement (FIG. 10A) and the activatedpartial thromboplastin time (aPTT) (FIG. 10B) of normal citrated humanplasma. Solid circles, (), represent Pro-AcaNAP5; open triangles, (Δ),represent AcaNAP5 (AcaNAP5^(a) in Table 2); and open circles, (∘),represent native AcaNAP5.

FIG. 11 depicts the alignment of the amino acid sequences encoded bycertain NAP cDNAs isolated from various nematodes. AcaNAP5 [SEQ. ID. NO.20], AcaNAP6 [SEQ. ID. NO. 21], and AcaNAPc2 [SEQ. ID. NO. 128] wereisolated from Ancylostoma caninum. AceNAP5 [SEQ. ID. NO. 22], AceNAP7[SEQ. ID. NO. 23], and AceNAP4 (AceNAP4d1 [SEQ. ID. NO. 24] andAceNAP4d2 [SEQ. ID. NO. 25) were isolated from Ancylostoma ceylanicum.AduNAP4 [SEQ. ID. NO. 26] and AduNAP7 (AduNAP7d1 (SEQ. ID. NO. 27] andAduNAP7d2 [SEQ. ID. NO. 28]) were isolated from Ancylostoma duodenale.HpoNAP5 [SEQ. ID. NO. 29] was isolated from Heligmosomoides polygyrus.The amino acid sequences shown in this figure are as given in FIGS. 1,3, 7A through 7F, and 9. The sequences of mature AcaNAP5 [SEQ. ID. NO.4] and AcaNAP6 [SEQ. ID. NO. 6] (see FIGS. 2 and 4) are characterized,in part, by ten cysteine residues (numbered one through ten and shown inbold). All of the amino acid sequences in this Figure contain at leastone NAP domain. The AceNAP4 cDNA consists of two adjacent regions, namedAceNAP4d1 [SEQ. ID. NO. 24] and AceNAP4d2 [SEQ. ID. NO. 25], whichencode a first (d1) and second (d2) NAP-domain; similarly, the AduNAP7cDNA contains two adjacent regions, AduNAP7d1 [SEQ. ID. NO. 27] andAduNAP7d2 [SEQ. ID. NO. 28], encoding a first (d1) and second (d2)NAP-domain. The alignment of the amino acid sequences of all NAP-domainsis guided by the cysteines; dashes (---) were introduced at certainpositions to maintain the cysteine alignment and indicate the absence ofan amino acid at that position. The carboxy-terminal residue of a cDNAencoded protein is followed by the word "ends".

FIGS. 12A and 12B depict a map of the P. pastoris pYAM7SP8expression/secretion vector (FIG. 12A) and sequences included in thevector (FIG. 12B) [SEQ. ID. NO. 30]. As depicted in FIG. 12A, thisplasmid contains the following elements inserted between themethanol-induced AOX1 promoter (dark arrow in the 5'AOX untranslatedregion) and the AOX1 transcription termination signal (3'T): a syntheticDNA fragment encoding the acid phosphatase secretion signal (S), asynthetic 19-amino acid pro sequence (P) ending with a Lys-Argprocessing site for the KEX2 protease and a multicloning site. The HIS4gene which serves as a selection marker in GS115 transformation wasmodified by site directed mutagenesis to eliminate the Stu1 recognitionsequence (HIS4*). pBR322 sequences, including the Bla gene and origin(ori) for propagation in E. coli are represented by a single line. FIG.12B depicts the following contiguous DNA sequences which areincorporated in pYAM7SP8: the acid phosphatase (PHO1) secretion signalsequence, pro sequence and multicloning site (MCS) sequence. The ATGstart codon of the PHO1 secretion signal is underlined.

FIGS. 13A through 13H depict the nucleotide sequences of the cDNAs anddeduced amino acid sequences of certain NAP proteins isolated fromAncylostoma caninum. FIG. 13A depicts sequences for the recombinant cDNAmolecule AcaNAP23 [SEQ. ID. NO. 31]. FIG. 13B depicts sequences for therecombinant cDNA molecule AcaNAP24 [SEQ. ID. NO. 32]. FIG. 13C depictssequences for the recombinant cDNA molecule AcaNAP25 [SEQ. ID. NO. 33].FIG. 13D depicts sequences for the recombinant cDNA molecules AcaNAP31,AcaNAP42, and AcaNAP46, all of which are identical [SEQ. ID. NO. 34].FIG. 13E depicts sequences for the recombinant cDNA molecule AcaNAP44[SEQ. ID. NO. 35]. FIG. 13F depicts sequences for the recombinant cDNAmolecule AcaNAP45 [SEQ. ID. NO. 36]. FIG. 13G depicts sequences for therecombinant cDNA molecule AcaNAP47 [SEQ. ID. NO. 37]. FIG. 13H depictssequences for the recombinant cDNA molecule AcaNAP48 [SEQ. ID. NO. 38].The EcoRI site, corresponding to the 5'-end of the recombinant cDNAmolecule, is indicated in all cases (underlined). Numbering of eachsequence starts at this EcoRI site. AcaNAP45 and AcaNAP47, each encode aprotein which has two NAP domains; all other clones in this Figure codefor a protein having a single NAP domain.

FIG. 14 depicts the nucleotide, and deduced amino acid, sequence of therecombinant cDNA molecule NamNAP [SEQ. ID. NO. 39].

FIG. 15 presents the antithrombotic activity of AcaNAP5 and LowMolecular Weight Heparin (LMWH; Enoxaparin™) evaluated in the FeCl₃model of arterial thrombosis. Activity data is represented as thepercent incidence of occlusive thrombus formation in the carotid artery(circles). Thrombus formation began 150 minutes after subcutaneous(s.c.) administration of test agent. Deep wound bleeding was quantifiedin a separate group of animals that were treated in an identical mannerbut without addition of FeCl₃ (squares). Blood loss at a deep surgicalwound in the neck was quantified over a total of 210 minutes aftersubcutaneous compound administration.

FIG. 16 presents the alignment of amino acid sequences corresponding tomature NAPs isolated according to the procedures disclosed herein:namely AcaNAP5 [SEQ. ID. NO. 40], AcaNAP6 [SEQ. ID. NO. 41], AcaNAP48[SEQ. ID. NO. 42], AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24 [SEQ. ID. NO.44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ. ID. NO. 46], AcaNAP31,42, 46 [SEQ. ID. NO. 47], AceNAP4d1 [SEQ. ID. NO. 48], AceNAP4d2 [SEQ.ID. NO. 49], AcaNAP45d1 [SEQ. ID. NO. 50], AcaNAP47d1 [SEQ. ID. NO. 51],AduNAP7d1 [SEQ. ID. NO. 52], AcaNAP45d2 [SEQ. ID. NO. 53], AcaNAP47d2[SEQ. ID. NO. 54], AduNAP4 [SEQ. ID. NO. 55], AduNAP7d2 [SEQ. ID. NO.56], AceNAP5 [SEQ. ID. NO. 57], AceNAP7 [SEQ. ID. NO. 58], AcaNAPc2[SEQ. ID. NO. 59], HpoNAP5 [SEQ. ID. NO. 60], and NamNAP [SEQ. ID. NO.61]. Each NAP domain comprises ten cysteine residues, which are used toalign the sequences, and amino acid sequences between the cysteines. A1through A10 represent the amino acid sequences between the cysteineresidues.

FIG. 17 depicts the amino acid sequence of mature AceNAP4 [SEQ. ID. NO.62] having two NAP domains.

FIG. 18 depicts the amino acid sequence of mature AcaNAP45 [SEQ. ID. NO.63] having two NAP domains.

FIG. 19 depicts the amino acid sequence of mature AcaNAP47 [SEQ. ID. NO.64] having two NAP domains.

FIG. 20 depicts the amino acid sequence for mature AduNAP7 [SEQ. ID. NO.65] having two NAP domains.

DETAILED DESCRIPTION OF THE INVENTION

This invention provides a family of proteins, collectively referred toas Nematode-extracted Anticoagulant Proteins (NAPs). These proteins areso designated because the first member originally isolated was extractedfrom a nematode, the canine hookworm, Ancyclostoma caninum. However, thedesignation NAP or NAP domain should not be considered to limit theproteins of the present invention by this or other natural source.

Individual NAP proteins are characterized by having at least one NAPdomain and by having serine protease inhibitory and/or anticoagulantactivity. Such anticoagulant activity may be assessed by increases inclotting time in both the PT and aPTT assays described herein, by theinhibition of factor Xa or factor VIIa/TF activity, or by demonstrationof activity in vivo. Preferably, blood or plasma used in such assaysderives from species known to be infected by nematodes, such as pigs,humans, primates, and the like. The NAP domain is an amino acidsequence. It is believed that the NAP domain is responsible for theobserved inhibitory and/or anticoagulant activity. Certainrepresentative NAP domains include the amino acid sequences depicted inFIGS. 11 and 16, particularly the sequences between the cysteinesdesignated as Cysteine 1 and Cysteine 10 in the Figures and the sequencefollowing Cysteine 10. The characteristics broadly defining this familyof proteins, as well as the nucleic acid molecules, including mRNAssequences and DNA sequences which encode such proteins, are provided.Methods of making these proteins, as well as methods of making nucleicacid molecules encoding such proteins, are also provided. The specificexamples provided are exemplary only and other members of the NAP familyof proteins, as well as nucleic acid sequences encoding them, can beobtained by following the procedures outlined in these examples anddescribed herein.

The proteins of the present invention include isolated NAPs whichcomprise proteins having anticoagulant activity and including at leastone NAP domain.

With respect to "anticoagulant activity", the purified proteins of thepresent invention are active as anticoagulants, and as such, arecharacterized by inhibiting the clotting of blood which includes theclotting of plasma. In one aspect, the preferred isolated proteins ofthe present invention include those which increase the clotting time ofhuman plasma as measured in both the prothrombin time (PT) and activatedpartial thromboplastin time (aPTT) assays.

In the PT assay, clotting is initiated by the addition of a fixed amountof tissue factor-phospholipid micelle complex (thromboplastin) to humanplasma. Anticoagulants interfere with certain interactions on thesurface of this complex and increase the time required to achieveclotting relative to the clotting observed in the absence of theanticoagulant. The measurement of PT is particularly relevant forassessing NAP anticoagulant activity because the series of specificbiochemical events required to cause clotting in this assay are similarto those that must be overcome by the hookworm in nature to facilitatefeeding. Thus, the ability of NAP to act as an inhibitor in this assaycan parallel its activity in nature, and is predictive of anticoagulantactivity in vivo. In both the assay and in nature, the coagulationresponse is initiated by the formation of a binary complex of the serineprotease factor VIIa (fVIIa) and the protein tissue factor (TF)(fVIIa/TF), resulting in the generation of fXa. The subsequent assemblyof fXa into the prothrombinase complex is the key event responsible forthe formation of thrombin and eventual clot formation.

In the aPTT assay, clotting is initiated by the addition of a certainfixed amount of negatively charged phospholipid micelle (activator) tothe human plasma. Substances acting as anticoagulants will interferewith certain interactions on the surface of the complex and againincrease the time to achieve a certain amount of clotting relative tothat observed in the absence of the anticoagulant. Example B describessuch PT and aPTT assays. These assays can be used to assessanticoagulant activity of the isolated NAPs of the present invention.

The preferred isolated NAPs of the present invention include those whichdouble the clotting time of human plasma in the PT assay when present ata concentration of about 1 to about 500 nanomolar and which also doublethe clotting time of human plasma in the aPTT assay when present at aconcentration of about 1 to about 500 nanomolar. Especially preferredare those proteins which double the clotting time of human plasma in thePT assay when present at a concentration of about 5 to about 100nanomolar, and which also double the clotting time of human plasma inthe aPTT assay when present at a concentration of about 5 to about 200nanomolar. More especially preferred are those proteins which double theclotting time of human plasma in the PT assay when present at aconcentration about 10 to about 50 nanomolar, and which also double theclotting time of human plasma in the aPTT assay when present at aconcentration of about 10 to about 100 nanomolar.

Anticoagulant, or antithrombotic, activity of NAPs of the presentinvention also can be evaluated using the in vivo models presented inExample F. The rat FeCl₃ model described in part A of that Example is amodel of platelet dependent, arterial thrombosis that is commonly usedto assess antithrombotic compounds. The model evaluates the ability of atest compound to prevent the formation of an occlusive thrombus inducedby FeCl₃ in a segment of the rat carotid artery. NAPs of the presentinvention are effective anticoagulants in this model when administeredintravenously or subcutaneously. The deep wound bleeding assay describedin part B of Example F allows measurement of blood loss afteradministration of an anticoagulant compound. A desired effect of ananticoagulant is that it inhibits blood coagulation, or thrombusformation, but not so much as to prevent clotting altogether and therebypotentiate bleeding. Thus, the deep wound bleeding assay measures theamount of blood loss over the 3.5 hour period after administration ofanticoagulant. The data presented in FIG. 15 show NAP of the presentinvention to be an effective antithrombotic compound at a dose that doesnot cause excessive bleeding. In contrast, the dose of low molecularweight heparin (LMWH) that correlated with 0% occlusion caused aboutthree times more bleeding than the effective dose of NAP.

General NAP Domain [FORMULA I]

With respect to "NAP domain", the isolated proteins (or NAPs) of thepresent invention include at least one NAP domain in their amino acidsequence. Certain NAP domains have an amino acid sequence having amolecular weight of about 5.0 to 10.0 kilodaltons, preferably from about7.0 to 10.0 kilodaltons, and containing 10 cysteine amino acid residues.

Certain preferred isolated NAPs of the present invention include thosewhich contain at least one NAP domain, wherein each such NAP domain isfurther characterized by including the amino acid sequence: Cys-A₁-Cys-A₂ -Cys-A₃ -Cys-A₄ -Cys-A₅ -Cys-A₆ -Cys-A₇ -Cys-A₈ -Cys-A₉ -Cys("FORMULA I"), wherein: (a) A₁ is an amino acid sequence containing 7 to8 amino acid residues; (b) A₂ is an amino acid sequence containing 2 to5 amino acid residues; (c) A₃ is an amino acid sequence containing 3amino acid residues; (d) A₄ is an amino acid sequence containing 6 to 17amino acid residues; (e) A₅ is an amino acid sequence containing 3 to 4amino acid-residues; (f) A₆ is an amino acid sequence containing 3 to 5amino acid residues; (g) A₇ is an amino acid residue; (h) A₈ is an aminoacid sequence containing 10 to 12 amino acid residues; and (i) A₉ is anamino acid sequence containing 5 to 6 amino acid residues. Other NAPshaving slightly different NAP domains (See FORMULAS II to V) areencompassed within the present invention.

Especially preferred NAP domains include those wherein A₂ is an aminoacid sequence containing 4 to 5 amino acid residues and A₄ is an aminoacid sequence containing 6 to 16 amino acid residues. More preferred areNAP domains wherein: (a) A₁ has Glu as its fourth amino acid residue;(b) A₂ has Gly as its first amino acid residue; (c) A₈ has Gly as itsthird amino acid residue and Arg as its sixth amino acid residue; and(d) A₉ has Val as its first amino acid residue. More preferably, A₃ hasAsp or Glu as its first amino acid residue and Lys or Arg as its thirdamino acid residue and A₇ is Val or Gln. Also, more preferably A₈ hasLeu or Phe as its fourth amino acid residue and Lys or Tyr as its fifthamino acid residue. Also preferred are NAP domains where, when A₈ has 11or 12 amino acid residues, Asp or Gly is its penultimate amino acidresidue, and, where when A₈ has 10 amino acids, Gly is its tenth aminoacid residue. For expression of recombinant protein in certainexpression systems, a recombinant NAP may additionally include an aminoacid sequence for an appropriate secretion signal. Certainrepresentative NAP domains include the sequences depicted in FIG. 11 andFIG. 16, particularly the sequences between (and including) thecysteines designated as Cysteine 1 and Cysteine 10 and followingCysteine 10.

According to a preferred aspect, provided are NAPs which include atleast one NAP domain of Formula I wherein the NAP domain includes theamino acid sequence: Cys-A1-Cys-A2-Cys -A3-Cys -A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys wherein (a) Cys-A1 is selected fromSEQ. ID. NOS. 66 and 129; (b) Cys-A2-Cys is selected from one of SEQ.ID. NOS. 130 to 133; (c) A3-Cys-A4 is selected from one of SEQ. ID. NOS.134 to 145; (d) Cys-A5 is selected from SEQ. ID. NOS. 146 and 147; (e)Cys-A6 is selected from one of SEQ. ID. NOS. 148 to 150; (f)Cys-A7-Cys-A8 is selected from one of SEQ. ID. NOS. 151 to 153; and (g)Cys-A9-Cys is selected from SEQ. ID. NOS. 154 and 155. Also preferredare such proteins wherein Cys-A2-Cys is selected from SEQ. ID. NOS. 130and 131 and A3-Cys-A4 is selected from one of SEQ. ID. NOS. 135 to 145.More preferred are those proteins having NAP domains wherein SEQ. ID.NOS. 66 and 129 have Glu at location 5; SEQ. ID. NOS. 130 and 131 haveGly at location 2; SEQ. ID. NOS. 151 to 153 have Gly at location 6 andArg at location 9; and SEQ. ID. NOS. 154 and 155 have Val at location 2.More preferably SEQ. ID. NOS. 151 to 153 have Val or Glu at location 2,Leu or Phe at location 7 and/or Lys or Tyr at location 8. It is furtherpreferred that SEQ. ID. NO. 151 has Asp or Gly at location 14; SEQ. ID.NO. 152 has Asp or Gly at location 13; and SEQ. ID. NO. 153 has Gly atlocation 13.

Certain NAPs of the present invention demonstrate specificity towardinhibiting a particular component in the coagulation cascade, such asfXa or the fVIIa/TF complex. The specificity of a NAP's inhibitoryactivity toward a component in the coagualtion cascade can be evaluatedusing the protocol in Example D. There, the ability of a NAP to inhibitthe activity of a variety of serine proteases involved in coagulation ismeasured and compared. The ability of a NAP to inhibit the fVIIa/TFcomplex also can be assessed using the protocols in Example E, whichmeasure the ability of a NAP to bind fXa in either an inhibitory ornoninhibitory manner and to inhibit FVIIa when complexed with TF.AcaNAP5 and AcaNAP6 are examples of proteins having NAP domains thatspecifically inhibit fXa. AcaNAPc2 is a protein having a NAP domain thatdemonstrates selective inhibition of the fVIIa/TF complex when fXa, or acatalytically active or inactive derivative thereof, is present.

NAPs Having Anticoagulant Activity, Including NAPs Having Factor XaInhibitory Activity (FORMULA II)

Thus, in one aspect NAPs of the present invention also include anisolated protein having anticoagulant activity, including an isolatedprotein having Factor Xa inhibitory activity, and having one or more NAPdomains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10("FORMULA II"),

wherein

(a) A1 is an amino acid sequence of 7 to 8 amino acid residues;

(b) A2 is an amino acid sequence;

(c) A3 is an amino acid sequence of 3 amino acid residues;

(d) A4 is an amino acid sequence;

(e) A5 is an amino acid sequence of 3 to 4 amino acid residues;

(f) A6 is an amino acid sequence;

(g) A7 is an amino acid;

(h) A8 is an amino acid sequence of 11 to 12 amino acid residues;

(i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and

(j) A10 is an amino acid sequence;

wherein each of A2, A4, A6 and A10 has an independently selected numberof independently selected amino acid residues and each sequence isselected such that each NAP domain has in total less than about 120amino acid residues.

Pharmaceutical compositions comprising NAP proteins according to thisaspect, and methods of inhibiting blood coagulation comprisingadministering NAP proteins according to this aspect also arecontemplated by this invention.

NAP proteins within this aspect of the invention have at least one NAPdomain. Preferred are NAPs having one or two NAP domains. NAP proteinsAcaNAP5 [SEQ. ID. NOS. 4 and 40] and AcaNAP6 [SEQ. ID. NOS. 6 and 41]have one NAP domain and are preferred NAPs according to this aspect ofthe invention.

Preferred NAP proteins according to one embodiment of this aspect of theinvention are those in which A2 is an amino acid sequence of 3 to 5amino acid residues, A4 is an amino acid sequence of 6 to 19 amino acidresidues, A6 is an amino acid sequence of 3 to 5 amino acid residues,and A10 is an amino acid sequence of 5 to 25 amino acid residues.

Thus, according to one preferred aspect, provided are isolated proteinshaving anticoagulant activity, including isolated proteins havingactivity as Factor Xa inhibitors, having at least one NAP domain offormula II which includes the following sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ. ID. NOS. 67 and 156; (b)Cys-A2-Cys is selected from one of SEQ. ID. NOS. 157 to 159; (c)A3-Cys-A4 is selected from one of SEQ. ID. NOS. 160 to 173; (d) Cys-A5is selected from SEQ. ID. NOS. 174 and 175; (e) Cys-A6 is selected fromone of SEQ. ID. NOS. 176 to 178; (f) Cys-A7-Cys-A8 is selected from SEQ.ID. NOS. 179 and 180; (g) Cys-A9 is selected from one of SEQ. ID. NOS.181 to 183; and (h) Cys-A10 is selected from one of SEQ. ID. NOS. 184 to204.

In another preferred embodiment of this aspect of the invention, A3 hasthe sequence Glu-A3_(a) -A3_(b), wherein A3_(a) and A3_(b) areindependently selected amino acid residues. More preferably, A³ _(a) isselected from the group consisting of Ala, Arg, Pro, Lys, Ile, His, Leu,and Thr, and A3_(b) is selected from the group consisting of Lys, Thr,and Arg. Especially preferred A3 sequences are selected from the groupconsisting of Glu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys,Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys, and Glu-Thr-Lys.

In an additional preferred embodiment of this aspect of the invention,A4 is an amino acid sequence having a net anionic charge.

According to this aspect of the invention, a preferred A7 amino acidresidue is Val or Ile.

Another preferred embodiment of this aspect of the invention is one inwhich A8 includes the amino acid sequence A8_(a) -A8_(b) -A8_(c) -A8_(d)-A8_(e) -A8_(f) -A8_(g) [SEQ. ID. NO. 68], wherein

(a) A8_(a) is the first amino acid residue in A8,

(b) at least one of A8_(a) and A8_(b) is selected from the groupconsisting of Glu or Asp, and

(c) A8_(c) through A8_(g) are independently selected amino acidresidues.

Preferably, A8_(c) is Gly, A8_(d) is selected from the group consistingof Phe, Tyr, and Leu, A8_(e) is Tyr, A8_(f) is Arg, and A8_(g) isselected from Asp and Asn. An especially preferred A8_(c) -A8_(d)-A8_(e) -A8_(f) -A8_(g) sequence is selected from the group consistingof Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 69], Gly-Phe-Tyr-Arg-Asn [SEQ. ID.NO. 70], Gly-Tyr-Tyr-Arg-Asp [SEQ, ID. NO. 71], Gly-Tyr-Tyr-Arg-Asn[SEQ. ID. NO. 72], and Gly-Leu-Tyr-Arg-Asp [SEQ. ID. NO. 73].

An additional preferred embodiment is one in which A10 includes an aminosequence selected from the group consisting of Glu-Ile-Ile-His-Val [SEQ.ID. NO. 74], Asp-Ile-Ile-Met-Val [SEQ. ID. NO. 75],Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], and Met-Glu-Ile-Ile-Thr [SEQ.ID. NO. 77].

NAP proteins AcaNAP5 and AcaNAP6 include the amino acid sequenceGlu-Ile-Ile-His-Val [SEQ. ID. NO. 74] in A10, and are preferred NAPsaccording to this embodiment of the invention.

In one embodiment of this aspect of the invention, a preferred NAPmolecule is one wherein

(a) A3 has the sequence Glu-A3_(a) -A3_(b), wherein A3_(a) and A3_(b)are independently selected amino acid residues;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A7 is selected from the group consisting of Val and Ile;

(d) A8 includes an amino acid sequence selected from the groupconsisting of Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 69], Gly-Phe-Tyr-Arg-Asn[SEQ. ID. NO. 70], Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 71],Gly-Tyr-Tyr-Arg-Asn [SEQ. ID. NO. 72], and Gly-Leu-Tyr-Arg-Asp [SEQ. ID.NO. 73]; and

(e) A10 includes an amino sequence selected from the group consisting ofGlu-Ile-Ile-His-Val [SEQ. ID. NO. 74], Asp-Ile-Ile-Met-Val [SEQ. ID. NO.75], Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], and Met-Glu-Ile-Ile-Thr[SEQ. ID. NO. 77].

Pharmaceutical compositions comprising NAP proteins according to thisembodiment, and methods of inhibiting blood coagulation comprisingadministering NAP proteins according to this embodiment also arecontemplated by this invention. NAP proteins within this embodiment ofthe invention have at least one NAP domain. Preferred are NAPs havingone or two NAP domains. NAP proteins AcaNAP5 and AcaNAP6 have one NAPdomain and are preferred NADs according to this embodiment of theinvention.

In another preferred embodiment, a NAP molecule is one wherein

(a) A3 is selected from the group consisting of Glu-Ala-Lys,Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg,Glu-Leu-Lys, and Glu-Thr-Lys;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A7 is Val or Ile;

(d) A8 includes an amino acid sequence selected from the groupconsisting of A[a-A8_(b) -Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 78], A8_(a)-A8_(b) -Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO. 79], A8_(a) -A8_(b)-Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 80], A8_(a) -A8_(b)-Gly-Tyr-Tyr-Arg-Asn [SEQ. ID. NO. 81], and A8_(a) -A8_(b)-Gly-Leu-Tyr-Arg-Asp [SEQ. ID. NO. 82], wherein at least one of A8_(a)and A8_(b) is Glu or Asp;

(e) A9 is an amino acid sequence of five amino acid residues; and

(f) A10 includes an amino acid sequence selected from the groupconsisting of Glu-Ile-Ile-His-Val [SEQ. ID. NO. 74], Asp-Ile-Ile-Met-Val[SEQ. ID. NO. 75], Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], andMet-Glu-Ile-Ile-Thr [SEQ. ID. NO. 77]. Pharmaceutical compositionscomprising NAP proteins according to this embodiment, and methods ofinhibiting blood coagulation comprising administering NAP proteinsaccording to this embodiment also are contemplated by this invention.NAP proteins within this embodiment of the invention have at least oneNAP domain. Preferred are NAPs having one or two NAP domains. Preferredare proteins having at least one NAP domain that is substantially thesame as that of either AcaNAP5 [SEQ. ID. NO. 40] or AcaNAP6 [SEQ. ID.NO. 41]. NAP proteins AcaNAP5 [SEQ. ID. NOS. 4 and 40] and AcaNAP6 [SEQ.ID. NOS. 6 and 41] have one NAP domain and are especially preferred NAPsaccording to this embodiment of the invention.

Preferred NAP proteins having anticoagulant activity, including thosehaving Factor Xa inhibitory activity, according to all the embodimentsrecited above for this aspect of the invention, can be derived from anematode species. A preferred nematode species is selected from thegroup consisting of Ancylostoma caninum, Ancylostoma ceylanicum,Ancylostoma duodenale, Necator americanus, and Heligomosomoidespolygyrus. Particularly preferred are NAP proteins AcaNAP5 and AcaNAP6derived from Ancyclostoma caninum.

This aspect of the invention also contemplates isolated recombinant cDNAmolecules encoding a protein having anticoagulant and/or Factor Xainhibitory activity, wherein the protein is defined according to each ofthe embodiments recited above for isolated NAP protein havinganticoagulant and/or Factor Xa inhibitory activity. Preferred cDNAsaccording to this aspect of the invention code for AcaNAP5 and AcaNAP6.

The Factor Xa inhibitory activity of NAPs within this aspect of theinvention can be determined using protocols described herein. Example Adescribes one such method. In brief, a NAP is incubated with factor Xafor a period of time, after which a factor Xa substrate is added. Therate of substrate hydrolysis is measured, with a slower rate compared tothe rate in the absence of NAP indicative of NAP inhibition of factorXa. Example C provides another method of detecting a NAP's inhibitoryactivity toward factor Xa when it is assembled into the prothrombinasecomplex, which more accurately reflects the normal physiologicalfunction of fXa in vivo. As described therein, factor Xa assembled inthe prothrombinase complex is incubated with NAP, followed by additionof substrate. Factor Xa-mediated thrombin generation by theprothrombinase complex is measured by the rate of thrombin generationfrom this mixture.

NAPs Having Anticoagulant Activity, Including NAPs Having Factor VIIa/TFInhibitory Activity (FORMULA III)

In another aspect, NAPs of the present invention also include anisolated protein having anticoagulant activity, including and isolatedprotein having Factor VIIa/TF inhibitory activity and having one or moreNAP domains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10("FORMULA III"),

wherein

(a) A1 is an amino acid sequence of 7 to 8 amino acid residues;

(b) A2 is an amino acid sequence;

(c) A3 is an amino acid sequence of 3 amino acid residues;

(d) A4 is an amino acid sequence;

(e) A5 is an amino acid sequence of 3 to 4 amino acid residues;

(f) A6 is an amino acid sequence;

(g) A7 is an amino acid;

(h) A8 is an amino acid sequence of 11 to 12 amino acid residues;

(i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and

(j) A10 is an amino acid sequence;

wherein each of A2, A4, A6 and A10 has an independently selected numberof independently selected amino acid residues and each sequence isselected such that each NAP domain has in total less than about 120amino acid residues.

Pharmaceutical compositions comprising NAP proteins according to thisaspeact, and methods of inhibiting blood coagulation comprisingadministering NAP proteins according to this aspect also arecontemplated by this invention. NAP proteins within this aspect of theinvention have at least one NAP domain. Preferred are NAPs having one ortwo NAP domains. Preferred are proteins having at least one NAP domainsubstantially the same as that of AcaNAPc2 [SEQ. ID. NO. 59]. NAPprotein AcaNAPc2 [SEQ. ID. NO. 59] has one NAP domain and is anespecially preferred NAP according to this aspect of the invention.

Preferred NAP proteins according to this aspect of the invention arethose in which A2 is an amino acid sequence of 3 to 5 amino acidresidues, A4 is an amino acid sequence of 6 to 19 amino acid residues,A6 is an amino acid sequence of 3 to 5 amino acid residues, and A10 isan amino acid sequence of 5 to 25 amino acid residues.

Accordingly, in one preferred aspect, provided are NAPs havinganticoagulant activity, including factor VIIa/TF inhibitory activity,and having at least one NAP domain of formula III wherein the NAP domainincludes the amino acid sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ. ID. NOS. 83 and 205; (b)Cys-A2-Cys is selected from one of SEQ. ID. NOS. 206 to 208; (c)A3-Cys-A4 is selected from one of SEQ. ID. NOS. 209 to 222; (d) Cys-A5is selected from SEQ. ID. NOS. 223 and 224; (e) Cys-A6 is selected fromone of SEQ. ID. NOS. 225 to 227; (f) Cys-A7-Cys-A8 is selected from SEQ.ID. NOS. 228 and 229; (g) Cys-A9 is selected from SEQ. ID. NOS. 230 to232; and (h) Cys-A10 is selected from one of SEQ. ID. NOS. 233 to 253.

In another preferred embodiment according to this aspect of theinvention, A3 has the sequence Asp-A3_(a) -A3_(b), wherein A3_(a) andA3_(b) are independently selected amino acid residues. More preferably,A3 is Asp-Lys-Lys.

In an additional preferred embodiment, A4 is an amino acid sequencehaving a net anionic charge.

In another preferred embodiment of this aspect of the invention, A5 hasthe sequence A5_(a) -A5_(b) -A5_(c) -A5_(d) [SEQ. ID. NO. 84], whereinA5_(a) through A5_(d) are independently selected amino acid residues.Preferably, A5_(a) is Leu and A5_(c) is Arg.

According to this aspect of the invention, a preferred A7 amino acidresidue is Val or Ile, more preferably Val.

An additional preferred embodiment of this aspect of the invention isone in which A8 includes the amino acid sequence A8_(a) -A8_(b) -A8_(c)-A8_(d) -A8_(e) -A8_(f) -A8_(g) [SEQ. ID. NO. 68], wherein

(a) A8_(a) is the first amino acid residue in A8,

(b) at least one of A8_(a) and A8_(b) is selected from the groupconsisting of Glu or Asp, and

(c) A8_(c) through A8_(g) are independently selected amino acidresidues.

Preferably, A8_(c) is Gly, A8_(d) is selected from the group consistingof Phe, Tyr, and Leu, A8_(e) is Tyr, A8_(f) is Arg, and A8_(g) isselected from Asp and Asn. A preferred A8_(c) -A8_(d) -A8_(e) -A8_(f)-A8_(g) sequence is Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO. 70].

In one embodiment, a preferred NAP molecule is one wherein:

(a) A3 has the sequence Asp-A3_(a) -A3_(b), wherein A3_(a) and A3_(b)are independently selected amino acid residues;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A5 has the sequence A5_(a) -A5_(b) -A5_(c) -A5_(d), wherein A5_(a)through A5_(d) are independently selected amino acid residues; and

(d) A7 is selected from the group consisting of Val and Ile.Pharmaceutical compositions comprising NAP proteins according to thisembodiment, and methods of inhibiting blood coagulation comprisingadministering NAP proteins according to this embodiment also arecontemplated by this invention. NAP proteins within this embodiment ofthe invention have at least one NAP domain. Preferred are NAPs havingone or two NAP domains. NAP protein AcaNAPc2 has one NAP domain and is apreferred NAP according to this embodiment of the invention.

In another preferred embodiment, a NAP molecule is one wherein

(a) A3 is Asp-Lys-Lys;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A5 has the sequence A5_(a) -A5_(b) -A5_(c) -A5_(d) [SEQ. ID. NO.85], wherein A5_(a) through A5_(d) are independently selected amino acidresidues;

(d) A7 is Val; and

(e) A8 includes an amino acid sequence A8_(a) -A8_(b)-Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO. 79], wherein at least one of A8_(a)and A8_(b) is Glu or Asp. Pharmaceutical compositions comprising NAPproteins according to this embodiment, and methods of inhibiting bloodcoagulation comprising administering NAP proteins according to thisembodiment also are contemplated by this invention. NAP proteins withinthis embodiment of the invention have at least one NAP domain. Preferredare NAPs having one or two NAP domains. NAP protein AcaNAPc2 [SEQ. ID.NO. 59] has one NAP domain and is a preferred NAP according to thisembodiment of the invention.

Preferred NAP proteins having anticoagulant activity, including thosehaving Factor VIIa/TF inhibitory activity, according to all theembodiments recited above for this aspect of the invention, can bederived from a nematode species. A preferred nematode species isselected from the group consisting of Ancylostoma caninum, Ancylostomaceylanicum, Ancylostoma duodenale, Necator americanus, andHeligomosomoides polygyrus. Particularly preferred is NAP proteinAcaNAPc2 derived from Ancylostoma caninum.

This aspect of the invention also contemplates isolated recombinant cDNAmolecules encoding a protein having anticoagulant and/or Factor VIIa/TFinhibitory activity, wherein the protein is defined according to each ofthe embodiments recited above for isolated NAP protein havinganticoagulant and/or Factor VIIa/TF inhibitory activity. A preferredcDNA according to this aspect has a nucleotide sequence [SEQ. ID. NO.19] and codes for AcaNAPc2 [SEQ. ID. NO. 59].

The fVIIa/TF inhibitory activity of NAPs within this aspect of theinvention can be determined using protocols described herein. Example Edescribes fVIIa/TF assays. There, the fVIIa/TF-mediated cleavage andliberation of the tritiated activation peptide from radiolabeled humanfactor IX (³ H-FIX) or the amidolytic hydrolysis of a chromogenicpeptidyl substrate are measured. Interestingly, NAP fVIIa/TF inhibitorsof the present invention require the presence of fXa in order to beactive fVIIa/TF inhibitors. However, NAP fVIIa/TF inhibitors wereequally effective in the presence of fXa in which the active site hadbeen irreversibly occupied with the peptidyl chloromethyl ketoneH-Glu-Gly-Arg-CMK (EGR), and thereby rendered catalytically inactive(EGR-fXa). While not wishing to be bound by any one explanation, itappears that a NAP having fVIIa/TF inhibition activity forms a binarycomplex with fXa by binding to a specific recognition site on the enzymethat is distinct from the primary recognition sites P4-P₁, within thecatalytic center of the enzyme. This is followed by the formation of aquaternary inhibitory complex with the fVIIa/TF complex. Consistent withthis hypothesis is that EGR-fXa can fully support the inhibition offVIIa/TF by NAPs inhibitory for fVIIa/TF despite covalent occupancy ofthe primary recognition sites (P4-P₁) within the catalytic site of fXaby the tripeptidyl-chloromethyl ketone (EGR-CMK).

The fVIIa/TF inhibitory activity of NAPs also can be determined usingthe protocols in Example D, as well as the fXa assays described inExamples A and C. There, the ability of a NAP to inhibit the catalyticactivity of a variety of enzymes is measured and compared to itsinhibitory activity toward the fVIIa/TF complex. Specific inhibition offVIIa/TF by a NAP is a desired characteristic for certain applications.

A further aspect of the invention includes an isolated protein havinganticoagulant activity, and cDNAs coding for the protein, wherein saidprotein specifically inhibits the catalytic activity of the fVIIa/TFcomplex in the presence of fXa or catalytically inactive fXa derivative,but does not specifically inhibit the activity of FVIIa in the absenceof TF and does not specifically inhibit prothrombinase. Preferredproteins according to this aspect of the invention have thecharacteristics described above for an isolated protein having FactorVIIa/TF inhibitory activity and having one or more NAP domains. Apreferred protein according to this aspect of the invention is AcaNAPc2.

NAPs within this aspect of the invention are identified by theirfVIIa/TF inhibitory activity in the presence of fXa or a fXa derivative,whether the derivative is catalytically active or not. The protocolsdescribed in Examples B, C, and F are useful in determining theanticoagulant activity of such NAPs. The protocol in Example A candetect a NAP's inactivity toward free fXa or prothrombinase. Datagenerated using the protcols in Example E will identify NAPs thatrequire either catalytically active or inactive fXa to inhibit fVIIa/TFcomplex.

NAPs Having Serine Protease Inhibitory Activity (FORMULA IV)

In an additional aspect, NAPs of the present invention also include anisolated protein having serine protease inhibitory activity and havingone or more NAP domains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10,("FORMULA IV") wherein

(a) A1 is an amino acid sequence of 7 to 8 amino acid residues;

(b) A2 is an amino acid sequence;

(c) A3 is an amino acid sequence of 3 amino acid residues;

(d) A4 is an amino acid sequence;

(e) A5 is an amino acid sequence of 3 to 4 amino acid residues;

(f) A6 is an amino acid sequence;

(g) A7 is an amino acid;

(h) A8 is an amino acid sequence of 10 to 12 amino acid residues;

(i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and

(j) A10 is an amino acid sequence;

wherein each of A2, A4, A6 and A10 has an independently selected numberof independently selected amino acid residues and each sequence isselected such that each NAP domain has in total less than about 120amino acid residues. Pharmaceutical compositions comprising NAP proteinsaccording to this aspect, and methods of inhibiting blood coagulationcomprising administering NAP proteins according to this aspect also arecontemplated by this invention. NAP proteins within this aspect of theinvention have at least one NAP domain. Preferred are NAPs having one ortwo NAP domains. Preferred are NAP domains that have amino acidsequences that are substantially the same as the NAP domains of HpoNAP5[SEQ. ID. NO. 60] or NanNAP [SEQ. ID. NO. 61]. NAP proteins HpoNAP5[SEQ. ID. NO. 60] and NamNAP [SEQ. ID. NO. 61] have one NAP domain andare preferred NAPs according to this aspect of the invention.

Preferred NAP proteins according to this aspect of the invention arethose in which A2 is an amino acid sequence of 3 to 5 amino acidresidues, A4 is an amino acid sequence of 6 to 19 amino acid residues,A6 is an amino acid sequence of 3 to 5 amino acid residues, and A10 isan amino acid sequence of 1 to 25 amino acid residues.

Thus, in one preferred aspect, NAPs exhibiting serine protease activityhave at least one NAP domain of Formula IV which includes the amino acidsequence:

Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ. ID. NOS. 86 and 254; (b)Cys-A2-Cys is selected from one of SEQ. ID. NOS. 255 to 257; (c)A3-Cys-A4 is selected from one of SEQ. ID. NOS. 258 to 271; (d) Cys-A5is selected from SEQ. ID. NOS. 272 and 273; (e) Cys-A6 is selected fromone of SEQ. ID. NOS. 274 to 276; (f) Cys-A7-Cys-A8 is selected from oneof SEQ. ID. NOS. 277 to 279; (g) Cys-A9 is selected from one of SEQ. ID.NOS. 280 to 282; and (h) Cys-A10 is selected from one of SEQ. ID. NOS.283 to 307.

In another preferred embodiment, A3 has the sequence Glu-A3_(a) -A3_(b),wherein A3_(a) and A3_(b) are independently selected amino acidresidues. More preferably, A3 is Glu-Pro-Lys.

In an additional preferred embodiment, A4 is an amino acid sequencehaving a net anionic charge.

In another preferred embodiment, A5 has the sequence A5_(a) -A5_(b)-A5_(c), wherein A5_(a) through A5_(c) are independently selected aminoacid residues. Preferably, A5_(a) is Thr and A5_(c) is Asn. Anespecially preferred A5 sequence includes Thr-Leu-Asn or Thr-Met-Asn.

According to this aspect of the invention, a preferred A7 amino acidresidue is Gln.

In one embodiment of this aspect of the invention, a preferred NAPmolecule is one wherein

(a) A3 has the sequence Glu-A3_(a) -A3_(b), wherein A3_(a) and A3_(b)are independently selected amino acid residues;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A5 has the sequence A5_(a) -A5_(b) -A5_(c), wherein A5_(a) throughA5_(c) are independently selected amino acid residues, and

(d) A7 is Gln. Pharmaceutical compositions comprising NAP proteinsaccording to this embodiment, and methods of inhibiting bloodcoagulation comprising administering NAP proteins according to thisembodiment also are contemplated by this invention. NAP proteins withinthis embodiment of the invention have at least one NAP domain. Preferredare NAPs having one or two NAP domains. NAP proteins HpoNAP5 [SEQ. ID.NO. 60] and NamNAP [SEQ. ID. NO. 61] have one NAP domain and arepreferred NAPs according to this embodiment of the invention.

In another preferred embodiment, a NAP molecule is one wherein

(a) A3 is Glu-Pro-Lys;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A5 is selected from Thr-Leu-Asn and Thr-Met-Asn; and

(d) A7 is Gln. Pharmaceutical compositions comprising NAP proteinsaccording to this embodiment, and methods of inhibiting bloodcoagulation comprising administering NAP proteins according to thisembodiment also are contemplated by this invention. NAP proteins withinthis embodiment of the invention have at least one NAP domain. Preferredare NAPs having one or two NAP domains. NAP proteins HpoNAP5 [SEQ. ID.NO. 60] and N mNAP [SEQ. ID. NO. 61] have one NAP domain and arepreferred NAPs according to this embodiment of the invention.

Preferred NAP proteins having serine protease inhibitory activity,according to all the embodiments recited above for this aspect of theinvention, can be derived from a nematode species. A preferred nematodespecies is selected from the group consisting of Ancylostoma caninum,Ancylostoma ceylanicum, Ancylostoma duodenale, Necator americanus, andHeligomosomoides polygyrus. Particularly preferred are NAP proteinsHpoNAP5 and NamNAP derived from Heligomosomoides polygyrus and Necatoramericanus, respectively.

This aspect of the invention also contemplates isolated recombinant cDNAmolecules encoding a protein having serine protease inhibitory activity,wherein the protein is defined according to each of the embodimentsrecited above for isolated NAP protein having serine protease inhibitoryactivity. Preferred cDNAs according to this aspect have nucleotidesequences [SEQ. ID. NO. 14] (HpoNAP5) and [SEQ. ID. NO. 39] (NamNAP) andcode for HpoNAP5 [SEQ. ID. NO. 60) and NamNAP [SEQ. ID. NO. 61].

The serine protease inhibitory activity can be determined using any ofthe assays disclosed in Examples A through F, or any commonly usedenzymatic assay for measuring inhibition of serine protease activity.Procedures for a multitude of enzymatic assays can be found in thevolumes of Methods of Enzymology or similar reference materials.Preferred NAPs have serine protease inhibitory activity directed towardenzymes in the blood coagulation cascade or toward trypsin/elastase.

NAPs Having Anticoagulant Activity (FORMULA V)

In another aspect of the invention, NAPs of the present invention alsoinclude an isolated protein having anticoagulant activity and having oneor more NAP domains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10("FORMULA V"), wherein

(a) A1 is an amino acid sequence of 7 to 8 amino acid residues;

(b) A2 is an amino acid sequence;

(c) A3 is an amino acid sequence of 3 amino acid residues;

(d) A4 is an amino acid sequence;

(e) A5 is an amino acid sequence of 3 to 4 amino acid residues;

(f) A6 is an amino acid sequence;

(g) A7 is an amino acid;

(h) A8 is an amino acid sequence of 11 to 12 amino acid residues;

(i) A9 is an amino acid sequence of 5 to 7 amino acid residues; AND

(j) A10 is an amino acid sequence;

wherein each of A2, A4, A6 and A10 has an independently selected numberof independently selected amino acid residues and each sequence isselected such that each NAP domain has in total less than about 120amino acid residues. Pharmaceutical compositions comprising NAP proteinsaccording to this aspeact, and methods of inhibiting blood coagulationcomprising administering NAP proteins according to this aspect also arecontemplated by this invention. NAP proteins within this aspect of theinvention have at least one NAP domain. Preferred are NAPs having one ortwo NAP domains. Preferred NAPs include those having at least one NAPdomain having an amino acid sequence substantially the same as any of[SEQ. ID. NOS. 40 to 58]. NAP proteins AcaNAP5 [SEQ. ID. NO. 40],AcaNAP6 [SEQ. ID. NO. 41], AcaNAP48 [SEQ. ID. NO. 42], AcaNAP23 [SEQ.ID. NO. 43], AcaNAP24 [SEQ. ID. NO. 44], AcaNAP25 [SEQ. ID. NO. 45],AcaNAP44 [SEQ. ID. NO. 46], AcaNAP31 [SEQ. ID. NO. 47], AduNAP4 [SEQ.ID. NO. 55], AceNAP5 [SEQ. ID. NO. 57], and AceNAP7 [SEQ. ID. NO. 58]have one NAP domain and are preferred NAPs according to this aspect ofthe invention. NAP proteins AceNAP4 [SEQ. ID. NO. 62], AcaNAP45 [SEQ.ID. NO. 63], AcaNAP47 [SEQ. ID. NO. 64], and AduNAP7 [SEQ. ID. NO. 65]have two NAP domains and are preferred NAPs according to this aspect ofthe invention.

Preferred NAP proteins according to this aspect of the invention arethose in which A2 is an amino acid sequence of 3 to 5 amino acidresidues, A4 is an amino acid sequence of 6 to 19 amino acid residues,A6 is an amino acid sequence of 3 to 5 amino acid residues, and A10 isan amino acid sequence of 5 to 25 amino acid residues.

Preferred NAPs of the present invention according to this aspect includeisolated proteins having anticoagulant activity and having at least oneNAP domain of formula V which includes the following sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ. ID. NOS. 87 and 308; (b)Cys-A2-Cys is selected from one of SEQ. ID. NOS. 309 to 311; (c)A3-Cys-A4 is selected from one of SEQ. ID. NOS. 312 to 325; (d) Cys-A5is selected from SEQ. ID. NOS. 326 and 327; (e) Cys-A6 is selected fromone of SEQ. ID. NOS. 328 to 330; (f) Cys-A7-Cys-A8 is selected from SEQ.ID. NOS. 331 to 332; (g) Cys-A9 is selected from one of SEQ. ID. NOS.333 to 335; and (h) Cys-A10 is selected from one of SEQ. ID. NOS. 336 to356.

In another preferred embodiment, A3 has the sequence Glu-A3_(a) -A3_(b),wherein A3_(a) and A3_(b) are independently selected amino acidresidues. More preferably, A3_(a) is selected from the group consistingof Ala, Arg, Pro, Lys, Ile, His, Leu, and Thr, and A3_(b) is selectedfrom the group consisting of Lys, Thr, and Arg. Especially preferred A3sequences are selected from the group consisting of Glu-Ala-Lys,Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg,Glu-Leu-Lys, and Glu-Thr-Lys.

In an additional preferred embodiment, A4 is an amino acid sequencehaving a net anionic charge.

According to this aspect of the invention, a preferred A7 amino acidresidue is Val or Ile.

Another preferred embodiment of the invention is one in which A8includes the amino acid sequence A8_(a) -A8_(b) -A8_(c) -A8_(d) -A8_(e)-A8_(f) -A8_(g) [SEQ. ID. NO. 68], wherein

(a) A8_(a) is the first amino acid residue in A8,

(b) at least one of A8_(a) and A8_(b) is selected from the groupconsisting of Glu or Asp, and

(c) A8_(c) through A8_(g) are independently selected amino acidresidues.

Preferably, A8_(c) is Gly, A8_(d) is selected from the group consistingof Phe, Tyr, and Leu, A8_(e) is Tyr, A8_(f) is Arg, and A8_(g) isselected from Asp and Asn. A preferred A8_(c) -A8_(d) -A8_(e) -A8_(f)-A8_(g) sequence is selected from the group consisting ofGly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 69], Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO.70], Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 71], Gly-Tyr-Tyr-Arg-Asn [SEQ.ID. NO. 72], and Gly-Leu-Tyr-Arg-Asp [SEQ. ID. NO. 73].

Another preferred embodiment is one in which A10 includes an aminosequence selected from the group consisting of Glu-Ile-Ile-His-Val [SEQ.ID. NO. 74], Asp-Ile-Ile-Met-Val [SEQ. ID. NO. 75],Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], and Met-Glu-Ile-Ile-Thr [SEQ.ID. NO. 77]. NAP proteins AcaNAP5 [SEQ. ID. NOS. 4 and 40] and AcaNAP6[SEQ. ID. NOS. 6 and 41] include the amino acid sequenceGlu-Ile-Ile-His-Val [SEQ. ID. NO. 74] in A10, and are preferred NAPsaccording to this embodiment of the invention. NAP protein AcaNAP48[SEQ. ID. NO. 42] includes the amino acid sequence Asp-Ile-Ile-Met-Val[SEQ. ID. NO. 75] in A10 and is a preferred NAP according to thisembodiment of the invention. NAP proteins AcaNAp23 [SEQ. ID. NO. 43],AcaNAP24 [SEQ. ID. NO. 44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ.ID. NO. 46], AcaNAP31 [SEQ. ID. NO. 47], and AceNAP4 [SEQ. ID. NO. 48,49 AND 62] include the amino acid sequence Phe-Ile-Thr-Phe-Ala-Pro [SEQ.ID. NO. 76] and are preferred NAPs according to this embodiment of theinvention. NAP proteins AcaNAP45 [SEQ. ID. NOS. 50, 53 AND 63], AcaNAP47[SEQ. ID. NO. 51, 54 AND 64], AduNAP7 [SEQ. ID. NO. 52, 56 AND 65],AduNAP4 [SEQ. ID. NO. 55], AceNAP5 [SEQ. ID. NO. 57], and AceNAP7 [SEQ.ID. NO. 58] include the amino acid sequence Met-Glu-Ile-Ile-Thr [SEQ.ID. NO. 77] and are preferred NAPs according to this embodiment of theinvention.

In one embodiment, a preferred NAP molecule is one wherein

(a) A3 has the sequence Glu-A3_(a) -A3_(b), wherein A3_(a) and A3_(b)are independently selected amino acid residues;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A7 is selected from the group consisting of Val and Ile;

(d) A8 includes an amino acid sequence selected from the groupconsisting of Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 69], Gly-Phe-Tyr-Arg-Asn[SEQ. ID. NO. 70], Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 71],Gly-Tyr-Tyr-Arg-Asn [SEQ. ID. NO. 72], and Gly-Leu-Tyr-Arg-Asp [SEQ. ID.NO. 73]; and

(e) A10 includes an amino sequence selected from the group consisting ofGlu-Ile-Ile-His-Val [SEQ. ID. NO. 74], Asp-Ile-Ile-Met-Val [SEQ. ID. NO.75], Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], and Met-Glu-Ile-Ile-Thr[SEQ. ID. NO. 77]. Pharmaceutical compositions comprising NAP proteinsaccording to this embodiment, and methods of inhibiting bloodcoagulation comprising administering NAP proteins according to thisembodiment also are contemplated by this invention. NAP proteins withinthis aspect of the invention have at least one NAP domain. Preferred areNAPs having one or two NAP domains. NAP proteins AcaNAP5 [SEQ. ID. NOS.4 and 40], AcaNAP6 [SEQ. ID. NOS. 6 and 41], AcaNAP48 [SEQ. ID. NO. 42],AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24 [SEQ. ID. NO. 44], Ac AP25 [SEQ.ID. NO. 45], AcaNAP44 [SEQ. ID. NO. 46], AcaNAP31 [SEQ. ID. NO. 47],AduNAP4 [SEQ. ID. NO. 55], AceNAP5 [SEQ. ID. NO. 57], and AceNAP7 [SEQ.ID. NO. 58] have one NAP domain and are preferred NAPs according to thisembodiment. NAP proteins AceNAP4 [SEQ. ID. NO. 62], AcaNAP45 [SEQ. ID.NO. 63], AcaNAP47 [SEQ. ID. NO. 64], and AduNAP7 [SEQ. ID. NO. 65] havetwo NAP domains and are preferred NAPs according to this embodiment.

In another preferred embodiment, a NAP molecule is one wherein

(a) A3 is selected from the group consisting of Glu-Ala-Lys,Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg,Glu-Leu-Lys, and Glu-Thr-Lys;

(b) A4 is an amino acid sequence having a net anionic charge;

(c) A7 is Val or Ile;

(d) A8 includes an amino acid sequence selected from the groupconsisting of A8_(a) -A8_(b) -Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 78],A8_(a) -A8_(b) -Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO. 79], A8_(a) -A8_(b)-Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 80], A8_(a) -A8_(b)-Gly-Tyr-Tyr-Arg-Asn [SEQ. ID. NO. 81], and A8_(a) -A8_(b)-Gly-Leu-Tyr-Arg-Asp [SEQ. ID. NO. 82], wherein at least one of A8_(a)and A8_(b) is Glu or Asp;

(e) A9 is an amino acid sequence of five amino acid residues; and

(f) A10 includes an amino acid sequence selected from the groupconsisting of Glu-Ile-Ile-His-Val [SEQ. ID. NO. 74], Asp-Ile-Ile-Met-Val[SEQ. ID. NO. 75], Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], andMet-Glu-Ile-Ile-Thr [SEQ. ID. NO. 77]. Pharmaceutical compositionscomprising NAP proteins according to this embodiment, and methods ofinhibiting blood coagulation comprising administering NAP proteinsaccording to this embodiment also are contemplated by this invention.NAP proteins within this embodiment of the invention have at least oneNAP domain. Preferred are NAPs having one or two NAP domains. NAPproteins AcaNAP5 [SEQ. ID. NOS. 4 and 40], AcaNAP6 [SEQ. ID. NOS. 6 and41], AcaNAP48 [SEQ. ID. NO. 42], AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24[SEQ. ID. NO. 44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ. ID. NO.46], AcaNAP31 [SEQ. ID. NO. 47], AduNAP4 [SEQ. ID. NO. 55], AceNAP5[SEQ. ID. NO. 57], and AceNAP7 [SEQ. ID. NO. 58] have one NAP domain andare preferred NAPs according to this embodiment. NAP proteins AceNAP4[SEQ. ID. NO. 62], AcaNAP45 [SEQ. ID. NO. 63], AcaNAP47 [SEQ. ID. NO.64], and AduNAP7 [SEQ. ID. NO. 65] have two NAP domains and arepreferred NAPs according to this embodiment.

Preferred NAP proteins having anticoagulant activity, according to allthe embodiments recited above for this aspect of the invention, can bederived from a nematode species. A preferred nematode species isselected from the group consisting of Ancylostoma caninum, Ancylostomaceylanicum, Ancylostoma duodenale, Necator americanus, andHeligomosomoides polygyrus. Particularly preferred are NAP proteinsAcaNAP5 [SEQ. ID. NO. 4 and 40], AcaNAP6 [SEQ. ID. NO. 6 and 41],AcaNAP48 [SEQ. ID. NO. 42], AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24 [SEQ.ID. NO. 44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ. ID. NO. 46],AcaNAP45 [SEQ. ID. NO. 63], AcaNAP47 [SEQ. ID. NO. 64], and AcaNAP31[SEQ. ID. NO. 47] derived from Ancylostoma caninum; AceNAP4 [SEQ. ID.NO. 62], AceNAP5 [SEQ. ID. NO. 57], and AceNAP7 [SEQ. ID. NO. 58]derived from Ancylostoma ceylanicum; and AduNAP7 [SEQ. ID. NO. 65] andAduNAP4 [SEQ. ID. NO. 55] derived from Ancylostoma duodenale.

This aspect of the invention also contemplates isolated recombinant cDNAmolecules encoding a protein having anticoagulant activity, wherein theprotein is defined according to each of the embodiments recited abovefor isolated NAP protein having anticoagulant activity. Preferred cDNAsaccording to this aspect include AcaNAP5 [SEQ. ID. NO. 3], AcaNAP6 [SEQ.ID. NO. 5], AcaNAP48 [SEQ. ID. NO. 38], AcaNAP23 [SEQ. ID. NO. 31],AcaNAP24 [SEQ. ID. NO. 32], AcaNAP25 [SEQ. ID. NO. 33], AcaNAP44 [SEQ.ID. NO. 35], AcaNAP31 [SEQ. ID. NO. 34], AduNAP4 [SEQ. ID. NO. 12],AceNAP5 [SEQ. ID. NO. 10], AceNAP7 [SEQ. ID. NO. 11], AceNAP4 [SEQ. ID.NO. 9], AcaNAP45 [SEQ. ID. NO. 36], AcaNAP47 [SEQ. ID. NO. 37], andAduNAP7 (SEQ. ID. NO. 13].

The anticoagulation activity of NAPs within this aspect of the inventioncan be determined using protocols described herein. Examples B and Fpresent particulary useful methods for assessing a NAP's anticoagulationactivity. The procedures described for detecting NAPs having fXainhibitory activity (Examples A,C) and fVIIa/TF inhibitory activity(Example E) also are useful in evaluating a NAP's anticoagulationactivity.

Oligonucleotides

Another aspect of this invention is an oligonucleotide comprising asequence selected from

YG109: TCAGACATGT-ATAATCTCAT-GTTGG [SEQ. ID. NO. 88],

YG103: AAGGCATACC-CGGAGTGTGG-TG [SEQ. ID. NO. 89],

NAP-1: AAR-CCN-TGY-GAR-MGG-AAR-TGY [SEQ. ID. NO. 90], and

NAP-4.RC: TW-RWA-NCC-NTC-YTT-RCA-NAC-RCA [SEQ. ID. NO. 91].

These oligonucleotide sequences hybridize to nucleic acid sequencescoding for NAP protein.

The isolated NAPs of the present invention include those havingvariations in the disclosed amino acid sequence or sequences, includingfragments, naturally occurring mutations, allelic variants, randomlygenerated artificial mutants and intentional sequence variations, all ofwhich conserve anticoagulant activity. The term "fragments" refers toany part of the sequence which contains fewer amino acids than thecomplete protein, as for example, partial sequences excluding portionsat the amino-terminus, carboxy-terminus or between the amino-terminusand carboxy-terminus of the complete protein.

The isolated NAPs of the present invention also include proteins havinga recombinant amino acid sequence or sequences which conserve theanticoagulant activity of the NAP domain amino acid sequence orsequences. Thus, as used herein, the phrase "NAP protein" or the term"protein" when referring to a protein comprising a NAP domain, means,without discrimination, native NAP protein and NAP protein made byrecombinant means. These recombinant proteins include hybrid proteins,such as fusion proteins, proteins resulting from the expression ofmultiple genes within the expression vector, proteins resulting fromexpression of multiple genes within the chromosome of the host cell, andmay include a polypeptide having anticoagulant activity of a disclosedprotein linked by peptide bonds to a second polypeptide. The recombinantproteins also include variants of the NAP domain amino acid sequence orsequences of the present invention that differ only by conservativeamino acid substitution. Conservative amino acid substitutions aredefined as "sets" in Table 1 of Taylor, W. R., J. Mol. Biol., 188:233(1986). The recombinant proteins also include variants of the disclosedisolated NAP domain amino acid sequence or sequences of the presentinvention in which amino acid substitutions or deletions are made whichconserve the anticoagulant activity of the isolated NAP domain sequenceor sequences.

One preferred embodiment of the present invention is a protein isolatedby biochemical methods from the nematode, Ancylostoma caninum, asdescribed in Example 1. This protein increases the clotting time ofhuman plasma in the PT and aPTT assays, contains one NAP domain, and ischaracterized by an N-terminus having the amino acid sequence,Lys-Ala-Tyr-Pro-Glu-Cys-Gly-Glu-Asn-Glu-Trp-Leu-Asp [SEQ. ID. NO. 92],and a molecular weight of about 8.7 kilodaltons to about 8.8 kilodaltonsas determined by mass spectrometry.

Further preferred embodiments of the present invention include theproteins having anticoagulant activity made by recombinant methods fromthe cDNA library isolated from the nematode, Ancylostoma caninum, forexample, AcaNAP5 [SEQ. ID. NO. 4 or 40], AcaNAP6 [SEQ. ID. NO. 6 or 41],Pro-AcaNAP5 [SEQ. ID. NO. 7], Pro-AcaNAP6 [SEQ. ID. NO. 8], AcaNAP48[SEQ. ID. NO. 42], AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24 [SEQ. ID. NO.44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ. ID. NO. 46], AcaNAP31[SEQ. ID. NO. 47], AcaNAP45 [SEQ. ID. NO. 63], AcaNAP47 [SEQ. ID. NO.64], and AcaNAPc2 [SEQ. ID. NO. 59]; isolated from the nematode,Ancyclostoma ceylanium, for example, AceNAP4 [SEQ. ID. NO. 62], AceNAP5[SEQ. ID. NO. 57], and AceNAP7 [SEQ. ID. NO. 58]; isolated from thenematode, Ancyclostoma duodenale, for example, AduNAP4 [SEQ. ID. NO. 55]and AduNAP7 [SEQ. ID. NO. 65]; isolated from the nematode Heligmosmoidespolygyrus, for example, HpoNAP5 [SEQ. ID. NO. 60]; and the nematodeNecator americanus, for example, NamNAP [SEQ. ID. NO. 61]. The aminoacid sequences of these proteins are shown in FIGS. 11 and 16 andelsewhere. Each such preferred embodiment increases the clotting time ofhuman plasma in the PT and aPTT assays and contains at least one NAPdomain.

With respect to "isolated proteins", the proteins of the presentinvention are isolated by methods of protein purification well known inthe art, or as disclosed below. They may be isolated from a naturalsource, from a chemical mixture after chemical synthesis on a solidphase or in solution such as solid-phase automated peptide synthesis, orfrom a cell culture after production by recombinant methods.

As described further hereinbelow, the present invention alsocontemplates pharmaceutical compositions comprising NAP and methods ofusing NAP to inhibit the process of blood coagulation and associatedthrombosis. Oligonucleotide probes useful for identifying NAP nucleicacid in a sample also are within the purview of the present invention,as described more fully hereinbelow.

1. NAP Isolated From Natural Sources

The preferred isolated proteins (NAPs) of the present invention may beisolated and purified from natural sources. Preferred as natural sourcesare nematodes; suitable nematodes include intestinal nematodes such asAncylostoma caninum, Ancylostoma ceylanicum, Ancylostoma duodenale,Necator americanus and Heligmosomoides polygyrus. Especially preferredas a natural source is the hematophagous nematode, the hookworm,Ancylostoma caninum.

The preferred proteins of the present invention are isolated andpurified from their natural sources by methods known in the biochemicalarts. These methods include preparing a soluble extract and enrichingthe extract using chromatographic methods on different solid supportmatrices. Preferred methods of purification would include preparation ofa soluble extract of a nematode in 0.02 M Tris-HCl, pH 7.4 buffercontaining various protease inhibitors, followed by sequentialchromatography of the extract through columns containing Concanavalin-ASepharose matrix, Poros20 HQ cation-ion exchange matrix, Superdex30 gelfiltration matrix and a C18 reverse-phase matrix. The fractionscollected from such chromatography columns may be selected by theirability to increase the clotting time of human plasma, as measured bythe PT and aPTT assays, or their ability to inhibit factor Xa amidolyticactivity as measured in a calorimetric amidolytic assay using purifiedenzyme, or by other methods disclosed in Examples A to F herein. Anexample of a preferred method of purification of an isolated protein ofthe present invention would include that as disclosed in Example 1.

The preferred proteins of the present invention, when purified from anatural source, such as Ancylostoma caninum, as described, include thosewhich contain the amino acid sequence:Lys-Ala-Tyr-Pro-Glu-Cys-Gly-Glu-Asn-Glu-Trp-Leu-Asp (SEQ. ID. NO. 92].Especially preferred are the purified proteins having this amino acidsequence at its amino terminus, such as shown in FIG. 2 (AcaNAP5 [SEQ.ID. NO. 4]) or FIG. 4 (AcaNAP6 [SEQ. ID. NO. 6]). One preferred proteinof the present invention was demonstrated to have the amino acidsequence, Lys-Ala-Tyr-Pro-Glu-Cys-Gly-Glu-Asn-Glu-Trp-Leu-Asp [SEQ. ID.NO. 92] at its amino-terminus and a molecular weight of 8.7 to 8.8kilodaltons, as determined by mass spectrometry.

2. NAP Made by Chemical Synthesis

The preferred isolated NAPs of the present invention may be synthesizedby standard methods known in the chemical arts.

The isolated proteins of the present invention may be prepared usingsolid-phase synthesis, such as that described by Merrifield, J. Amer.Chem. Soc., 85:2149 (1964) or other equivalent methods known in thechemical arts, such as the method described by Houghten in Proc. Natl.Acad. Sci., 82:5132 (1985).

Solid-phase synthesis is commenced from the C-terminus of the peptide bycoupling a protected amino acid or peptide to a suitable insolubleresin. Suitable resins include those containing chloromethyl,bromomethyl, hydroxylmethyl, aminomethyl, benzhydryl, andt-alkyloxycarbonylhydrazide groups to which the amino acid can bedirectly coupled.

In this solid phase synthesis, the carboxy terminal amino acid, havingits alpha amino group and, if necessary, its reactive side chain groupsuitably protected, is first coupled to the insoluble resin. Afterremoval of the alpha amino protecting group, such as by treatment withtrifluoroacetic acid in a suitable solvent, the next amino acid orpeptide, also having its alpha amino group and, if necessary, anyreactive side chain group or groups suitably protected, is coupled tothe free alpha amino group of the amino acid coupled to the resin.Additional suitably protected amino acids or peptides are coupled in thesame manner to the growing peptide chain until the desired amino acidsequence is achieved. The synthesis may be done manually, by usingautomated peptide synthesizers, or by a combination of these.

The coupling of the suitably protected amino acid or peptide to the freealpha amino group of the resin-bound amino acid can be carried outaccording to conventional coupling methods, such as the azide method,mixed anhydride method, DCC (dicyclohexylcarbodiimide) method, activatedester method (p-nitrophenyl ester or N-hydroxysuccinimide ester), BOP(benzotriazole-1-yl-oxy-tris (diamino) phosphonium hexafluorophosphate)method or Woodward reagent K method.

It is common in peptide synthesis that the protecting groups for thealpha amino group of the amino acids or peptides coupled to the growingpeptide chain attached to the insoluble resin will be removed underconditions which do not remove the side chain protecting groups. Uponcompletion of the synthesis, it is also common that the peptide isremoved from the insoluble resin, and during or after such removal, theside chain protecting groups are removed.

Suitable protecting groups for the alpha amino group of all amino acidsand the omega amino group of lysine include benzyloxycarbonyl,isonicotinyloxycarbonyl, o-chlorobenzyloxycarbonyl,p-nitrophenyloxycarbonyl, p-methoxyphenyloxycarbonyl, t-butoxycarbonyl,t-amyloxycarbonyl, adamantyloxycarbonyl,2-(4-biphenyl)-2-propyloxycarbonyl, 9-fluorenylmethoxycarbonyl,methylsulfonylethoxylcarbonyl, trifluroacetyl, phthalyl, formyl,2-nitrophenylsulfphenyl, diphenylphosphinothioyl,dimethylphosphinothioyl, and the like.

Suitable protecting groups for the carboxy group of aspartic acid andglutamic acid include benzyl ester, cyclohexyl ester, 4-nitrobenzylester, t-butyl ester, 4-pyridylmethyl ester, and the like.

Suitable protecting groups for the guanidino group of arginine includenitro, p-toluenesulfonyl, benzyloxycarbonyl, adamantyloxycarbonyl,p-methoxybenzenesulfonyl, 4-methoxy-2,6-dimethylbenzenesulfonyl,1,3,5-trimethylphenylsulfonyl, and the like.

Suitable protecting groups for the thiol group of cysteine includep-methoxybenzyl, triphenylmethyl, acetylaminomethyl, ethylcarbamoyl,4-methylbenzyl, 2,4,6-trimethylbenzyl, and the like.

Suitable protecting groups for the hydroxy group of serine includebenzyl, t-butyl, acetyl, tetrahydropyranyl, and the like.

The completed peptide may be cleaved from the resin by treatment withliquid hydrofluoric acid containing one or more thio-containingscavengers at reduced temperatures. The cleavage of the peptide from theresin by such treatment will also remove all side chain protectinggroups from the peptide.

The cleaved peptide is dissolved in dilute acetic acid followed byfiltration, then is allowed to refold and establish proper disulfidebond formation by dilution to a peptide concentration of about 0.5 mM toabout 2 mM in a 0.1 M acetic acid solution. The pH of this solution isadjusted to about 8.0 using ammonium hydroxide and the solution isstirred open to air for about 24 to about 72 hours.

The refolded peptide is purified by chromatography, preferably by highpressure liquid chromatography on a reverse phase column, eluting with agradient of acetonitrile in water (also containing 0.1% trifluoroaceticacid), with the preferred gradient running from 0 to about 80%acetonitrile in water. Upon collection of fractions containing the purepeptide, the fractions are pooled and lyophilized to the solid peptide.

3. NAP Made By Recombinant Methods

Alternatively, the preferred isolated NAPs of the present invention maybe made by recombinant DNA methods taught herein and well known in thebiological arts. Sambrook, J., Fritsch, E. F. and Maniatis, T.,Molecular Cloning, A Laboratory Manual, Second Edition, volumes 1 to 3,Cold Spring Harbor Laboratory Press (1989).

Recombinant DNA methods allow segments of genetic information, DNA, fromdifferent organisms, to be joined together outside of the organisms fromwhich the DNA was obtained and allow this hybrid DNA to be incorporatedinto a cell that will allow the production of the protein for which theoriginal DNA encodes.

Genetic information encoding a protein of the present invention may beobtained from the genomic DNA or mRNA of an organism by methods wellknown in the art. Preferred methods of obtaining this geneticinformation include isolating mRNA from an organism, converting it toits complementary DNA (cDNA), incorporating the cDNA into an appropriatecloning vector, and identifying the clone which contains the recombinantcDNA encoding the desired protein by means of hybridization withappropriate oligonucleotide probes constructed from known sequences ofthe protein.

The genetic information in the recombinant cDNA encoding a protein ofthe present invention may be ligated into an expression vector, thevector introduced into host cells, and the genetic information expressedas the protein for which it encodes.

(A) Preparation of cDNA Library

Preferred natural sources of mRNA from which to construct a cDNA libraryare nematodes which include intestinal nematodes such as Ancylostomacaninum, Ancylostoma ceylanicum, Ancylostoma duodenale, Necatoramericanus and Heligmosomoides polygyrus. Especially preferred as anatural source of mRNA is the hookworm nematode, Ancylostoma caninum.

Preferred methods of isolating mRNA encoding a protein of the presentinvention, along with other mRNA, from an organism includechromatography on poly U or poly T affinity gels. Especially preferredmethods of isolating the mRNA from nematodes include the procedure andmaterials provided in the QuickPrep mRNA Purification kit (Pharmacia).

Preferred methods of obtaining double-stranded cDNA from isolated mRNAinclude synthesizing a single-stranded cDNA on the mRNA template using areverse transcriptase, degrading the RNA hybridized to the cDNA strandusing a ribonuclease (RNase), and synthesizing a complementary DNAstrand by using a DNA polymerase to give a double-stranded cDNA.Especially preferred methods include those wherein about 3 micrograms ofmRNA isolated from a nematode is converted into double-stranded cDNAmaking use of Avian Myeloblastosis Virus reverse transcriptase, RNase H.and E. coli DNA polymerase I and T4 DNA polymerase.

cDNA encoding a protein of the present invention, along with the othercDNA in the library constructed as above, are then ligated into cloningvectors. Cloning vectors include a DNA sequence which accommodates thecDNA from the cDNA library. The vectors containing the cDNA library areintroduced into host cells that can exist in a stable manner and providea environment in which the cloning vector is replicated. Suitablecloning vectors include plasmids, bacteriophages, viruses and cosmids.Preferred cloning vectors include the bacteriophages. Cloning vectorswhich are especially preferred include the bacteriophage, lambda gt11Sfi-Not vector.

The construction of suitable cloning vectors containing the cDNA libraryand control sequences employs standard ligation and restrictiontechniques which are well known in the art. Isolated plasmids, DNAsequences or synthesized oligonucleotides are cleaved, tailored andreligated in the form desired.

With respect to restriction techniques, site-specific cleavage of cDNAis performed by treating with suitable restriction enzyme underconditions which are generally understood in the art, and theparticulars of which are specified by the manufacturer of thesecommercially available restriction enzymes. For example, see the productcatalogs of New England Biolabs, Promega and Stratagene Cloning Systems.

Generally, about 1 microgram of the cDNA is cleaved by treatment inabout one unit of a restriction enzyme in about 20 microliters of buffersolution. Typically, an excess of restriction enzyme is used to ensurecomplete cleavage of the cDNA. Incubation times of about 1 to 2 hours atabout 37° C. are usually used, though exceptions are known. After eachcleavage reaction, the protein may be removed by extraction withphenol/chloroform, optionally followed by chromatography over a gelfiltration column, such as Sephadex® G50. Alternatively, cleaved cDNAfragments may be separated by their sizes by electrophoresis inpolyacrylamide or agarose gels and isolated using standard techniques. Ageneral description of size separations is found in Methods ofEnzymology, 65:499-560 (1980).

The restriction enzyme-cleaved cDNA fragments are then ligated into acloning vector.

With respect to ligation techniques, blunt-end ligations are usuallyperformed in about 15 to about 30 microliters of a pH 7.5 buffercomprising about 1 mM ATP and about 0.3 to 0.6 (Weiss) units of T4 DNAligase at about 14° C. Intermolecular "sticky end" ligations are usuallyperformed at about 5 to 100 nanomolar total-end DNA concentrations.Intermolecular blunt-end ligations (usually employing about 10 to30-fold molar excess of linkers) are performed at about 1 micromolartotal-end DNA concentrations.

(B) Preparation of cDNA Encoding NAP

Cloning vectors containing the cDNA library prepared as disclosed areintroduced into host cells, the host cells are cultured, plated, andthen probed with a hybridization probe to identify clones which containthe recombinant cDNA encoding a protein of the present invention.Preferred host cells include bacteria when phage cloning vectors areused. Especially preferred host cells include E. coli strains such asstrain Y1090.

Alternatively, the recombinant cDNA encoding a protein of the presentinvention may be obtained by expression of such protein on the outersurface of a filamentous phage and then isolating such phage by bindingthem to a target protein involved in blood coagulation.

An important and well known feature of the genetic code is itsredundancy--more than one triplet nucleotide sequence codes for oneamino acid. Thus, a number of different nucleotide sequences arepossible for recombinant cDNA molecules which encode a particular aminoacid sequence for a NAP of the present invention. Such nucleotidesequences are considered functionally equivalent since they can resultin the production of the same amino acid sequence in all organisms.Occasionally, a methylated variant of a purine or pyrimidine may beincorporated into a given nucleotide sequence. However, suchmethylations do not affect the coding relationship in any way.

(1) Using Oligonucleotide Probes

Hybridization probes and primers are oligonucleotide sequences which arecomplementary to all or part of the recombinant cDNA molecule that isdesired. They may be prepared using any suitable method, for example,the phosphotriester and phosphodiester methods, described respectivelyin Narang, S. A. et al., Methods in Enzymology, 68:90 (1979) and Brown,E. L. et al., Methods in Enzymology, 68:109 (1979), or automatedembodiments thereof. In one such embodiment, diethylphosphoramidites areused as starting materials and may be synthesized as described byBeaucage et al., Tetrahedron Letters, 22:1859-1862 (1981). One methodfor synthesizing oligonucleotides on a modified solid support isdescribed in U.S. Pat. No. 4,458,066. Probes differ from primers in thatthey are labelled with an enzyme, such as horseradish peroxidase, orradioactive atom, such as ³² P, to facilitate their detection. Asynthesized probe is radiolabeled by nick translation using E. coli DNApolymerase I or by end labeling using alkaline phosphatase and T4bacteriophage polynucleotide kinase.

Preferred hybridization probes include oligonucleotide sequences whichare complementary to a stretch of the single-stranded cDNA encoding aportion of the amino acid sequence of a NAP purified from a nematode,such as the hookworm, Ancylostoma caninum. For example, a portion of theamino acid sequence shown in FIG. 2 (AcaNAP5) [SEQ. ID. NO. 4] or FIG. 4(AcaNAP6 [SEQ. ID. NO. 6]) can be used. Especially preferredhybridization probes include those wherein their oligonucleotidesequence is complementary to the stretch of the single-stranded cDNAencoding the amino acid sequence:Lys-Ala-Tyr-Pro-Glu-Cys-Gly-Glu-Asn-Glu-Trp [SEQ. ID. NO. 93]. Suchhybridization probes include the degenerate probe having theoligonucleotide sequence: AAR GCi TAY CCi GAR TGY GGi GAR AAY GAR TGG[SEQ. ID. NO. 94], wherein R is A or G, Y is T or C, and i is inosine. Apreferred recombinant cDNA molecule encoding a protein of the presentinvention is identified by its ability to hybridize to this probe.

Preferred hybridization probes also include the pair NAP-1 [SEQ. ID. NO.90] and NAP-4.RC [SEQ. ID. NO. 91], and the pair YG109 [SEQ. ID. NO. 88]and YG103 [SEQ. ID. NO. 89], both of which are described in Examples 13and 12, respectively.

Upon identification of the clone containing the desired cDNA,amplification is used to produce large quantities of a gene encoding aprotein of the present invention in the form of a recombinant cDNAmolecule.

Preferred methods of amplification include the use of the polymerasechain reaction (PCR). See, e.g., PCR Technology, W. H. Freeman andCompany, New York (Edit. Erlich, H. A. 1992). PCR is an in vitroamplification method for the synthesis of specific DNA sequences. InPCR, two oligonucleotide primers that hybridize to opposite strands andflank the region of interest in the cDNA of the clone are used. Arepetitive series of cycles involving cDNA denaturation into singlestrands, primer annealing to the single-stranded cDNA, and the extensionof the annealed primers by DNA polymerase results in number of copies ofcDNA, whose termini are defined by the 5-ends of the primers,approximately doubling at every cycle. Ibid., p.1. Through PCRamplification, the coding domain and any additional primer encodedinformation such as restriction sites or translational signals (signalsequences, start codons and/or stop codons) of the recombinant cDNAmolecule to be isolated is obtained.

Preferred conditions for amplification of cDNA include those using Taqpolymerase and involving 30 temperature cycles of: 1 minute at 95° C.; 1minute at 50° C.; 1.5 minutes at 72° C. Preferred primers include theoligo(dT)-NotI primer, AATTCGCGGC CGC(T)₁₅ [SEQ. ID. NO. 95], obtainedfrom Promega Corp. in combination with either (i) the degenerate primerhaving the oligonucleotide sequence: AAR GCi TAY CCi GAR TGY GGi GAR AAYGAR TGG [SEQ. ID. NO. 94], wherein R is A or G, Y is T or C, and i isinosine, or (ii) the lambda gt11 primer #1218, GGTGGCGACG ACTCCTGGAGCCCG [SEQ. ID. NO. 96], obtained from New England Biolabs.

The nucleic acid sequence of a recombinant cDNA molecule made asdisclosed is determined by methods based on the dideoxy method ofSanger, F. et al, Proc. Natl. Acad. Sci. USA, 74:5463 (1977) as furtherdescribed by Messing, et al., Nucleic Acids Res., 9:309 (1981).

Preferred recombinant cDNA molecules made as disclosed include thosehaving the nucleic acid sequences of FIGS. 1, 3, 7, 9, 13, and 14.

(2) Using NAP cDNAs As Probes

Also especially preferred as hybridization probes are oligonucleotidesequences encoding substantially all of the amino acid sequence of a NAPpurified from the nematode, the hookworm, Ancylostoma caninum.Especially preferred probes include those derived from the AcaNAP5 andAcaNAP6 genes and having the following nucleic acid sequences (AcaNAP5gene): AAG GCA TAC CCG GAG TGT GGT GAG AAT GAA TGG CTC GAC GAC TGT GGAACT CAG AAG CCA TGC GAG GCC AAG TGC AAT GAG GAA CCC CCT GAG GAG GAA GATCCG ATA TGC CGC TCA CGT GGT TGT TTA TTA CCT CCT GCT TGC GTA TGC AAA GACGGA TTC TAC AGA GAC ACG GTG ATC GGC GAC TGT GTT AGG GAA GAA GAA TGC GACCAA CAT GAG ATT ATA CAT GTC TGA [SEQ. ID. NO. 1], or FIG. 3 (AcaNAP6gene): AAG GCA TAC CCG GAG TGT GGT GAG AAT GAA TGG CTC GAC GTC TGT GGAACT AAG AAG CCA TGC GAG GCC AAG TGC AGT GAG GAA GAG GAG GAA GAT CCG ATATGC CGA TCA TTT TCT TGT CCG GGT CCC GCT GCT TGC GTA TGC GAA GAC GGA TTCTAC AGA GAC ACG GTG ATC GGC GAC TGT GTT AAG GAA GAA GAA TGC GAC CAA CATGAG ATT ATA CAT GTC TGA [SEQ. ID. NO. 2].

Preferred hybridization probes also include sequences encoding asubstantial part of the amino acid sequence of a NAP, such as the PCRfragment generated with the primer couple NAP-1 [SEQ. ID. NO. 90] andNAP-4.RC [SEQ. ID. NO. 91] as described in Example 13.

(3) Using Phage Display

Disclosed herein is a method to select cDNAs encoding the proteins ofthe present invention from whole cDNA libraries making use offilamentous phage display technology. Current display technology withfilamentous phage relies on the in-frame insertion of coding regions ofinterest into gene 3 or gene 8 which code for the attachment protein andmajor coat protein of the phage, respectively. Those skilled in the artwill recognize that various difficulties are inherent in performing thiswith a vast mixture of cDNAs of unknown sequence and that the mostpractical way to obtain functional display of cDNA products wouldconsist of fusing the cDNAs through their 5'-end. Indeed, cDNA librariesof sufficient size may contain several cDNAs which derive from the samemRNA but which are 5'-terminally truncated at various positions suchthat some of them may be expressed as fusion products. A strategy alongthis line, which relies on the ability of the leucine zippers Jun andFos to form heterodimers was recently described. See, Crameri, R. andSuter, M., Gene, 137:69-75 (1993).

We have found a novel alternative and direct way to convalently linkcDNA gene products to the phage surface; the finding is based on theobservation that proteins fused to the C-terminus of phage coat protein6 can be functionally displayed. This observation has led to thedevelopment of a phagemid system as described herein which allows theexpression of functionally displayed cDNA products, which in turnpermits the affinity-selection of phage particles which contain the cDNArequired for the production of the displayed cDNA product. This systemprovides the basis for the isolation of cDNAs which encode a protein ofthe present invention. Once isolated, recombinant cDNA moleculescontaining such cDNA can be used for expression of the proteins of thepresent invention in other expression systems. The recombinant cDNAmolecules made in this way are considered to be within the scope of thepresent invention.

Recombinant cDNA molecules of the present invention are isolated bypreparing a cDNA library from a natural source (as for example, anematode such as a hookworm), ligating this cDNA library intoappropriate phagemid vectors, transforming host cells with these vectorscontaining the cDNAs, culturing the host cells, infecting thetransformed cells with an appropriate helper phage, separating phagefrom the host cell culture, separating phage expressing a protein of thepresent invention on its surface, isolating these phage, and isolating arecombinant cDNA molecule from such phage.

The phagemid vectors are constructed using the pUC119 expression vectordescribed by Vieira, J. and Messing, J., Methods in Enzymology, 153:3-11(1987). The filamentous phage gene 6 encoding a surface protein of thephage is modified on its 5'and 3'ends by the addition of HindIII andSfiI restriction sites, respectively, by use of three forward primersand one backward primer using PCR. This results in three DNA fragmentswhich are further modified by addition to their 3'ends of NotI and BamHIrestriction sites by PCR. After separate digestion of the three DNAfragments with HindIII and BamHI, the three DNA fragments are ligatedinto the pUC119 to give pDONG61, pDONG62 and pDONG63 expression vectors.These vectors permit the insertion of cDNA as SfiI-NotI fragments intothem.

cDNA libraries are prepared from natural sources, such as nematodes, asdescribed in Examples 2, 9, and 13. Preferred nematodes from which tomake such libraries include the intestinal nematodes such as Ancylostomacaninum, Ancylostoma ceylanicum, Ancylostoma duodenale, Necatoramericanus and Heligmosomoides polygyrus.

A cDNA library as SfiI-NotI fragments may be directly directionallyligated into the phagemid vectors pDONG61, pDONG62 and pDONG63.Alternatively, a cDNA library which has been ligated into the lambdagt11 phage vector as described in Example 2 can be recovered by PCR,followed by isolation with electrophoresis and then directional ligationinto these vectors. In the latter approach, preferred conditions for PCRuse Taq polymerase; the primers, lambda gt11 primer #1218 having thesequence GGTGGCGACG ACTCCTGGAG CCCG (New England Biolabs, Beverly,Mass., USA) [SEQ. ID. NO. 96] and the oligo(dT)-NotI primer having thesequence, AATTCGCGGC CGC(T)₁₅, (Promega Corp.) [SEQ. ID. NO. 95]; and 20temperature cycles of 1 minute at 95° C., 1 minute at 50° C., and 3minutes at 72° C., followed by 10 minutes at 65° C.

Host cells are transformed with the pDONG expression vectors containinga cDNA library. Preferred host cells include E. coli strains, withstrain TG1 being especially preferred. Preferred methods for thetransformation of E. coli host cells include electroporation.

The transformed cells are cultured at 37° C. in LB medium supplementedwith 1% glucose and 100 micrograms/ml carbenicillin until the opticalabsorbance at 600 nm reaches the value of 0.5 and then are infected withVCSM13 helper phage (Stratagene) at a multiplicity of infection (moi) of20.

The phage are separated from the culture by centrifugation, then arepurified by precipitations with polyethylene glycol/sodium chloride.

The phage which express a NAP of the present invention on their surfaceare isolated by taking advantage of the ability of the NAP to bind to atarget protein involved in blood coagulation, for example, Factor Xa.

Preferred methods of isolating such phage include a method comprisingthe steps of:

(1) combining a solution of factor Xa labelled to biotin with a solutionof such phage;

(2) incubating this mixture;

(3) contacting a solid phase labelled with streptavidin with thismixture;

(4) incubating the solid phase with the mixture;

(5) removing the solid phase from the mixture and contacting the solidphase with buffer to remove unbound phage;

(6) contacting the solid phase with a second buffer to remove the boundphage from the solid phase;

(7) isolating such phage;

(8) transforming host cells with such phage;

(9) culturing the transformed host cells;

(10) infecting transformed host cells with VCSM13 helper phage;

(11) isolating the phage from the host cell culture; and

(12) repeating steps (1) to (11) four more times.

An especially preferred method of isolating such phage include themethod as detailed in Example 10.

Single-stranded DNA was prepared from the isolated phages and theirinserts 3' to the filamentous phage gene 6 sequenced.

FIG. 9 depicts the recombinant cDNA molecule, AcaNAPc2, isolated by thephage display method. The deduced amino acid sequence of the protein ofthe present invention encoded by AcaNAPc2 is also shown in this figure.

(C) Preparation of Recombinant NAP

The recombinant cDNA molecules of the present invention when isolated asdisclosed are used to obtain expression of the NAPs of the presentinvention. Generally, a recombinant cDNA molecule of the presentinvention is incorporated into an expression vector, this expressionvector is introduced into an appropriate host cell, the host cell iscultured, and the expressed protein is isolated.

Expression vectors are DNA sequences that are required for thetranscription of cloned copies of genes and translation of their mRNAsin an appropriate host. These vectors can express either procaryotic oreucaryotic genes in a variety of cells such as bacteria, yeast,mammalian, plant and insect cells. Proteins may also be expressed in anumber of virus systems.

Suitably constructed expression vectors contain an origin of replicationfor autonomous replication in host cells, or are capable of integratinginto the host cell chromosomes. Such vectors will also contain selectivemarkers, a limited number of useful restriction enzyme sites, a highcopy number, and strong promoters. Promoters are DNA sequences thatdirect RNA polymerase to bind to DNA and initiate RNA synthesis; strongpromoters cause such initiation at high frequency. The preferredexpression vectors of the present invention are operatively linked to arecombinant cDNA molecule of the present invention, i.e., the vectorsare capable directing both replication of the attached recombinant cDNAmolecule and expression of the protein encoded by the recombinant cDNAmolecule. Expression vectors may include, but are not limited to cloningvectors, modified cloning vectors and specifically designed plasmids orviruses.

Suitable host cells for expression of the proteins of the presentinvention include bacteria, yeast, mammalian, plant and insect cells.With each type of cell and species therein certain expression vectorsare appropriate as will be disclosed below.

Procaryotes may be used for expression of the proteins of the presentinvention. Suitable bacteria host cells include the various strains ofE. coli, Bacillus subtilis, and various species of Pseudomonas. In thesesystems, plasmid vectors which contain replication sites and controlsequences derived from species compatible with the host are used.Suitable vectors for E. coli are derivatives of pBR322, a plasmidderived from an E. coli species by Bolivar et al., Gene, 2:95 (1977).Common procaryotic control sequences, which are defined herein toinclude promoters for transcription, initiation, optionally with anoperator, along with ribosome binding site sequences, include thebeta-lactamase and lactose promoter systems (Chang et al., Nature,198:1056 (1977)), the tryptophan promoter system (Goeddel et al.,Nucleic Acids Res., 8:4057 (1980)) and the lambda-derived-P_(L) promoterand N-gene ribosome binding site (Shimatake et al., Nature, 292:128(1981)). However, any available promoter system compatible withprocaryotes can be used. Preferred procaryote expression systems includeE. coli and their expression vectors.

Eucaryotes may be used for expression of the proteins of the presentinvention. Eucaryotes are usually represented by the yeast and mammaliancells. Suitable yeast host cells include Saccharomyces cerevisiae andPichia pastoris. Suitable mammalian host cells include COS and CHO(chinese hamster ovary) cells.

Expression vectors for the eucaryotes are comprised of promoters derivedfrom appropriate eucaryotic genes. Suitable promoters for yeast cellexpression vectors include promoters for synthesis of glycolyticenzymes, including those for 3-phosphoglycerate kinase gene inSaccharomyces cerevisiae (Hitzman et al., J. Biol. Chem., 255:2073(1980)) and those for the metabolism of methanol as the alcohol oxidasegene in Pichia pastoris (Stroman et al., U.S. Pat. Nos. 4,808,537 and4,855,231). Other suitable promoters include those from the enolase gene(Holland, M. J. et al., J. Biol. Chem., 256:1385 (1981)) or the Leu2gene obtained from YEp13 (Broach, J. et al., Gene, 8:121 (1978)).

Preferred yeast expression systems include Pichia pastoris and theirexpression vectors. NAP-encoding cDNAs expressed in Pichia pastorisoptionally may be mutated to encode a NAP protein that incorporates aproline residue at the C-terminus. In some instances the NAP protein isexpressed at a higher level and can be more resistant to unwantedproteolysis. One such cDNA, and its expression in Pichia pastoris, isdescribed in Example 17.

Suitable promoters for mammalian cell expression vectors include theearly and late promoters from SV40 (Fiers, et al., Nature, 273:113(1978)) or other viral promoters such as those derived from polyoma,adenovirus II, bovine papilloma virus or avian sarcoma viruses. Suitableviral and mammalian enhancers may also be incorporated into theseexpression vectors.

Suitable promoters for plant cell expression vectors include thenopaline synthesis promoter described by Depicker, A. et al., Mol. Appl.Gen., 1:561 (1978).

Suitable promoters for insect cell expression vectors include modifiedversions of the system described by Smith et al., U.S. Pat. No.4,745,051. The expression vector comprises a baculovirus polyhedrinpromoter under whose control a cDNA molecule encoding a protein can beplaced.

Host cells are transformed by introduction of expression vectors of thepresent invention into them. Transformation is done using standardtechniques appropriate for each type of cell. The calcium treatmentemploying calcium chloride described in Cohen, S. N., Proc. Natl. Acad.Sci. USA, 69:2110 (1972), or the RbCl method described in Maniatis etal., Molecular Cloning: A Laboratory Manual, p. 254, Cold Spring HarborPress (1982) is used for procaryotes or other cells which containsubstantial cell wall barriers. The transformation of yeast is carriedout as described in Van Solingen, P. et al., J. Bacter., 130:946 (1977)and Hsiao, C. L. et al., Proc. Natl. Acad. Sci. USA, 76:3829 (1979).Mammalian cells without much cell wall are transformed using the calciumphosphate procedure of Graham and van der Eb, Virology, 52:546 (1978).Plant cells are transformed by infection with Agrobacterium tumefaciensas described in Shaw, C. et al, Gene, 23:315 (1983). Preferred methodsof transforming E. coli and Pichia pastoris with expression vectorsinclude electroporation.

Transformed host cells are cultured under conditions, such as type ofmedia, temperature, oxygen content, fluid motion, etc., well known inthe biological arts.

The recombinant proteins of the present invention are isolated from thehost cell or media by standard methods well known in the biochemicalarts, which include the use of chromatography methods. Preferred methodsof purification would include sequential chromatography of an extractthrough columns containing Poros20 HQ anion-ion exchange matrix orPoros20 HS cation exchange matrix, Superdex30 gel filtration matrix anda C18 reverse-phase matrix. The fractions collected after one suchchromatography column may be selected by their ability to increase theclotting time of human plasma, as measured by the PT and aPTT assays, ortheir ability to inhibit factor Xa amidolytic activity as measured in acalorimetric assay, or demonstration of activity in any of the otherassays disclosed herein. Examples of preferred methods of purificationof a recombinant protein of the present invention are disclosed inExamples 3, 4, 6, 8, 14 and 15.

4. Methods of Using NAP

In one aspect, the present invention includes methods of collectingmammalian plasma such that clotting of said plasma is inhibited,comprising adding to a blood collection tube an amount of a protein ofthe present invention sufficient to inhibit the formation of a clot whenmammalian blood is drawn into the tube, adding mammalian blood to saidtube, separating the red blood cells from the mammalian plasma, andcollecting the mammalian plasma.

Blood collection tubes include stoppered test tubes having a vacuumtherein as a means to draw blood obtained by venipuncture into thetubes. Preferred test tubes include those which are made of borosilicateglass, and have the dimensions of, for example, 10.25×47 mm, 10.25×50mm, 10.25×64 mm, 10.25×82 mm, 13×75 mm, 13×100 mm, 16×75 mm, 16×100 mmor 16×125 mm. Preferred stoppers include those which can be easilypunctured by a blood collection needle and which when placed onto thetest tube provide a seal sufficient to prevent leaking of air into thetube.

The proteins of the present invention are added to the blood collectiontubes in a variety of forms well known in the art, such as a liquidcomposition thereof, a solid composition thereof, or a liquidcomposition which is lyophilized to a solid in the tube. The amountadded to such tubes is that amount sufficient to inhibit the formationof a clot when mammalian blood is drawn into the tube. The proteins ofthe present invention are added to blood collection tubes in suchamounts that, when combined with 2 to 10 ml of mammalian blood, theconcentration of such proteins will be sufficient to inhibit clotformation. Typically, this effective concentration will be about 1 to10,000 nM, with 10 to 1000 nM being preferred. Alternatively, theproteins of the present invention may be added to such tubes incombination with other clot-inhibiting additives, such as heparin salts,EDTA salts, citrate salts or oxalate salts.

After mammalian blood is drawn into a blood collection tube containingeither a protein of the present invention or the same in combinationwith other clot-inhibiting additives, the red blood cells are separatedfrom the mammalian plasma by centrifugation. The centrifugation isperformed at g-forces, temperatures and times well known in the medicalarts. Typical conditions for separating plasma from red blood cellsinclude centrifugation at a centrifugal force of about 100×g to about1500×g, at a temperatures of about 5 to about 25° C., and for a time ofabout 10 to about 60 minutes.

The mammalian plasma may be collected by pouring it off into a separatecontainer, by withdrawing it into a pipette or by other means well knownto those skilled in the medical arts.

In another aspect, the present invention includes methods for preventingor inhibiting thrombosis (clot formation) or blood coagulation in amammal, comprising administering to said mammal a therapeuticallyeffective amount of a protein or a pharmaceutical composition of thepresent invention.

The proteins or pharmaceutical compositions of the present invention areadministered in vivo, ordinarily in a mammal, preferably in a human. Inemploying them in vivo, the proteins or pharmaceutical compositions canbe administered to a mammal in a variety of ways, including orally,parenterally, intravenously, subcutaneously, intramuscularly,colonically, rectally, nasally or intraperitoneally, employing a varietyof dosage forms. Administration is preferably parenteral, such asintravenous on a daily basis. Alternatively, administration ispreferably oral, such as by tablets, capsules or elixers taken on adaily basis.

In practicing the methods of the present invention, the proteins orpharmaceutical compositions of the present invention are administeredalone or in combination with one another, or in combination with othertherapeutic or in vivo diagnostic agents.

As is apparent to one skilled in the medical art, a therapeuticallyeffective amount of the proteins or pharmaceutical compositions of thepresent invention will vary depending upon the age, weight and mammalianspecies treated, the particular proteins employed, the particular modeof administration and the desired affects and the therapeuticindication. Because these factors and their relationship to determiningthis amount are well known in the medical arts, the determination oftherapeutically effective dosage levels, the amount necessary to achievethe desired result of preventing thrombosis, will be within the ambit ofone skilled in these arts.

Typically, administration of the proteins or pharmaceutical compositionof the present invention is commenced at lower dosage levels, withdosage levels being increased until the desired effect of preventing invivo thrombosis is achieved which would define a therapeuticallyeffective amount. For the proteins of the present invention, alone or aspart of a pharmaceutical composition, such doses are between about 0.01mg/kg and 100 mg/kg body weight, preferably between about 0.01 and 10mg/kg, body weight.

5. Utility

Proteins of the present invention when made and selected as disclosedare useful as potent inhibitors of blood coagulation in vitro and invivo. As such, these proteins are useful as in vitro diagnostic reagentsto prevent the clotting of blood and are also useful as in vivopharmaceutical agents to prevent or inhibit thrombosis or bloodcoagulation in mammals.

The proteins of the present invention are useful as in vitro diagnosticreagents for inhibiting clotting in blood drawing tubes. The use ofstoppered test tubes having a vacuum therein as a means to draw bloodobtained by venipuncture into the tube is well known in the medicalarts. Kasten, B. L., "Specimen Collection", Laboratory Test Handbook,2nd Edition, Lexi-Comp Inc., Cleveland pp. 16-17 (Edits. Jacobs, D. S.et al. 1990). Such vacuum tubes may be free of clot-inhibitingadditives, in which case, they are useful for the isolation of mammalianserum from the blood. They may alternatively contain clot-inhibitingadditives (such as heparin salts, EDTA salts, citrate salts or oxalatesalts), in which case, they are useful for the isolation of mammalianplasma from the blood. The proteins of the present invention are potentinhibitors of blood clotting and as such, can be incorporated into bloodcollection tubes to prevent clotting of the mammalian blood drawn intothem.

The proteins of the present invention are used alone, in combination ofother proteins of the present invention, or in combination with otherknown inhibitors of clotting, in the blood collection tubes, forexample, with heparin salts, EDTA salts, citrate salts or oxalate salts.

The amount to be added to such tubes, or effective amount, is thatamount sufficient to inhibit the formation of a blood clot whenmammalian blood is drawn into the tube. The proteins of the presentinvention are added to blood collection tubes in such amounts that, whencombined with 2 to 10 ml of mammalian blood, the concentration of suchproteins will be sufficient to inhibit the formation of blood clots.Typically, this effective amount is that required to give a finalconcentration in the blood of about 1 to 10,000 nM, with 10 to 1000 nMbeing preferred.

The proteins of the present invention may also be used to preparediagnostic compositions. In one embodiment, diagnostic compositions areprepared by dissolving the proteins of the present invention intodiagnostically acceptable carriers, which carriers include phosphatebuffered saline (0.01 M sodium phosphate+0.15 M sodium chloride, pH 7.2or Tris buffered saline (0.05 M Tris-HCl+0.15 M sodium chloride, pH8.0). In another embodiment, the proteins of the present invention maybe blended with other solid diagnostically acceptable carriers bymethods well known in the art to provide solid diagnostic compositions.These carriers include buffer salts.

The addition of the proteins of the present invention to bloodcollection tubes may be accomplished by methods well known in the art,which methods include introduction of a liquid diagnostic compositionthereof, a solid diagnostic composition thereof, or a liquid diagnosticcomposition which is lyophilized in such tubes to a solid plug of asolid diagnostic composition.

The use of blood collection tubes containing the diagnostic compositionsof the present invention comprises contacting a effective amount of suchdiagnostic composition with mammalian blood drawn into the tube.Typically, when a sample of 2 to 10 ml of mammalian blood is drawn intoa blood collection tube and contacted with such diagnostic compositiontherein; the effective amount to be used will include thoseconcentrations of the proteins formulated as a diagnostic compositionwhich in the blood sample are sufficient to inhibit the formation ofblood clots. Preferred effective concentrations would be about 1 to10,000 nM, with 10 to 1000 nM being especially preferred.

According to an alternate aspect of our invention, the proteins of thepresent invention are also useful as pharmaceutical agents forpreventing or inhibiting thrombosis or blood coagulation in a mammal.This prevention or inhibition of thrombosis or blood coagulationincludes preventing or inhibiting abnormal thrombosis.

Conditions characterized by abnormal thrombosis are well known in themedical arts and include those involving the arterial and venousvasculature of mammals. With respect to the coronary arterialvasculature, abnormal thrombosis (thrombus formation) characterizes therupture of an established atherosclerotic plaque which is the majorcause of acute myocardial infarction and unstable angina, and alsocharacterizes the occlusive coronary thrombus formation resulting fromeither thrombolytic therapy or percutaneous transluminal coronaryangioplasty (PTCA). With respect to the venous vasculature, abnormalthrombosis characterizes the condition observed in patients undergoingmajor surgery in the lower extremities or the abdominal area who oftensuffer from thrombus formation in the venous vasculature resulting inreduced blood flow to the affected extremity and a predisposition forpulmonary embolism. Abnormal thrombosis further characterizesdisseminated intravascular coagulopathy which commonly occurs withinboth vascular systems during septic shock, certain viral infections andcancer, a condition wherein there is rapid consumption of coagulationfactors and systemic coagulation which results in the formation oflife-threatening thrombi occurring throughout the microvasculatureleading to widespread organ failure.

The NAP proteins of the present invention also are useful immunogensagainst which antibodies are raised. Antibodies, both monoclonal andpolyclonal, directed to a NAP are useful for diagnostic purposes and forthe identification of concentration levels of NAP in various biologicalfluids. Immunoassay utilizing these antibodies may be used as adiagnostic test, such as to detect infection of a mammalian host by aparasitic worm or to detect NAP from a parasitic worm in a tissue of themammalian host. Also, such immunoassays may be used in the detection andisolation of NAP from tissue homogenates, cloned cells and the like.

NAP can be used, with suitable adjuvants, as a vaccine against parasiticworm infections in mammals. Immunization with NAP vaccine may be used inboth the prophylaxis and therapy of parasitic infections. Diseaseconditions caused by parasitic worms may be treated by administering toan animal infected with these parasites anti-NAP antibody.

NAP proteins of this invention having serine protease inhibitoryactivity also are useful in conditions or assays where the inhibition ofserine protease is desired. For example, NAP proteins that inhibit theserine protease trypsin or elastase are useful for treatment of acutepancreatitis or acute inflammatory response mediated by leukocytes,respectively.

The recombinant cDNA molecules encoding the proteins of the presentinvention are useful in one aspect for isolating other recombinant cDNAmolecules which also encode the proteins of the present invention. Inanother aspect, they are useful for expression of the proteins of thepresent invention in host cells.

The nucleotide probes of the present invention are useful to identifyand isolate nucleic acid encoding NAPs from nematodes or otherorganisms. Additionally, the nucleotide probes are useful diagnosticreagents to detect the presence of nematode-encoding nucleic acid in asample, such as a bodily fluid or tissue from a mammal suspected ofinfection by nematode. The probes can be used directly, with appropriatelabel for detection, to detect the presence of nematode nucleic acid, orcan be used in a mores indirect manner, such as in a PCR-type reaction,to amplify nematode nucleic acid that may be present in the sample fordetection. The conditions of such methods and diagnostic assays arereadily available in the art.

To assist in understanding, the present invention will now be be furtherillustrated by the following examples. These examples as they relate tothis invention should not be construed as specifically limiting theinvention and such variations of the invention, now known or laterdeveloped, which would be within the purview of one skilled in the artare considered to fall within the scope of the invention as describedherein and hereinafter claimed.

EXAMPLES Example 1 Isolation of Novel Anticoagulant Protein (NAP) fromAncylostoma caninum

(A) Preparation of the Ancylostoma caniumum Lysate

Frozen canine hookworms, Ancylostoma caninum, were obtained fromAntibody Systems (Bedford, Tex.). Hookworms were stored at -80° C. untilused for homogenate.

Hookworms were frozen in liquid nitrogen and ground in a mortar followedby a homogenization on ice in homogenization buffer using a PotterShomogenizer with a teflon piston (B.Braun Melsungen AG, Germany). Thehomogenization buffer contained: 0.02 M Tris-HCl pH 7.4, 0.05 M NaCl,0.001 M MgCl₂, 0.001 M CaCl₂, 1.0×10⁻⁵ M E-64 protease inhibitor(Boehringer Mannheim, Germany), 1.0×10⁻⁵ M pepstatin A(isovaleryl-Val-Val-4-amino-3-hydroxy-6-methyl-heptanoyl-Ala-4-amino-3-hydroxy-6-methylheptanoicacid, ICN Biomedicals, CA), 1.0×10⁻⁵ M chymostatin (Boehringer),1.0×10⁻⁵ M leupeptin (ICN), 5×10⁻⁵ M AEBSF(4-(2-aminoethyl)-benzenesulfonyl fluoride, ICN), and 5% (v/v) glycerol.Approximately 4 ml of homogenization buffer was used to homogenize eachgram of frozen worms (approximately 500 worms). Insoluble material waspelleted by two sequential centrifugation steps: 19,000×g_(max) at 4° C.for 30 minutes followed by 110,000×g_(max) at 4° C. for 40 minutes. Thesupernatant solution was clarified by passage through a 0.45 micrometercellulose acetate filter (Corning, N.Y.) to give Ancylostoma caniumumlysate.

(B) Concanavalin A Sepharose Chromatography

Ancylostoma caniumum lysate (100 ml) was adsorbed onto 22 ml ofConcanavalin A Sepharose (Pharmacia, Sweden) pre-equilibrated with Con Abuffer (0.02 M Tris-HCl, pH 7.4, 1 M NaCl, 0.002 M CaCl₂) by loading itonto a 1.6×11 cm column of this gel at a flow rate of 3 ml/minute (90cm/hour). The column was at ambient temperature while the reservoir oflysate was maintained at ice bath temperature throughout the procedure.The column was subsequently washed with 2 column volumes of Con Abuffer. The column flow-through and wash were collected (approximately150 ml) and stored at -80° C. until further processing was done.

(C) Anion-Exchange Chromatography

The flow-through and wash of the Concanavalin A Sepharose column wasbuffered by adding solid sodium acetate to a final concentration of 12.5mM. The conductivity was reduced by dilution with milliQ water and thepH was adjusted with HCl to pH 5.3. The precipitate formed during pHadjustment was pelleted by centrifugation 15,000×g_(max) at 4° C. for 15minutes. The supernatant solution was clarified by passage through a 0.2micrometer cellulose acetate filter (Corning, N.Y.).

This clarified solution (total volume approximately 600 ml) was loadedon to a Poros20 HQ (Perseptive Biosystems, MA) 1×2 cm columnpre-equilibrated with Anion buffer (0.05 M Na acetate, pH 5.3, 0.1 MNaCl) at a flow rate of 10 ml/minute (800 cm/hour). The column and thesolution added were at ambient temperature throughout this purificationstep. The column was subsequently washed with 10 column volumes of Anionbuffer.

Material that had inhibitory activity, detected following the procedurebelow, in the factor Xa amidolytic assay was eluted with Cation buffercontaining 0.55 M NaCl at a flow rate of 5 ml/minute (400 cm/hour).

A sample of solution was tested in a factor Xa amidolytic assay asfollows. Reaction mixtures (150 microliters) were prepared in 96-wellplates containing factor Xa and various dilutions of the sample in assaybuffer (100 mM Tris-HCl pH 7.4; 140 mM NaCl; 0.1% BSA). Human factor Xwas purchased from Enzyme Research Laboratories (South Bend, Ind., USA)and activated with Russell's Viper venom using the procedure of Bock, P.E., Craig, P. A., Olson, S. T., and Singh P., Arch. Biochem. Biophys.,273: 375-388 (1989). Following a 30 minute incubation at ambienttemperature, the enzymatic reactions were initiated by addition of 50microliters of a 1 mM substrate solution in water(N-alpha-benzyloxycarbonyl-D-arginyl-L-glycyl-L-argininep-nitroanilide-dihydrochloride; S-2765; Chromogenix, Molndal, Sweden) toyield final concentrations of 0.2 nM factor Xa and 0.25 mM S-2765.Substrate hydrolysis was monitored by continuously measuring absorbanceat 405 nm using a Vmax kinetic plate reader (Molecular Devices, MenloPark, Calif., USA).

(D) Heat Treatment

Half of the 0.55 M NaCl elution pool (3 ml) from anion-exchangechromatography was neutralized by adding 1 M Tris-HCl, pH 7.5 to a finalconcentration of 50 mM, incubated for 5 minutes at 90° C. in a glasstube and subsequently cooled rapidly on ice. Insoluble material waspelleted by centrifugation 19,000×g_(max) at 4° C. for 20 minutes. Thesupernatant contained material which inhibited factor Xa in the factorXa amidolytic assay. About 89% of the factor Xa inhibitory activity wasrecovered in the supernatant, after this heat treatment after accountingfor dilution.

(E) Molecular Sieve Chromatography using Superdex30 (alternative for theheat treatment step)

Half of the 0.55 M NaCl elution pool (3 ml) from anion-exchangechromatography was loaded on a Superdex30 PG (Pharmacia, Sweden) 1.6×66cm column pre-equilibrated with 0.01 M sodium phosphate, pH 7.4, 0.15 MNaCl at 24° C. The chromatography was conducted at a flow rate of 2ml/minute. The factor Xa inhibitory activity (determined in the factorXa amidolytic assay) eluted 56-64 ml into the run (K_(av) of 0.207).This elution volume would be expected for a globular protein with amolecular mass of 14,000 daltons.

(F) Reverse Phase Chromatography

Hookworm lysate which was fractionated by chromatography on ConcanavalinA Sepharose, anion-exchange and Superdex30 (or with the alternative heattreatment step) was loaded on to a 0.46×25 cm C18 column (218TP54 Vydac;Hesperia, Calif.) which was then developed with a linear gradient of10-35% acetonitrile in 0.1% (v/v) trifluoroacetic acid at a flow rate of1 ml/minute with a rate of 0.625 % change in acetonitrile/minute. FXainhibitory activity (determined in the factor Xa amidolytic assay)eluted at approximately 30% acetonitrile. The HPLC runs were performedon a Vista 5500 connected with a Polychrom 9600 detector set at 215 nm(Varian, Calif.). Detector signals were integrated on a 4290 integratorobtained from the same company. Factor Xa inhibitory activity containingfractions were vacuum dried and then redissolved in PBS (0.01 M sodiumphosphate, pH 7.4, 0.15 M NaCl).

These fractions were pooled and then loaded on to a 0.46×25 cm C18column (218TP54 Vydac; Hesperia, Calif.) which was developed with alinear gradient of 10-35% acetonitrile in 0.1% trifluoroacetic acid at aflow rate of 1 ml/minute with a slower rate of 0.4% change inacetonitrile/minute. Factor Xa inhibitory activity containing fractionswere pooled and subsequently vacuum dried.

(G) Molecular Weight Determination of NAP from Ancylostoma caninum

The estimated mass for NAP isolated as described in this example wasdetermined using electrospray ionisation mass spectrometry.

A vacuum-dried pellet of NAP was dissolved in 50% (v/v) acetonitrile, 1%(v/v) formic acid. Mass analysis was performed using a VG Bio-Q (FisonsInstruments, Manchester UK).

The NAP sample was pumped through a capillary and at its tip a highvoltage of 4 kV was applied. Under the influence of the high electricfield, the sample was sprayed out in droplets containing the proteinmolecules. Aided by the drying effect of a neutral gas (N₂) at 60° C.,the droplets were further reduced in size until all the solvent had beenevaporated and only the protein species remained in the gaseous form. Apopulation of protein species arose which differed from each other inone charge. With a quadrupole analyzer, the different Da/e(mass/charge)-values were detected. Calibration of the instrument wasaccomplished using Horse Heart Myoglobin (Sigma, Mo.).

The estimated mass of NAP isolated as described in sections A, B, C, D,and F of this example is 8734.60 daltons. The estimated mass of nativeNAP isolated as described in sections A, B, C, E, and F is 8735.67daltons.

(H) Amino Acid Sequencing of NAP from Ancylostoma caninum

Amino acid determination was performed on a 476-A Protein/PeptideSequencer with On Board Microgradient PTH Analyzer and Model 610A DataAnalysis System (Applied Biosystems, CA). Quantification of the residueswas performed by on-line analysis on the system computer (AppliedBiosystems, CA); residue assignment was performed by visual analysis ofthe HPLC chromatograms. The first twenty amino acids of theamino-terminus of native NAP were determined to be:

Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Trp Leu Asp Asp Cys Gly Thr GlnLys Pro [SEQ. ID. NO. 97].

The cysteine residues were not directly detected in this analysisbecause the sample was not reduced and subsequently alkylated. Cysteineswere assigned to the positions where no specific amino acid wasidentified.

Example 2 Cloning and Sequencing of NAP from Ancylostoma caninum

(A) Preparation of Hybridization Probe

Full-length cDNA clones encoding NAP were isolated by screening a cDNAlibrary, prepared from the mRNA isolated from the nematode, Ancylostomacaninum, with a radiolabeled degenerate oligonucleotide whose sequencewas based on the first eleven amino acids of the amino-terminus of NAPfrom A. caninum:

Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Trp [SEQ. ID. NO. 93].

The 33-mer oligonucleotide hybridization probe, designated YG99, had thefollowing sequence:

AAR GCi TAY CCi GAR TGY GGi GAR AAY GAR TGG (SEQ. ID. NO. 94]

where "R" refers to A or G; "Y" refers to T or C; and "i" refers toinosine. YG99 was radiolabeled by enzymatic 5'-end phosphorylation(5'-end labeling kit; Amersham, Buckinghamshire, England) using gamma-³²P-ATP (specific activity >7000 Ci/mmole; ICN, Costa Mesa, Calif., USA)and subsequently passed over a NAP™10 column (Pharmacia, Uppsala,Sweden).

(B) Preparation of cDNA Library

A cDNA library was constructed using described procedures (PromegaProtocols and Applications Guide 2nd Ed.; Promega Corp., Madison, Wis.,USA).

Adult hookworms, Ancylostoma caninum, were purchased from AntibodySystems (Bedford, Tex.). Poly(A+) RNA was prepared using the QuickPrepmRNA Purification Kit (Pharmacia). About 3 micrograms of mRNA werereverse transcribed using an oligo(dT)-NotI primer/adaptor,AATTCGCGGCCGC(T)₁₅ [SEQ. ID. NO. 95], (Promega Corp.) and AMV (AvianMyeloblastosis Virus) reverse transcriptase (Boehringer, Mannheim,Germany). The enzymes used for double-stranded cDNA synthesis were thefollowing: E. coli DNA polymerase I and RNaseH from Life Technologies(Gaithersburg, Md., USA) and T4 DNA polymerase from Pharmacia.

EcoRI linkers (pCGGAATTCCG) [SEQ. ID. NO. 98] were ligated onto theobtained cDNA after treatment with EcoRI methylase (RiboClone EcoRILinker Ligation System; Promega).

The cDNAs were digested with NotI and EcoRI, passed over a 1.5% agarosegel (all sizeable material was eluted using the Geneclean protocol,BIO101 Inc., La Jolla, Calif.), and unidirectionally ligated into theEcoRI-NotI arms of the lambda gt11 Sfi-NotI vector (Promega). After invitro packaging (GigapackII-Gold, Stratagene, La Jolla, Calif.)recombinant phage were obtained by infecting strain Y1090 (Promega).

The usefulness of the cDNA library was demonstrated by PCR analysis (Taqpolymerase from Boehringer; 30 temperature cycles: 1 minute at 95° C.; 1minute at 50° C.; 3 minutes at 72° C.) of a number of randomly pickedclones using the lambda gt11 primer #1218, having the sequence,GGTGGCGACG ACTCCTGGAG CCCG (New England Biolabs, Beverly, Mass., USA)[SEQ. ID. NO. 96]; targeting sequences located upstream of the cDNAinsert) in combination with the above-mentioned oligo(dT)-NotIprimer/adaptor; the majority of the clones was found to contain cDNAinserts of variable size.

(C) Identification of Clones

Approximately 1×10⁶ cDNA clones (duplicate plaque-lift filters wereprepared using Hybond™-N; Amersham) were screened with the radiolabeledYG99 oligonucleotide using the following pre-hybridization andhybridization conditions: 5×SSC (SSC: 150 mM NaCl, 15 mM trisodiumcitrate), 5×Denhardt's solution, 0.5% SDS, 100 micrograms/ml sonicatedfish sperm DNA (Boehringer), overnight at 42° C. The filters were washed4 times in 2×SSC, 0.1% SDS at 37° C. After exposure (about 72 hours) toX-ray film, a total of between 350 and 500 hybridization spots wereidentified.

Twenty-four positive clones, designated NAP1 through NAP24, weresubjected to a second hybridization round at lower plaque-density;except for NAP24, single plaques containing a homogeneous population oflambda phage were identified. The retained clones were analyzed by PCRamplifications (Taq polymerase from Boehringer; 30 temperature cycles: 1minute at 95° C.; 1 minute at 50° C.; 1.5 minutes at 72° C.) using theoligo(dT)-NotI primer (AATTCGCGGC CGC(T)₁₅) [SEQ. ID. NO. 95] incombination with either (i) YG99 or (ii) the lambda gt11 primer #1218.The majority of the clones (20 out of 23) yielded a fragment of about400 bp when the oligo(dT)-NotI/YG99 primer set was used and a fragmentof about 520 bp when the oligo(dT)-NotI/#1218 primer couple was used.Nineteen such possibly full-length clones were further characterized.

The cDNA inserts of five clones were subdcloned as SfiI-NotI fragmentson both pGEM-5Zf(-) and pGEM-9Zf(-) (Promega). Because the SfiI sites oflambda gt11 and pGEM-5Zf(-) are not compatible with one another, thecloning on this vector required the use of a small adaptor fragmentobtained after annealing the following two 5'-end phosphorylatedoligonucleotides: pTGGCCTAGCG TCAGGAGT [SEQ. ID. NO. 99] and pCCTGACGCTAGGCCATGG [SEQ. ID. NO. 100]. Following preparation of single-strandedDNA, the sequences of these cDNAs were determined with the dideoxy chaintermination method using primer #1233 having the sequence, AGCGGATAACAATTTCACAC AGGA (New England Biolabs) [SEQ. ID. NO. 101]. All fiveclones were found to be full-length including a complete secretionsignal. Clones NAP5, NAP7 and NAP22 were found to have an identicalcoding region. Clones NAP6 and NAP11 are also identical but differ fromthe NAP5 type of coding region. FIG. 1 depicts the nucleotide sequenceof the NAP5 gene and FIG. 2 depicts the amino acid sequence of theprotein encoded, AcaNAP5. Likewise, FIG. 3 depicts the nucleotidesequence of the NAP6 [SEQ. ID. NO. 5] gene and FIG. 4 depicts the aminoacid sequence of the protein encoded, AcaNAP6 [SEQ. ID. NO. 6].

Fourteen other possibly full-length clones were subjected to arestriction analysis. The above mentioned 400 bp PCR product obtainedwith the YG99/oligo(dT)-NotI primer couple, was digested with fourdifferent enzymes capable of discriminating between a NAP5- andNAP6-type of clone: Sau96I, Sau3AI, DdeI, and HpaII. The results wereconsistent with 10 out of the 14 clones being NAP5-type (e.g. NAP4,NAP8, NAP9, NAP15, NAP16, NAP17, NAP18, NAP20, NAP21, and NAP23) whilethe remaining four were NAP6-type (e.g. NAP10, NAP12, NAP14, and NAP19).

These clones were renamed to reflect origin from Ancylostoma caninum byplacing the letters Aca immediately before the NAP designation. Forexample, NAP5 became AcaNAP5, NAP6 became AcaNAP6 and so forth.

Example 3 Production and Purification Of Recombinant AcaNAP5 In P.pastoris

(A) Expression Vector Construction

The Pichia pastoris yeast expression system, including the E. coli/P.pastoris shuttle vector, pHILD2, has been described in a number ofUnited States patents. See, e.g., U.S. Pat. Nos. 5,330,901; 5,268,273;5,204,261; 5,166,329; 5,135,868; 5,122,465; 5,032,516; 5,004,688;5,002,876; 4,895,800; 4,885,242; 4,882,279; 4,879,231; 4,857,467;4,855,231; 4,837,148; 4,818,700; 4,812,405; 4,808,537; 4,777,242; and4,683,293.

The pYAX7SP8 vector used to direct expression and secretion ofrecombinant AcaNAP5 in P. pastoris was a derivative of the pHILD2plasmid (Despreaux, C. W. and Manning, R. F., Gene 131: 35-41 (1993)),having the same general structure. In addition to the transcription andrecombination elements of pHILD2 required for expression and chromosomalintegration in P. pastoris (see Stroman, D. W. et al., U.S. Pat. No.4,855,231), this vector contained a chimeric prepro leader sequenceinserted downstream of the alcohol oxidase (AOX1) promoter. The preproleader consisted of the P. pastoris acid phosphatase (PHO1) secretionsignal fused to a synthetic 19-amino acid pro-sequence. Thispro-sequence was one of the two 19-aa pro-sequences designed by Clementset al., Gene 106: 267-272 (1991) on the basis of the Saccharomycescerevisiae alpha-factor leader sequence. Engineered immediatelydownstream from the prepro leader sequence was a synthetic multi-cloningsite with recognition sequences for the enzymes StuI, SacII, EcoRI,BglII, NotI, XhoI, SpeI and BamHI to facilitate the cloning of foreigngenes. NAP as expressed from pYAM7SP8 in Pichia pastoris was firsttranslated an a prepro-product and subsequently processed by the hostcell to remove the pre- and pro-sequences.

The structure of this vector is shown in FIG. 12. The signal sequence(S) has the nucleic acid sequence: ATG TTC TCT CCA ATT TTG TCC TTG GAAATT ATT TTA GCT TTG GCT ACT TTG CAA TCT GTC TTC GCT [SEQ. ID. NO. 102].The pro sequence (P) has the nucleic acid sequence: CAG CCA GGT ATC TCCACT ACC GTT GGT TCC GCT GCC GAG GGT TCT TTG GAC AAG AGG [SEQ. ID. NO.103]. The multiple cloning site (MCS) has the nucleic acid sequence: CCTATC CGC GGA ATT CAG ATC TGA ATG CGG CCG CTC GAG ACT AGT GGA TCC [SEQ.ID. NO. 104].

The pGEM-9Zf(-) vector (Promega) containing the AcaNAP5 cDNA was used toisolate by amplification ("PCR-rescue") the region encoding the matureAcaNAP5 protein (using Vent polymerase from New England Biolabs,Beverly, Mass.; 20 temperature cycles: 1 minute at 94° C., 1 minute at50° C., and 1.5 minutes at 72° C.). The following oligonucleotideprimers were used:

YG101: GCTCGCTCTA-GAAGCTTCAG-ACATGTATAA-TCTCATGTTG-G [SEQ. ID. NO. 105]

YG103: AAGGCATACC-CGGAGTGTGG-TG [SEQ. ID. NO. 89]

The YG101 primer, targeting C-terminal sequences, contained anon-annealing extension which included XbaI and HindIII restrictionsites (underlined).

Following digestion with XbaI enzyme, the amplification product, havingthe expected size, was isolated from gel and subsequently enzymaticallyphosphorylated (T4 polynucleotide kinase from New England Biolabs,Beverly, Mass.). After heat-inactivation (10 minutes at at 70° C.) ofthe kinase, the blunt-ended/XbaI fragment was directionally cloned intothe vector pYAM7SP8 for expression purposes. The recipientvector-fragment from pYAM7SP8 was prepared by StuI-SpeI restriction, andpurified from agarose gel. The E. coli strain, WK6 [Zell, R. and Fritz,H.-J., EMBO J., 6: 1809-1815 (1987)], was transformed with the ligationmixture, and ampicillin resistant clones were selected.

Based on restriction analysis, a plasmid clone containing an insert ofthe expected size, designated pYAM7SP-NAP5, was retained for furthercharacterization. Sequence determination of the clone pYAM7SP-NAP5confirmed the precise insertion of the mature AcaNAP5 coding region infusion with the prepro leader signal, as predicted by the constructionscheme, as well as the absence of unwanted mutations in the codingregion.

(B) Expression Of Recombinant AcaNAPS In P. pastoris

The Pichia pastoris strain GTS115 (his4) has been described in Stroman,D. W. et al., U.S. Pat. No. 4,855,231. All of the P. pastorismanipulations were performed essentially as described in Stroman, D. W.et al., U.S. Pat. No. 4,855,231.

About 1 microgram of pYAM7SP-NAP5 plasmid DNA was electroporated intothe strain GTS115 using a standard electroporation protocol. The plasmidwas previously linearized by SalI digestion, which theoreticallyfacilitates the targeting and integration of the plasmid into the his4chromosomal locus.

The selection of a AcaNAP5 high-expressor strain was performedessentially as described hereinbelow. His+ transformants were recoveredon MD plates (Yeast Nitrogen Base without amino acids (DIFCO), 13.4 g/l;Biotin, 400 micrograms/L; D-glucose, 20 g/l; agar, 15 g/l). Singlecolonies (n=60) originating from the electroporation were inoculatedinto 100 microliters of FN22-glycerol-PTm1 medium in wells of a 96-wellplate and were allowed to grow on a plate-agitator at 30° C. for 24hours. One liter of FN22-glycerol-PTM1 medium contained 42.87 g KH2PO₄,5 g (NH₄)₂ SO₄, 1 g CaSO₄.2H₂ O, 14.28 g K₂ SO₄, 11.7 g MgSO₄.7H₂ O, 50g glycerol sterilized as a 100 ml solution, and 1 ml of PTM1 tracemineral mix filter-sterilized. The FM22 part of the medium was preparedas a 900 ml solution adjusted to pH 4.9 with KOH and sterile filtered.One liter of the PTM1 mix contained 6 g CuSO₄.5H₂ O, 0.8 g KI, 3 gMnSO₄.H₂ O, 0.2 g NaMoO₄.2H₂ O, 0.02 g H₃ BO₃, 0.5 g COCl₂.6H₂ O, 20 gZnCl₂, 5 ml H₂ SO₄, 65 g FeSO₄.7H₂ O, 0.2 g biotin.

The cells were then pelleted and resuspended in fresh FM22-methanol-PTM1medium (same composition as above except that the 50 g glycerol wasreplaced by 0.5% (v/v) methanol in order to induce expression of theAOX1 promoter). After an additional incubation period of 24 hours at 30°C., the supernatants of the mini-cultures were tested for the presenceof secreted AcaNAP5. Two clones that directed a high level of synthesisand secretion of AcaNAP5, as shown by the appearance of high factor Xainhibitory activity in the culture medium (as measured by the amidolyticfactor Xa assay described in Example 1), were selected. After a secondscreening round, using the same procedure, but this time at theshake-flask level, one isolated host cell was chosen and designated P.pastoris GTS115/7SP-NAP5.

The host cell, GTS115/7SP-NAP5, was shown to have a wild typemethanol-utilisation phenotype (Mut⁺), which demonstrated that theintegration of the expression cassette into the chromosome of GTS115 didnot alter the functionality of the genomic AOX1 gene.

Subsequent production of recombinant AcaNAP5 material was performed inshake flask cultures, as described in Stroman, D. W. et al., U.S. Pat.No. 4,855,231. The recombinant product was purified from Pichia pastoriscell supernatant as described below.

(C) Purification of recombinant AcaNAP5.

(1) Cation Exchange Chromatography

Following expression, the culture supernatant from GTS115/75SP-NAP5 (100ml) was centrifuged at 16000 r.p.m. (about 30,000×g) for 20 minutesbefore the pH was adjusted with 1 N HCl to pH 3. The conductivity of thesupernatant was decreased to less than 10 mS/cm by adding MilliQ water.The diluted supernatant was clarified by passage through a 0.22micrometer cellulose acetate filter (Corning Inc., Corning, N.Y., USA)

The total volume (approximately 500 ml) of supernatant was loaded on aPoros20 HS (Perseptive Biosystems, MA) 1×2 cm column pre-equilibratedwith Cation Buffer (0.05 M sodium citrate, pH 3) at a flow rate of 5ml/minute (400 cm/hour). The column and the sample were at ambienttemperature throughout this purification step. The column wassubsequently washed with 50 column volumes Cation Buffer. Material thathad inhibitory activity in a factor Xa amidolytic assay was eluted withCation Buffer containing 1 M NaCl at a flow rate of 2 ml/minute.

(2) Molecular Sieve Chromatography Using Superdex30

The 1 M NaCl elution pool containing the inhibitory material (3 ml) fromthe cation-exchange column was loaded on a Superdex30 PG (Pharmacia,Sweden) 1.6×66 cm column pre-equilibrated with 0.01 M sodium phosphate,pH 7.4, 0.15 M NaCl at ambient temperature. The chromatography wasconducted at a flow rate of 2 ml/minute. The factor Xa inhibitoryactivity eluted 56-64 ml into the run (K_(av) of 0.207). This is thesame elution volume as determined for the native molecule (Example 1,part E).

(3) Reverse Phase Chromatography

1 ml of the pooled fractions from the gel filtration chromatography wasloaded on to a 0.46×25 cm C18 column (218TP54 Vydac; Hesperia, Calif.)which was then developed with a linear gradient of 10-35% acetonitrilein 0.1% (v/v) trifluoroacetic acid at 1 ml/minute with a rate of 0.4%change in acetonitrile/minute. Factor Xa inhibitory activity, assayed asin Example 1, eluted around 30-35% acetonitrile and was present inseveral fractions. HPLC runs were performed on the same system asdescribed in Example 1. Fractions from several runs on this columncontaining the factor Xa inhibitory activity were pooled and vacuumdried.

(4) Molecular Weight Determination of Recombinant AcaNAP5

The estimated mass for the main constituent isolated as described insections (1) to (3) of this example were determined using the sameelectrospray ionisation mass spectrometry system as described in Example1.

The estimated mass of recombinant AcaNAPS was 8735.69 Daltons.

(5) Amino Acid Sequencing of Recombinant AcaNAP5

Following purification by section (1) to (3) of this example, therecombinant AcaNAP5 from Pichia pastoris was subjected to amino acidsequence analysis as described in Example 1. The first five amino acidsof the amino-terminus of AcaNAP5 were determined to be:Lys-Ala-Tyr-Pro-Glu [SEQ. ID. NO. 106]. The sequence was identical tothe native NAP protein (see Example 1).

Example 4 Production and Purification Of Recombinant AcaNAP6 In P.pastoris

(A) Expression Vector Construction

The expression vector, pYAM7SP-NAP6, was made in the same manner asdescribed for pYAM7SP-NAP5 in Example 3.

(B) Expression Of Recombinant AcaNAP6 In P. pastoris

The vector, pYAM7SP-NAP6, was used to transform the Pichia strain GTS115(his4) as described in Example 3.

(C) Purification of AcaNAP6

The recombinant AcaNAP6, expressed from Pichia strain GTS115 (his4)transformed with the expression vector, pYAM7SP-NAP6, was purified asdescribed for recombinant AcaNAP5 in Example 3.

The estimated mass of recombinant AcaNAP6 was determined, as describedin Example 3, to be 8393.84 Daltons.

The majority of the AcaNAP6 preparation had the followingamino-terminus: Lys-Ala-Tyr-Pro-Glu [SEQ. ID. NO. 106].

Example 5 Expression Of Recombinant Pro-AcaNAP5 In COS Cells

(A) Expression Vector Construction

The pGEM-9Zf(-) vector (Promega Corporation, Madison, Wis., USA) intowhich the AcaNAP5 cDNA was subcloned, served as target for PCR-rescue ofthe entire AcaNAP5 coding region, including the native secretion signal(using Vent polymerase from New England Biolabs, Beverly, Mass., USA; 20temperature cycles: 1 minute at 95° C., 1 minute at 50° C., and 1.5minutes at 72° C.). The oligonucleotide primers used were: (1) YG101,targeting the 3'-end of the gene encoding a NAP and having the sequence,GCTCGCTCTA GAAGCTTCAG ACATGTATAA TCTCATGTTG G [SEQ, ID. NO. 105], and(2) YG102, targeting the 5'-end of the gene encoding a NAP and havingthe sequence, GACCAGTCTA GACAATGAAG ATGCTTTACG CTATCG [SEQ. ID. NO.107]. These primers contain non-annealing extensions which include XbaIrestriction sites (underlined).

Following digestion with XbaI enzyme, the amplification product havingthe expected size was isolated from an agarose gel and subsequentlysubstituted for the about 450 basepair XbaI stuffer fragment of thepEF-BOS vector [Mizushima, S. and Nagata, S., Nucl. Acids Res., 18: 5322(1990)] for expression purposes. The recipient vector-fragment wasprepared by XbaI digestion and purified from an agarose gel.

E. coli strain WK6 [Zell, R. and Fritz, H.-J., EMBO J., 6: 1809-1815(1987)] was transformed with the ligation mixture. Thirty randomlypicked ampicillin-resistant transformants were subjected to PCR analysis(Taq polymerase from Life Technologies Inc., Gaithersburg, Md., USA; 30cycles of amplification with the following temperature program: 1 minuteat 95° C., 1 minute at 50° C., and 1 minute at 72° C.). Oligonucleotideprimers used were: (i) YG103 having the sequence, AAGGCATACC CGGAGTGTGGTG [SEQ. ID. NO. 89], and matching the amino-terminus of the regionencoding mature NAP, and (ii) YG60 having the sequence, GTGGGAGACCTGATACTCTC AAG [SEQ. ID. NO. 108], and targeting vector sequencesdownstream of the site of insertion, i.e., in the 3'-untranslated regionof the pEF-BOS expression cassette. Only clones that harbor the insertin the desired orientation can yield a PCR fragment of predictablelength (about 250 basepair). Two such clones were further characterizedby sequence determination and were found to contain the desired XbaIinsert. One of the clones, designated pEF-BOS-NAP5, was used totransfect COS cells.

(B) Transfection of COS Cells

COS-7 cells (ATCC CRL 1651) were transfected with pEF-BOS-NAP5, PEF-BOScontaining an irrelevant insert or with omission of DNA (mocktransfections) using DEAE-dextran. The following media and stocksolutions were used with the DEAE-dextran method:

(1) COS-medium: DMEM; 10% FBS (incubated for 30 minutes at 56° C.);0.03% L-glutamine; penicillin (50 I.U./ml) and streptomycin (50micrograms/ml) (all products from Life Technologies).

(2) MEM-HEPES: MEM medium from Life Technologies Inc., reconstitutedaccording to the manufacturer's specifications; containing a 25 mM finalconcentration of HEPES; adjusted to pH 7.1 before filtration (0.22micrometer).

(3) DNA solution: 6 micrograms DNA per 3 ml MEM-HEPES

(4) DEAE-dextran solution: 30 microliters DEAE-dextran stock (Pharmacia,Uppsala, Sweden; 100 mg/ml in H₂ O) per 3 ml MEM-HEPES.

(5) Transfection mixture: 3 ml of the DEAE-dextran solution is added to3 ml of the DNA solution and the mixture is left to stand for 30 minutesat ambient temperature.

(6) Chloroquine solution: a 1:100 dilution of chloroquine stock (Sigma,St. Louis, Mo., USA; 10 mM in water; filtered through a 0.22 micrometermembrane) in COS medium.

Transient transfection of the COS cells was performed as follows. COScells (about 3.5×10⁶), cultured in a 175 cm² Nunc TC-flask (LifeTechnologies Inc.) were washed once with MEM-HEPES. Six ml of thetransfection mixture were pipetted onto the washed cells. Afterincubation for 30 minutes at ambient temperature, 48 ml of thechloroquine solution were added and the cells were incubated for another4 hours at 37° C. The cells were washed one time with fresh COS-mediumand finally incubated in 50 ml of the same medium at 37° C.

(C) Culturing of Transfected COS Cells

Three, four, and five days after transfection a sample of the culturesupernatants was tested in a factor Xa amidolytic assay according to theprocedure in Example 1. The results clearly demonstrated that factor Xainhibitory activity was accumulating in the culture supernatant of thecells transfected with pEF-BOS-NAP5.

The COS culture supernatant was harvested five days after transfectionand the NAP protein purified as described in Example 6.

Example 6 Purification Of Recombinant Pro-AcaNAP5

(A) Anion Exchange Chromatography

The COS culture supernatant containing Pro-AcaNAP5 was centrifuged at1500 r.p.m. (about 500×g) for 10 minutes before adding solid sodiumacetate to a final concentration of 50 mM. The following proteaseinhibitors were added (all protease inhibitors from ICN Biomedicals Inc,Costa Mesa, Calif., USA): 1.0×10⁻⁵ M pepstatin A(isovaleryl-Val-Val-4-amino-3-hydroxy-6-methyl-heptanoyl-Ala-4-amino-3-hydroxy-6-methylheptanoicacid), 1.0×10⁻⁵ M leupeptin, 5×10⁻⁵ M AEBSF(4-(2-aminoethyl)-benzenesulfonyl fluoride). The pH was adjusted withHCl to pH 5.3. The supernatant was clarified by passage through a 0.2micrometer cellulose acetate filter (Corning Inc., Corning, N.Y., USA).

The clarified supernatant (total volume approximately 300 ml) was loadedon a Poros20 HQ (Perseptive Biosystems, MA) 1×2 cm columnpre-equilibrated with Anion buffer (0.05 M sodium acetate, pH 5.3, 0.1 MNaCl) at a flow rate of 10 ml/minute (800 cm/hour). The column and thesample were at ambient temperature throughout this purification step.The column was subsequently washed with at least 10 column volumes ofAnion buffer. Material that had inhibitory activity in a factor Xaamidolytic assay was eluted with Anion buffer containing 0.55 M NaCl ata flow rate of 5 ml/minute (400 cm/hour) and was collected.

(B) Molecular Sieve Chromatography Using Superdex30

The 0.55 M NaCl elution pool (3 ml) from the anion-exchangechromatography was loaded on a Superdex30 PG (Pharmacia, Sweden) 1.6×66cm column pre-equilibrated with 0.01 M sodium phosphate, pH 7.4, 0.15 MNaCl at 24° C. The chromatography was conducted at a flow rate of 2ml/minute. Material which was inhibitory in the Factor Xa amidolyticassay eluted 56-64 ml into the run (K_(av) of 0.207). This was exactlythe same elution volume as determined for the native molecule.

(C) Heat Treatment

The total pool of fractions having factor Xa inhibitory activity wasincubated for 5 minutes at 90° C. in a glass tube and subsequentlycooled rapidly on ice. Insoluble material was pelleted by centrifugation19,000×g_(max) at 4° C. for 20 minutes. The supernatant contained all ofthe factor Xa inhibitory activity.

(D) Reverse Phase HPLC Chromatography

The supernatant of the heat-treated sample was loaded onto a 0.46×25 cmC18 column (218TP54 Vydac; Hesperia, Calif.) which was then developedwith a linear gradient of 10-35% acetonitrile in 0.1% (v/v)trifluoroacetic acid at 1 ml/minute with a rate of 0.4% change inacetonitrile/minute. Factor Xa inhibitory activity eluted atapproximately 30% acetonitrile. The HPLC runs were performed on the samesystem as described in Example 1. Factor Xa inhibitoryactivity-containing fractions were vacuum dried.

(E) Molecular Weight Determination

The estimated mass for recombinant Pro-AcaNAP5, isolated as described insections A-D of this example, was determined using the same electrosprayionisation mass spectrometry system as described in Example 1.

The estimated mass of recombinant Pro-AcaNAP5 was 9248.4 daltons.

(F) Amino Acid Sequencing

Following purification, the recombinant Pro-AcaNAP5 from COS cells wassubjected to amino acid analysis to determine its amino-terminussequence, as described in Example 1. The first nine amino acids of theamino-terminus of Pro-AcaNAP5 was determined to be: Arg Thr Val Arg LysAla Tyr Pro Glu [SEQ. ID. NO. 109]. Compared to the native AcaNAP5protein (see Example 1), Pro-AcaNAP5 possesses four additional aminoacids on its N-terminus. The amino acid sequence of Pro-AcaNAP5 is shownin FIG. 5.

Example 7 Expression Of Recombinant Pro-AcaNAP6 In COS Cells

Pro-AcaNAP6 was transiently produced in COS cells essentially asdescribed for Pro-AcaNAP5 in Example 5.

The AcaNAP6 coding region, including the secretion signal, wasPCR-rescued with the same two oligonucleotide primers used for AcaNAP5:(1) YG101 targeting the 3'-end of the gene and having the sequence,GCTCGCTCTA GAAGCTTCAG ACATGTATAA TCTCATGTTG G [SEQ. ID. NO. 105], and(2) YG102 targeting the 5'-end of the gene and having the sequence,GACCAGTCTA GACAATGAAG ATGCTTTACG CTATCG [SEQ. ID. NO. 107]. TheYG101-primer contains a non-matching nucleotide when used with AcaNAP6as target (underlined T-residue; compare with FIG. 1 and FIG. 3); thismismatch results in the replacement an ATT Ile-codon by an ATAIle-codon. The mismatch did not markedly influence the amplificationefficiency.

The following modification from Example 5 was introduced: twenty-fourhours after transfection of the COS cells (which is described in Example5, section B) the COS-medium containing 10% FBS was replaced with 50 mlof a medium consisting of a 1:1 mixture of DMEM and Nutrient MixtureHam's F-12 (Life Technologies). The cells then were further incubated at37° C. and the production of factor Xa inhibitory activity detected asdescribed in Example 5.

Example 8 Purification Of Recombinant Pro-AcaNAP6

(A) Anion Exchange Chromatography

The COS culture supernatant containing Pro-AcaNAP6 was centrifuged at1500 r.p.m. for 10 minutes before adding solid sodium acetate to a finalconcentration of 50 mM. The following protease inhibitors were added(all protease inhibitors from ICN Biomedicals Inc, Costa Mesa, Calif.,USA): 1.0×10⁻⁵ M pepstatin A(isovaleryl-Val-Val-4-amino-3-hydroxy-6-methyl-heptanoyl-Ala-4-amino-3-hydroxy-6-methylheptanoicacid), 1.0×10⁻⁵ M leupeptin, 5×10⁻⁵ M AEBSF(4-(2-aminoethyl)-benzenesulfonyl fluoride). The pH was adjusted withHCl to pH 5.3. The supernatant was clarified by passage through a 0.2micrometer cellulose acetate filter (Corning Inc., Corning, N.Y., USA).

The clarified supernatant (total volume approximately 450 ml) was loadedon a Poros20 HQ (Perseptive Biosystems, MA) 1×2 cm columnpre-equilibrated with Anion buffer (0.05 M Na sodium acetate, pH 5.3,0.1 M NaCl) at a flow rate of 10 ml/minute (800 cm/hour). The column andthe sample were at ambient temperature throughout this purificationstep. The column was subsequently washed with at least 10 column volumesof Anion buffer. Material that had inhibitory activity in a factor Xaamidolytic assay was eluted with Anion buffer containing 0.55 M NaCl ata flow rate of 5 ml/minute (400 cm/hour) and was collected.

(B) Molecular Sieve Chromatography Using Superdex30

The 0.55 M NaCl elution pool (3 ml) from the anion-exchangechromatography was loaded on a Superdex30 PG (Pharmacia, Sweden) 1.6×66cm column pre-equilibrated with 0.01 M sodium phosphate, pH 7.4, 0.15 MNaCl at 24° C. The chromatography was conducted at a flow rate of 2ml/minute. Material which was inhibitory in the Factor Xa amidolyticassay eluted 56-64 ml into the run (K_(av) of 0.207). This was exactlythe same elution volume as determined for the native NAP.

(C) Reverse Phase HPLC Chromatography

The pooled fractions from the gel filtration were loaded onto a 0.46×25cm C18 column (218TP54 Vydac; Hesperia, Calif.) which then was developedwith a linear gradient of 10-35% acetonitrile in 0.1% (v/v)trifluoroacetic acid at a flow rate of 1 ml/minute with a rate of 0.4%change in acetonitrile/minute. Factor Xa inhibitory activity (assayedaccording to Example 1) eluted at approximately 30% acetonitrile. TheHPLC runs were performed on the same system as described in Example 1.Factor Xa inhibitory activity containing-fractions were vacuum dried.

(D) Molecular Weight Determination

The estimated mass for recombinant Pro-AcaNAP6, isolated as described insections A to C of this example, was determined using the sameelectrospray ionisation mass spectrometry system as described in Example1.

The estimated mass of recombinant Pro-AcaNAP6 was 8906.9 daltons.

(E) Amino Acid Sequencing

Following purification, the recombinant Pro-AcaNAP6 from COS cells wassubjected to amino acid sequence analysis as described in Example 1. Thefirst five amino acids of the N-terminus of Pro-AcaNAP6 were determinedto be: Arg Thr Val Arg Lys [SEQ. ID. NO. 110]. Compared to the nativeNAP protein (see Example 1), Pro-AcaNAP6 possesses four additional aminoacids on its amino-terminus. The amino acid sequence of Pro-AcaNAP6 isshown in FIG. 6 [SEQ. ID. NO. 8].

Example 9 The Use of NAP DNA Sequences to Isolate Genes Encoding OtherNAP Proteins

The AcaNAP5 and AcaNAP6 cDNA sequences (from Example 2) were used toisolate related molecules from other parasitic species bycross-hybridization.

The pGEM-9Zf(-) vectors (Promega) containing the AcaNAP5 and AcaNAP6cDNAs were used to PCR-rescue the regions encoding the mature NAPproteins (Taq polymerase from Life Technologies; 20 temperature cycles:1 minute at 95° C., 1 minute at 50° C., and 1.5 minutes at 72° C.). Theoligonucleotide primers used were: (1) YG109, targeting the C-terminalsequences of cDNA encoding NAP, and having the sequence,TCAGACATGT-ATAATCTCAT-GTTGG [SEQ. ID. NO. 88], and (2) YG103 having thesequence, AAGGCATACC-CGGAGTGTGG-TG [SEQ. ID. NO. 89]. The YG109 primercontains a single nucleotide mismatch (underlined T-residue; comparewith the sequences shown in FIGS. 1 and 3) when used with AcaNAP6 astarget. This did not markedly influence the amplification efficiency.The correctly sized PCR products (about 230 basepairs) were bothisolated from a 1.5% agarose gel. An equimolar mixture was radiolabeledby random primer extension (T7 QuickPrime kit; Pharmacia) andsubsequently passed over a Bio-Spin 30 column (Bio-Rad, Richmond,Calif., USA).

Ancylostoma ceylanicum (Ace), Ancylostoma duodenale (Adu), andHeligmosomoides polygyrus (Hpo) cDNA libraries were prepared essentiallyas described for Ancylostoma caninum in Example 2.

Ancylostoma ceylanicum and Heligmosomoides polygyrus were purchased fromDr. D. I. Pritchard, Department of Life Science, University ofNottingham, Nottingham, UK. Ancylostoma duodenale was purchased from Dr.G. A. Schad, The School of Veterinary Medicine, Department ofPathobiology, University of Pennsylvania, Philadelphia, Pa., USA.

In each case, the cDNAs were directionally cloned as EcoRI-NotIfragments in lambda gt11. Approximately 2×10⁵ cDNA clones from eachlibrary (duplicate plaque-lift filters were prepared using Hybond™-N;Amersham) were screened with the radiolabeled AcaNAP5 and AcaNAP6fragments using the following prehybridization and hybridizationconditions: 5×SSC (SSC: 150 mM NaCl, 15 mM trisodium citrate),5×Denhardt's solution, 0.5% SDS, 20% formamide, 100 micrograms/mlsonicated fish sperm DNA (Boehringer), overnight at 42° C. The filterswere washed 4 times for 30 minutes in 2×SSC, 0.1% SDS at 37° C. Afterexposure (about 60 hours) to X-ray film, a total of between 100 and 200hybridization spots were identified in the case of Ace and Adu. A smallnumber of very faint spots were visible in the case of the Hpo cDNAlibrary. For each of the libraries, eight positives were subjected to asecond hybridization round at lower plaque-density so as to isolatesingle plaques.

The retained clones were further characterized by PCR amplification ofthe cDNA-inserts using the oligo(dT)-NotI primer (Promega; this is thesame primer used to prepare first strand cDNA; see Example 2) [SEQ. ID.NO. 95] in combination with the lambda-gt11 primer #1218 having thesequence, GGTGGCGACG ACTCCTGGAG CCCG [SEQ. ID. NO. 96] (New EnglandBiolabs; primer #1218 targets lambda sequences located upstream of thesite of cDNA insertion). PCR amplifications were performed as follows:Taq polymerase from Boehringer; 30 temperature cycles: 1 minute at 95°C.; 1 minute at 50° C.; 1.5 minutes at 72° C. Gel-electrophoreticanalysis of the PCR products clearly demonstrated that cDNAs of roughlythe same size as the AcaNAP5 cDNA (e.g., 400 to 500 bp) were obtainedfor each species. In addition to these AcaNAP5-sized cDNAs, some Ace andAdu cDNAs were estimated to be about 700 bp long.

A number of clones, containing either a 500 bp or an 800 bp insert, werechosen for sequence determination. To that end the cDNA inserts weresubcloned, as SfiI-NotI fragments, into pGEM-type phagemids (Promega;refer to Example 2 for details) which permit the preparation of singlestranded DNA. The sequencing results led to the identification of sixdifferent new NAP-like proteins, designated as follows: AceNAP4,AceNAP5, AceNAP7, AduNAP4, AduNAP7, and HpoNAP5. The nucleotidesequences of the cDNAs as well as the deduced amino acid sequences ofthe encoded proteins are shown in FIG. 7A (AceNAP4 [SEQ. ID. NO. 9]),FIG. 7B (AceNAP5) [SEQ. ID. NO. 10], FIG. 7C (AceNAP7) [SEQ. ID. NO.11], FIG. 7D (AduNAP4) [SEQ. ID. NO. 12], FIG. 7E (AduNAP7) [SEQ. ID.NO. 13], and FIG. 7F (HpoNAP5) [SEQ. ID. NO. 14]. The AceNAP4 [SEQ. ID.NO. 9] and AduNAP7 [SEQ. ID. NO. 13] cDNAs, each about 700 bp long, eachencoded proteins which incorporated two NAP domains; the other cDNAsisolated coded for a protein having a single NAP domain. The AduNAP4cDNA clone [SEQ. ID. NO. 12] was not full-length, i.e., the clone lackedthe 5'-terminal part of the coding region; the correct reading framecould, however, be assigned based on amino acid sequence homology withthe NAP family of related molecules.

The identified cDNA sequences can be used to produce the encodedproteins as disclosed in Examples 3, 4, 5, and 7 using the same oralternative suitable expression systems. Conditioned media or celllysates, depending on the system used, can be tested as such or afterfractionation (using such methodology as outlined in Example 3, 4, 6 and8) for protease inhibitory and anticoagulant activity. Proteins that areencoded by cDNAs which hybridize to probes derived from fragments of theAcaNAP5 gene (FIG. 1) [SEQ. ID. NO. 3] and/or the AcaNAP6 gene (FIG. 3)[SEQ. ID. NO. 5] and that possess serine protease inhibitory and/oranticoagulant properties are considered to belong to the NAP family ofrelated molecules.

Example 10 Identification of NAP by Functional Display of cDNA EncodedProteins

(A) The pDONG Series of Vectors

The nucleotide sequences of the pDONG vectors, pDONG61 [SEQ. ID. NO.15], pDONG62 [SEQ. ID. NO. 16] and pDONG63 [SEQ. ID. NO. 17],derivatives of pUC119 [Vieira, J. and Messing, J., Methods inEnzymology, 153:3-11 (1987)], are depicted in FIGS. 8A to 8Crespectively.

To construct these three vectors, HindIII and SfiI restriction siteswere added at the 5'-end and 3'-end of the filamentous phage gene 6 byPCR amplification of the M13K07 single stranded DNA [Vieira, J. andMessing, J., Ibid] with the G6BACKHIND backward primer and G6FORSFI61,G6FORSFI62 or G6FORSFI63 as forward primers. In a second PCR, the threeobtained fragments were re-amplified with G6BACKHIND and G6FORNOTBAMH asforward primer to append NotI and BamHI sites at the 3'-end of thefragments. The sequences of the above mentioned PCR-primers are asfollows (restriction sites are underlined):

G6BACKHIND: ATCCGAAGCT TTGCTAACAT ACTGCGTAAT AAG [SEQ. ID. NO. 111]

G6FORSFI61: TATGGGATGG CCGACTTGGC CTCCGCCTGA GCCTCCACCT TTATCCCAATCCAAATAAGA [SEQ. ID. NO. 112]

G6FORSFI62: ATGGGATGGC CGACTTGGCC CTCCGCCTGA GCCTCCACCT TTATCCCAATCCAAATAAGA [SEQ. ID. NO. 113]

G6FORSFI63: TATGGGATGG CCGACTTGGC CGATCCGCCT GAGCCTCCAC CTTTATCCCAATCCAAATAA [SEQ. ID. NO. 114]

GAG6FORNOTBAMH: AGGAGGGGAT CCGCGGCCGC GTGATATGGG ATGGCCGACT TGGCC [SEQ.ID. NO. 115]

Finally, the PCR products were gel-purified, individually digested withHindIII and BamHI and inserted between the corresponding sites ofpUC119. Sequence determination confirmed that pDONG61, pDONG62, andpDONG63 all contained the intended insert.

The pDONG series of vectors permit the cloning of cDNAs, as SfiI-NotIfragments. This cloning fuses the cDNAs in each of the three reading(translation) frames to the 3'-end of filamentous phage gene 6 whichencodes one of the phage's coat proteins. Infection of a male-specificE. coli strain harboring a pDONG-derivative, with VCSM13 helper phage(Stratagene, La Jolla, Calif.), results in the rescuing ofpseudo-virions which encapsidate one specific single strand of thepDONG-derivative and which may also incorporate a recombinant protein 6(p6) fusion protein in their coat. cDNAs which are such that the encodedprotein is functionally displayed on the phage surface as a recombinantp6 fusion protein become identifiable by means of a panning experimentdescribed below.

(B) Transfer of the Ancylostoma caninum cDNA Library from Lambda qt11 tothe pDONG Series of Vectors

A phage lambda preparation of the pooled A. caninum cDNA clones (about1×10⁶ plaques, see Example 2) was used to PCR-rescue the cDNA inserts(Taq polymerase from Life Technologies, Gaithersburg, Md., USA; 20temperature cycles: 1 minute at 95° C., 1 minute at 50° C., and 3minutes at 72° C. followed by 10 minutes at 65° C.), with the lambdagt11 primer #1218 having the sequence, GGTGGCGACG ACTCCTGGAG CCCG [SEQ.ID. NO. 96] (New England Biolabs, Beverly, Mass., USA; targetingsequences located upstream of the cDNA insert) in combination with theoligo(dT)-NotI primer/adaptor (Promega) used for first strand cDNAsynthesis. Following digestion with the restriction enzymes SfiI andNotI, the whole size-range of amplification products were recovered fromagarose gel.

All fragments were directionally cloned into the pDONG61, pDONG62, andpDONG63 vectors. The recipient vector-fragments were prepared bydigestion of the CsCl purified vectors with SfiI and NotI andpurification with the "Wizard™ PCR Preps DNA Purification System"(Promega Corp, Madison, Wis., USA).

E. coli strain TG1 [Sambrook, J., Fritsch, E. F. and Maniatis, T.,Molecular Cloning, A Laboratory Manual, Second Edition, volumes 1 to 3,Cold Spring Harbor Laboratory Press (1989)] was transformed byelectroporation with the pDONG/cDNA ligation mixtures.Electrotransformed cells were incubated 1 hour at 37° C. in SOC medium[Sambrook, J. et al., Ibid.] and plated on LB-agar containing 0.1%glucose and 100 micrograms/ml carbenicillin (245×245×25 mm plates;Nunc). 2.2×10⁶, 1.6×10⁶, and 1.4×10⁶ carbenicillin resistanttransformants were obtained with pDONG61, pDONG62, and pDONG63,respectively. From each respective library, designated 20L, 21L and 22L,a number of randomly picked transformants were subjected to PCR analysis(Taq polymerase from Life Technologies; 30 cycles of amplification withthe following temperature program: 1 minute at 95° C., 1 minute at 50°C., and 1 to 3 minutes at 72° C.) using two primers that match withsequences flanking the multiple cloning site of pUC119 (primers #1224having the sequence, CGCCAGGGTT TTCCCAGTCA CGAC [SEQ. ID. NO. 116], and#1233 having the sequence, AGCGGATAAC AATTTCACAC AGGA [SEQ. ID. NO.101]; New England Biolabs). The results showed that the vast majority ofthe clones contained a cDNA-insert of variable size.

(C) Factor Xa Based Affinity-Selection of cDNA Clones Encoding a NAPProtein

Phage particles from the 20L, 21L and 22L libraries were rescued asfollows: each library was scraped from the plates and grown at 37° C. in100 ml LB medium supplemented with 1% glucose and 100 micrograms/mlcarbenicillin until the optical absorbance at 600 nm reaches the valueof 0.5. After addition of VCSM13 helper phage (Stratagene) at amultiplicity of infection (moi) of 20, the culture was left to stand for30 minutes at 37° C. and then slowly shaken for another 30 minutes. Thecells were pelleted by centrifugation and resuspended in 250 ml LBmedium supplemented with 100 micrograms/ml carbenicillin and 50micrograms/ml kanamycin. These cultures were allowed to grow overnightat 30° C. under vigorous agitation. The resulting phage particles werepurified by two consecutive precipitations with polyethylene glycol/NaCland resuspended at 1×10¹³ virions per ml in TRIS-buffered saline (0.05 MTris, 0.15 M sodium chloride, pH 7.4) (TBS). Equal amounts of phageparticles from the 20L, 21L and 22L were then mixed together.

Human factor Xa (see Example 1 for preparation) was biotinylated withbiotin-XX-NHS according to manufacturer's instructions (Pierce). Theamidolytic activity of the protease was not affected by thismodification as shown by an enzymatic assay using the chromogenicsubstrate S-2765 (Chromogenix; see Example 1). Streptavidin-coatedmagnetic beads (Dynal; 1 mg per panning round) were washed three timeswith TBS and blocked in TBS supplemented with 2% skim milk (Difco) atambient temperature. After one hour, the magnetic beads were washedtwice with TBS before use.

For the first round of panning, 1×10¹³ phage from the pooled librarieswere incubated for 75 minutes at 4° C. in 200 microliters of TBS buffersupplemented with 250 nM biotinylated factor Xa, 5 mM CaCl₂ and 2% skimmilk. After this time, 1 mg blocked streptavidin-coated magnetic beads,resuspended in 200 microliters of TBS containing 5 mM CaCl₂ and 2% skimmilk, was added to the phage solution and incubated for 1 hour at 4° C.with gentle agitation. With a magnet (Dynal), the magnetic beads werethen rinsed ten times with 500 microliters of TBS containing 0.1%Tween-20. Bound phage were eluted from the magnetic beads by incubatingthem with 500 microliters of 0.1 M glycine-HCl buffer (pH 2.0) for 10minutes. The supernatant was neutralized with 150 mircoliters 1 MTris-HCl buffer (pH 8.0).

For phage propagation, E. coli strain TG1 [Sambrook, J., Fritsch, E. F.and Maniatis, T., Molecular Cloning, A Laboratory Manual, SecondEdition, volumes 1 to 3, Cold Spring Harbor Laboratory Press (1989)] wasgrown at 37° C. in 10 ml LB medium until the optical absorbance at 600nm reached the value of 0.5. The culture was infected with 650microliters of phage eluted from the magnetic beads and brieflyincubated at 37° C. with no shaking. After centrifugation, the infectedcells were resuspended in 2 ml LB medium and plated onto 245×245×25 mmplates filled with LB-agar containing 1% glucose and 100 micrograms/mlcarbenicillin. After overnight incubation at 37° C., the cells werescraped from the plates and resuspended in 40 ml LB medium supplementedwith 1% glucose and 100 micrograms/ml carbenicillin. A cell aliquotcorresponding to 15 optical densities at 600 nm was then used toinoculate 100 ml LB medium containing 1% glucose and 100 micrograms/mlcarbenicillin. Phage rescue for the next panning round was done asoutlined above.

For the second panning round, 6×10¹² phage were incubated during 90minutes with 1 mg blocked streptavidin-coated magnetic beads in 200microliters of TBS containing 2.5 mM Ca²⁺ and 2% skim milk (this stepwas introduced in the procedure to avoid selection ofstreptavidin-binding clones). After removal of the beads, the sameprotocol was followed as for round 1. Rounds 3, 4 and 5 wereaccomplished as round 2, except that the phage input was lowered to2×10¹² phage.

Twenty-four individual carbenicillin resistant clones that were isolatedafter five rounds of panning against biotinylated factor Xa, were thenanalyzed by ELISA. Streptavidin-coated 96-well plates (Pierce) wereblocked for 1 hour with 200 microliters of TBS containing 2% skim milkper well, then were incubated for 1 hour with 100 microliters of 20 nMbiotinylated factor Xa in TBS per well. For each clone, about 10¹⁰ phagediluted in 100 microliters TBS containing 2% skim milk and 0.1% Tween-20were added to the wells. After a 2-hour incubation, the wells wererinsed four times with 200 microliters TBS containing 0.1% Tween-20.Bound phage were visualized by consecutively incubating with a rabbitanti-M13 antiserum (see Example 11), an alkaline phosphatase conjugatedanti-rabbit serum (Sigma), and p-nitrophenylphosphate as substrate(Sigma). Absorbances were taken at 405 nm after 20 minutes. Out of the24 clones, five bound strongly to factor Xa. No significant non-specificbinding was observed with these phage when tested in the same ELISA withomission of biotinylated factor Xa.

Single stranded DNA was then prepared from the five positive clones andthe inserts 3' to the gene 6 were submitted to automated DNA sequencingusing the primer #1224 having the sequence, CGCCAGGGTT TTCCCAGTCA CGAC[SEQ. ID. NO. 116] (New England Biolabs). All five clones were found tocontain the same 470 bp 5'-truncated cDNA fused in frame to gene 6 inpDONG63. The nucleotide sequence of this cDNA as well as the deducedamino acid sequence are depicted in FIG. 9 [SEQ. ID. NO. 19]. The cDNA,designated AcaNAPc2, encodes a protein, designated NAP isoform c2, thatbelongs to the NAP family of related proteins.

Example 11 Preparation of Antiserum Against M13 Phage

Antiserum against M13 phage was prepared in rabbits by subcutaneousinjections of about 10¹³ M13K07 phage in 500 microliters of PBS (0.01 Msodium phosphate, pH 7.4+0.15 M sodium chloride) combined with an equalvolume of adjuvant. The M13KO7 phage were CsCl-purified essentially asdescribed by Glaser-Wuttke, G., Keppner, J., and Rasched, I., Biochim.Biophys. Acta, 985: 239-247 (1989). The initial injection was done withComplete Freunds adjuvant on day 0, followed by subsequent injectionswith Incomplete Freunds adjuvant on days 7, 14 and 35. Antiserum washarvested on day 42.

The IgG fraction of the antiserum was enriched by passage over a ProteinA-Sepharose column using conditions well known in the art.

Example 12 The Use of AcaNAP5 and AcaNAP6 DNA Sequences to IsolateAdditional NAP-Encoding Sequences from A. caninum

The AcaNAP5 and AcaNAP6 cDNA sequences (from Example 2) were used toisolate related molecules from the same parasitic species bycross-hybridization.

The pGEM-9Zf(-) vectors (Promega, Madison, Wis.) containing the AcaNAP5and AcaNAP6 cDNAs were used to PCR-rescue the regions encoding themature NAP proteins (Taq polymerase from Life Technologies(Gaithersburg, Md.); 20 temperature cycles: 1 minute at 95° C., 1 minuteat 50° C., and 1.5 minutes at 72° C.). The oligonucleotide primers usedwere: (1) YG109, targeting the C-terminal-encoding sequences of cDNAencoding AcaNAP5 and AcaNAP6, and having the sequence,TCAGACATGT-ATAATCTCAT-GTTGG [SEQ. ID. NO. 88], and (2) YG103, targetingthe N-terminal-encoding sequences of mature AcaNAP5 and AcaNAP6, havingthe sequence, AAGGCATACC-CGGAGTGTGG-TG [SEQ. ID. NO. 89]. The YG109primer contains a single nucleotide mismatch when used with AcaNAP6 astarget (underlined T-residue; compare with the sequence shown in FIG. 3[SEQ. ID. NO. 5]). This mismatch did not markedly influence theamplification efficiency. The correctly sized PCR products (about 230basepairs) for AcaNAP5 and AcaNAP6 were both isolated from a 1.5%agarose gel. An equimolar mixture was radiolabeled by random primerextension (T7 QuickPrime kit; Pharmacia (Sweden) and subsequently passedover a Bio-Spin 30 column (Bio-Rad, Richmond, Calif., USA).

Approximately 750,000 Ancylostoma caninum (Aca)cDNA clones (refer toExample 2 (B); duplicate plaque-lift filters were prepared usingHybond™-N; Amersham (Buckinghamshire, England) were screened with theradiolabeled AcaNAP5 and AcaNAP6 cDNA fragments using the followingprehybridization and hybridization conditions: 5×SSC (SSC: 150 mm NaCl,15 mM trisodium citrate), 5×Denhardt's solution, 0.5% SDS, 20%formamide, 100 micrograms/ml sonicated fish sperm DNA (Boehringer),overnight at 42° C. The filters were washed 4 times for 30 minutes in2×SSC, 0.1% SDS at 37° C. After exposure to X-ray film, a total of about300 positives were identified.

48 of the 300 positives were subjected to PCR-amplification (Taqpolymerase from Boehringer Mannheim, Germany; 30 temperature cycles: 1minute at 95° C.; 1 minute at 50° C.; 1.5 minutes at 72° C.) using theabove mentioned YG109 primer, specific for the C-terminus-encodingsequence of AcaNAP5 and AcaNAP6 cDNAs, and primer #1218 which targetslambda-gt11 sequences located upstream of the site of cDNA insertion(New England Biolabs, Beverly, Mass.; GGTGGCGACG ACTCCTGGAG CCCG [SEQ.ID. NO. 96]). 31 out of the 48 positives yielded a PCR product of a sizesimilar to that expected for a AcaNAP5/6-type cDNA.

The remaining 17 positives were used as template for amplification withprimer #1218 and an AcaNAPc2 specific primer (e.g., LJ189, targeting theAcaNAPc2 C-terminus and having the sequence GTTTCGAGTT CCGGGATATATAAAGTCC [SEQ. ID. NO. 117]; refer to Example 10 and FIG. 9). None ofthe clones yielded a PCR product. All 17 positives were then subjectedto a second hybridization round at lower plaque-density; single isolatedclones were identified in all cases. The 17 isolated cDNA clones werere-analyzed by PCR using the primer couples #1218/YG109 and #1218/LJ189.Three out of the 17 clones yielded an amplification product with the#1218/YG109 primers.

The remaining 14 clones were further analyzed by PCR amplification withthe primers #1218 and oligo(dT)-Not (Promega, Madison, Wis.; this is thesame primer used to prepare first strand cDNA; see Example 2). All 14clones yielded a PCR product. Gel-electrophoretic analysis of the PCRproducts indicated that some cDNAs were considerably longer than theAcaNAP5 cDNA insert.

Ten clones, including those having the largest cDNA inserts, were chosenfor sequence determination. To that end the cDNA inserts were subclonedas SfiI-NotI fragments onto pGEM-type phagemids (Promega, Madison,Wis.), as described in Example 2. The sequencing identified eightadditional NAP protein sequences, designated as follows: AcaNAP23,AcaNAP24, AcaNAP25, AcaNAP31, AcaNAP44, AcaNAP45, AcaNAP47, andAcaNAP48. Two additional cDNA clones, designated AcaNAP42 and AcaNAP46,encoded proteins identical to those encoded by AcaNAP31 [SEQ. ID. NO.34]. The nucleotide sequences of the cDNAs as well as the deduced aminoacid sequences of the encoded proteins are shown in FIG. 13A (AcaNAP23[SEQ. ID. NO. 31]), FIG. 13B (AcaNAP24 [SEQ. ID. NO. 32]), FIG. 13C(AcaNAP25 [SEQ. ID. NO. 33]), FIG. 13D (AcaNAP31 [SEQ. ID. NO. 34]),FIG. 13E (AcaNAP44 [SEQ. ID. NO. 35]), FIG. 13F (AcaNAP45 [SEQ. ID. NO.36]), FIG. 13G (AcaNAP47 [SEQ. ID. NO. 37]), and FIG. 13H (AcaNAP48[SEQ. ID. NO. 383). All clones were full-length and included a completesecretion signal. The AcaNAP45 [SEQ. ID. NO. 36] and AcaNAP47 [SEQ. ID.NO. 37] cDNAs, each encode proteins which incorporate two NAP domains;the other cDNAs code for a protein having a single NAP domain.

Example 13 The Use of NAP DNA Sequences to Isolate Sequences Encoding aNAP Protein from Necator americanus

The sequences of AcaNAP5 [SEQ. ID. NO. 3], AcaNAP6 [SEQ. ID. NO: 5],AcaNAPc2 [SEQ. ID. NO. 19], AcaNAP23 [SEQ. ID. NO. 31], AcaNAP24 [SEQ.ID. NO. 32], AcaNAP25 [SEQ. ID. NO. 33], AcaNAP31 [SEQ. ID. NO. 34],AcaNAP44 [SEQ. ID. NO. 35], AcaNAP45 [SEQ. ID. NO. 36], AcaNAP47 [SEQ.ID. NO. 37], AcaNAP48 [SEQ. ID. NO. 38], AceNAP4 [SEQ. ID. NO. 9],AceNAP5 [SEQ. ID. NO. 10], AceNAP7 [SEQ. ID. NO. 11], AduNAP4 [SEQ. ID.NO. 12], AduNAP7 [SEQ.ID. NO. 13], and HpoNAP5 [SEQ. ID. NO. 14] (seeFIGS. 1, 3, 7, and 13) were used to isolate related molecules from thehematophageous parasite Necator americanus by PCR-cloning.

Consensus amino acid sequences were generated from regions of homologyamong the NAP proteins. These consensus sequences were then used todesign the following degenerate PCR primers: NAP-1,5'-AAR-CCN-TGY-GAR-MGG-AAR-TGY-3' [SEQ. ID. NO. 90] corresponding to theamino acid sequence NH₂ -Lys-Pro-Cys-Glu-(Arg/Pro/Lys)-Lys-Cys [SEQ. ID.NO. 118]; NAP-4.RC, 5'-TW-RWA-NCC-NTC-YTT-RCA-NAC-RCA-3' [SEQ. ID. NO.91], corresponding to the sequence NH₂-Cys-(Val/Ile/Gln)-Cys-(Lys/Asp/Glu/Gln)-(Asp/Glu)-Gly-(Phe/Tyr)-Tyr[SEQ. ID. NO. 119]. These primers were used pairwise to generateNAP-specific probes by PCR using N. americanus cDNA as template.

Adult worms, N. americanus, were purchased from Dr.

David Pritchard, University of Nottingham. Poly(A+) RNA was preparedusing the QuickPrep MRNA Purification Kit (Pharmacia, Piscataway, N.J.).One microgram of mRNA was reverse transcribed using AMV reversetranscriptase and random hexamer primers (Amersham, Arlington Hills,Ill.). One fiftieth of the single-stranded cDNA reaction product wasused as template for ˜400 pmole of each of NAP-1 and NAP-4.RC, with PCRGeneAmp (Perkin Elmer, Norwalk, Conn.) reagents, on a Perkin-Elmer DNAthermal cycler. PCR conditions were: cycles 1-3, denaturation at 96° C.for 2 minutes, annealing at 37° C. for 1 minute, and elongation at 72°C. for 3 minutes (ramp time between 37° C. and 72° C. was 2 minutes);cycles 4-5, denaturation at 94° C. for 1 minute, annealing at 37° C. for1 minute, and elongation at 72° C. for 2 minutes (ramp time between 37°C. and 72° C. was 2 minutes); cycles 6-45, denaturation at 94° C. for 1minutes, annealing at 37° C. for 1 minute, and elongation at 72° C. for2 minutes. Elongation times were incremented by 3 seconds/cycle forcycles 6-45.

PCR amplification of N. americanus cDNA with NAP-1 and NAP-4.RC resultedin an approximately 100 bp amplification product. The PCR product waslabeled with [a-32P]-dCTP (Amersham) using random primer labeling(Stratagene, La Jolla, Calif.), and labeled DNA was separated fromunincorporated nucleotides using a Chromaspin-10 column (Clonetech, PaloAlto, Calif.).

A cDNA library was constructed using the following procedure. Doublestranded cDNA was synthesized from 1 μg of N. americanus poly(A+) RNAusing AMV reverse transcriptase and random hexamer primers (Amersham,Arlington Hills, Ill.). cDNA fragments larger than approximately 300 bpwere purified on a 6% polyacrylamide gel and ligated to EcoRI linkers(Stratagene, San Diego, Calif.) using standard procedures. Linkered cDNAwas ligated into EcoRI-cut and dephosphorylated lambda gt10 (Stratagene,San Diego, Calif.) and packaged using a Gigapack Gold II packaging kit(Stratagene, San Diego, Calif.).

Prehybridization and hybridization conditions were 6×SSC (SSC: 150 mMNaCl, 15 mM trisodium citrate, pH 7.0), 0.02 M sodium phosphate pH 6.5,5×Denhardt's solution, 100 μg/ml sheared, denatured salmon sperm DNA,0.23% dextran sulfate. Prehybridization and hybridization were at 42°C., and the filters were washed for 30 minutes at 45° C. with 2×SSCafter two prewashes with 2×SSC for 20 minutes. The filters were exposedovernight to X-ray film with two intensifying screens at -70° C.

Approximately 400,000 recombinant phage of the random primed N.americanus library (unamplified) were screened with the NAP-1/NAP-4.RCPCR fragment. About eleven recombinant phage hybridized to this probe,of which four were isolated for nucleotide sequencing analysis. Doublestranded sequencing was effected by subcloning the EcoRI cDNA fragmentscontained in these phage isolates into pBluescript II KS+ vector(Stratagene, San Diego, Calif.). DNA was sequenced using the Sequenaseversion 2.0 kit (Amersham, Arlington Hills, Ill.)) and M13oligonucleotide primers (Stratagene, San Diego, Calif.).

The four lambda isolates contained DNA that encoded a single 79 aminoacid NAP polypeptide that resembles NAP sequences from Ancylostoma spp.and H. polygyrus. The NAP polypeptide from N. americanus has acalculated molecular weight of 8859.6 Daltons. The nucleotide anddeduced amino acid sequences are shown in FIG. 14.

Example 14 Expression Of Recombinant AceNAP4 In COS Cells

A. Expression

AceNAP4 was transiently produced in COS cells essentially as describedfor Pro-AcaNAP5 in Example 5 and Pro-AcaNAP6 in Example 7.

A pGEM-type phagemid that harbors the AceNAP4 cDNA (from Example 9),served as target for PCR-rescue of the entire AceNAP4 coding region,including the secretion signal, using two XbaI-appending oligonucleotideprimers. The primers used were: (1) SHPCR4, targeting the 5'-end of thegene and having the sequence, GACCAGTCTA GACCACCATG GCGGTGCTTTATTCAGTAGC AATA [SEQ. ID. NO. 120], and (2) SHPCR5, targeting the 3'-endof the gene and having the sequence, GCTCGCTCTA GATTATCGTG AGGTTTCTGGTGCAAAAGTG [SEQ. ID. NO. 121]. The XbaI restriction sites included inthe primers are underlined. The primers were used to amplify the AceNAP4sequence according to the conditions described in Example 5.

Following digestion with XbaI enzyme, the amplification product, havingthe expected size, was isolated from an agarose gel and subsequentlysubstituted for the about 450 basepair XbaI stuffer fragment of thepEF-BOS vector (Mizushima, S. and Nagata, S., Nucl. Acids Res., 18: 5322(1990)]. The protocol described in Example 5 was followed to yield clonepEF-BOS-AceNAP4, which was first shown to harbor the XbaI-insert in thedesired orientation by PCR using primers SHPCR4 and YG60, andsubsequently confirmed by sequence determination. This clone was used totransfect COS cells according to the methods in Example 5.

Twenty-four hours after transfection of the COS cells (refer to Example5, section B) the COS-medium containing 10% FBS was replaced with 50 mlof a medium consisting of a 1:1 mixture of DMEM and Nutrient MixtureHam's F-12 (Life Technologies (Gaithersburg, Md.). The cells were thenfurther incubated at 37° C. and the production of EGR-factor Xadependent TF/factor VIIa inhibitory activity detected as described inExample E.

B. Purification of AceNAP4

1. Anion-exchange chromatography

The COS culture supernatant from the AceNAP4-expressing cells wascentrifuged at 1500 r.p.m.(about 500×g) for 10 minutes before thefollowing protease inhibitors (ICN Biomedicals Inc., Costa Mesa, Calif.)were added (1.0×10⁻⁵ M pepstatinA(isovaleryl-Val-Val-4-amino-3-hydroxy-6-methyl-heptanoyl-Ala-4-amino-3hydroxy-6-methylheptanoicacid), 1.0×10⁻⁵ M AEBSF (4-(2-amonoethyl)benzenesulfonyl fluoride).Solid sodium acetate was added to a final concentration of 50 mM beforethe pH was adjusted with 1 N HCl to pH 5.3. The supernatant wasclarified by passage through a 0.22 micrometer cellulose acetate filter(Corning Inc., Corning, N.Y., USA).

The clarified supernatant (total volume aproximaterly 450 ml) was loadedon a Poros20 HQ (Perseptive Biosystems, MA) 1×2 cm columnpreequilibrated with Anion Buffer (0.05 M sodium acetate 0.1 M NaCl, pH5.3) at a flow rate of 5 ml/minute. The column and the sample were atambient temperature throughout this purification step. The column wassubsequently washed with 10 column volumes of Anion Buffer and 10 columnvolumes of 50 mM sodium acetate, 0.37 M NaCl, pH5.3

Material that had EGR-FXa dependent fVIIa/TF amidolytic inhibitoryactivity (see Example E) was eluted with 50 mM sodium acetate, 1 M NaCl,pH5.3 at a flow of 2 ml/minute.

2. Reverse-phase chromatography

An aliqout of the pool of fractions collected after anion exchangechromatography was loaded onto a 0.46×25 cm C18 column (218TP54 Vydac;Hesperia, Calif.) which was then developed with a linear gradient of10-35% acetonitrile in 0.1% (v/v) trifluoroacetic acid at 1ml/minutewith a rate of 0.4% change in acetonitrile/minute. EGR-FXa dependentTF/FVIIa amidolytic inhibitory activity (see Example E) was monitoredand fractions containing this inhibitory activity were isolated andvacuum-dried.

3. Characterization of recombinant AceNAP4

The AceNAP4 compound demonstrated SDS-PAGE mobility on a 4-20% gel,consistent with its size predicted from the sequence of the cDNA(Coomassie stained gel of material after RP-chromatography).

Example 15 Production and Purification Of Recombinant AcaNAPc2 In P.pastoris

A. Expression Vector Construction

Expression of the AcaNAPc2 gene in P. pastoris was accomplished usingthe protocol detailed in Example 3 for the expression of AcaNAP5 withthe following modifications.

The pDONG63 vector containing the AcaNAPc2 cDNA, described in Example10, was used to isolate by amplification ("PCR-rescue") the regionencoding mature AcaNAPc2 protein (using Vent polymerase from New EnglandBiolabs, Beverly, Mass.; 20 temperature cycles: 1 minute at 94° C., 1minute at 50° C., and 1.5 minutes at 72° C.). The followingoligonucleotide primers were used:

LJ190: AAAGCAACGA-TGCAGTGTGG-TGAG [SEQ. ID. NO. 122]

LJ191: GCTCGCTCTA-GAAGCTTCAG-TTTCGAGTTC-CGGGATATAT-AAAGTCC [SEQ. ID. NO.123]

The LJ191 primer, targeting C-terminal sequences, contained anon-annealing extension which included XbaI and HindIII restrictionsites (underlined).

Following digestion with XbaI enzyme, the amplification product, havingthe expected size, was isolated from gel and subsequently enzymaticallyphosphorylated (T4 polynucleotide kinase from New England Biolabs,Beverly, Mass.). After heat-inactivation (10 minutes at at 70° C.) ofthe kinase, the blunt-ended/XbaI fragment was directionally cloned intothe vector pYAM7SP8 for expression purposes. The recipientvector-fragment from pYAM7SP8 was prepared by StuI-SpeI restriction, andpurified from agarose gel. The E. coli strain, WK6 [Zell, R. and Fritz,H.-J., EMBO J., 6: 1809-1815 (1987]), was transformed with the ligationmixture, and ampicillin resistant clones were selected.

Based on restriction analysis, a plasmid clone containing an insert ofthe expected size, designated pYAM7SP-NAPC2, was retained for furthercharacterization. Sequence determination of the clone pYAM7SP-NAPC2confirmed the precise insertion of the mature AcaNAPc2 coding region infusion with the prepro leader signal, as predicted by the constructionscheme, as well as the absence of unwanted mutations in the codingregion.

B. Expression Of Recombinant AcaNAPc2 In P. pastoris

The Pichia strain GTS115 (his4) has been described in Stroman, D. W. etal., U.S. Pat. No. 4,855,231. All of the P. pastoris manipulations wereperformed essentially as described in Stroman, D. W. et al., U.S. Pat.No. 4,855,231.

About 1 microgram of pYAM7SP-NAPC2 plasmid DNA was electroporated intothe strain GTS115 using a standard electroporation protocol. The plasmidwas previously linearized by SalI digestion, theoretically targeting theintegration event into the his4 chromosomal locus.

The selection of a AcaNAPc2 high-expresser strain was performed asdescribed in Example 3 for NAP isoform 5 (AcaNAPS) using mini-culturescreening. The mini-cultures were tested for the presence of secretedAcaNAPc2 using the fVIIa/TF-EGR-fXa assay (Example E) resulting in theselection of two clones. After a second screening round, using the sameprocedure, but this time at the shake-flask level, one isolated hostcell was chosen and designated P. pastoris GTS115/7SP-NAPc2.

The host cell, GTS115/7SP-NAPc2, was shown to have a wild typemethanol-utilisation phenotype (Mut⁺), which demonstrated that theintegration of the expression cassette into the chromosome of GTS115 didnot alter the functionality of the genomic AOX1 gene.

Subsequent production of recombinant AcaNAPc2 material was performed inshake flask cultures, as described in Stroman, D. W. et al., U.S. Pat.No. 4,855,231. The recombinant product was purified from Pichia pastoriscell supernatant as described below.

C. Purification of recombinant AcaNAPc2

1. Cation Exchange chromatography

The culture supernatant (100 ml) was centrifuged at 16000 rpm (about30,000×g) for 20 minutes before the pH was adjusted with 1 N HCl to pH3. The conductivity of the supernatant was decreased to less than 10mS/cm by adding MilliQ water. The diluted supernatant was clarified bypassage through a 0.22 micrometer cellulose acetate filter (CorningInc., Corning, N.Y., USA).

The total volume (approximately 500 ml) of the supernatant was loadedonto a Poros20HS (Perseptive Biosystems, Mass.) 1×2cm columnpre-equilibrated with Cation Buffer (50 mM sodium citrate pH 3) at aflow-rate of 5 ml/minute. The column and the diluted fermentationsupernatant were at room temperature througout this purification step.The column was subsequently washed with 50 column volumes Cation Bufferand 10 column volumes Cation Buffer containing 0.1 M NaCl. Material thathad inhibitory activity in a prothrombinase assay was eluted with CationBuffer containing 1 M NaCl at a flow rate of 2 ml/min.

2. Molecular Sieve Chromatography using Superdex30

The 1 M NaCl elution pool containing the EGR-fXa-fVIIa/TF inhibitorymaterial (3 ml; see Example C) from the cation-exchange column wasloaded onto a Superdex30 PG (Pharmacia; Sweden) 1.6×60 cm columnpre-equilibrated with 0.1 M sodium phosphate pH7.4, 0.15 M NaCl atambient temperature. The chromatography was conducted at a flow-rate of2 ml/minute. The prothrombinase inhibitory activity (Example C) eluted56-64 ml into the run and was pooled.

3. Reverse Phase Chromatography

One ml of the pooled fractions from the gel filtration chromatographywas loaded onto a 0.46×25 cm C18 column (218TP54 Vydac; Hesperia,Calif.) which was then developed with a linear gradient 10-30%acetonitrile in 0.1% (v/v) trifluoroacetic acid with a rate of 0.5%change in acetonitrile/minute. The major peak which eluted around 20-25%acetonitrile, was manually collected and displayed prothrombinaseinhibitory activity.

4. Molecular Mass Determination

The estimated mass for the main constituent isolated as described insection (1) to (3) of this example was determined using electrosprayionisation mass spectrometry. The estimated mass of the recombinantAcaNAPc2 was 9640 daltons, fully in agreement with the calculatedmolecular mass of this molecule derived from the cDNA sequence.

Example 16 Expression of AcaNAP42 in P. pastoris

The pGEM-9zf(-) vector (Promega) containing the AcaNAP42 cDNA (Example12) was used to isolate the region encoding the mature AcaNAP42 proteinby PCR amplification (using Taq polymerase from Perkin Elmer,Branchburg, N.J.; 25 temperature cycles: 1 minute at 94° C., 1 minute at50° C., and 1 minute at 72° C.). The following oligonucleotide primerswere used:

oligo3: ^(5') GAG ACT TTT AAA TCA CTG TGG GAT CAG AAG^(3') [SEQ. ID. NO.124]

oligo2: ⁵ 'TTC AGG ACT AGT TCA TGG TGC GAA AGT AAT AAA^(3') [SEQ. ID.NO. 125]

The oligo 3 primer, targeting the N-terminal sequence, contained anon-annealing extension which includes DraI restriction site(underlined). The oligo 2 primer, targeting the C-terminal sequence,contained SpeI restriction site.

The NAP amplification product, having the expected approximately 250 bpsize, was digested with DraI and SpeI enzymes, purified by extractionwith phenol: chloroform: iso-amyl alcohol (25:24:1, volume/volume) andprecipitated in ethyl alcohol. The recipient vector-fragment frompYAM7SP8 (Example 3) was prepared by StuI-SpeI restriction, purified byextraction with phenol: chloroform iso-amyl alcohol (25:24:1,volume/volume) and precipitated in ethyl alcohol. The E.coli strain,XL1-Blue [Bullock, W. O., Fernande, J. M., and Short, J. M.Biotechniques 5: 376-379 (1987)], was transformed with the ligationmixture that contained the above DNA fragments, and ampicillin resistantclones were selected.

Based on restriction analysis, a plasmid clone containing an insert ofthe expected size, designated pYAM7SP8-NAP42, was retained for furthercharacterization. Sequence determination of the clone confirmed correctinsertion of the mature coding region in fusion with thePHO1/alpha-factor prepro leader signal, as predicted by the constructionscheme, as well as the absence of unwanted mutations in the codingregion.

About 10 micrograms of pYAM 7SP-NAP 42 plasmid were electroporated intoPichia strain GTS115 (his4), described in Example 3. The plasmid waspreviously digested by NotI enzyme, targeting the integration event atthe AOX1 chromosomal locus.

The His+ transformants were selected as described in Example 3. Singlecolonies (n=90) from the electroporation were grown in wells of a96-well plate containing 100 microliters of glycerol-minimal medium for24 hours on a plate-shaker at room temperature. One liter of theglycerol-minimal medium contained 13.4 g Yeast Nitrogen Base withoutamino acids (DIFCO); 400 micrograms biotin; 10 ml glycerol; and 10 mMpotassium phosphate (pH 6.0).

The cells were pelleted and resuspended in fresh methanol-minimal medium(same composition as above except that the 10 ml glycerol was replacedby 5 ml methanol) to induce the AOX1 promoter. After an additionalincubation period of 24 hours with agitation at room temperature, 10microliters of culture supernatants were tested by the Prothrombin TimeAssay (Example B). The presence of secreted AcaNAP42 was detected by theprolongation of the coagulation time of human plasma.

Example 17 Expression of AcaNAPc2/Proline in P. pastoris

To enhance stability and the expression level of AcaNAPc2, a mutant cDNAwas constructed that encoded an additional proline residue at theC-terminus of the protein (AcaNAPc2/Proline or "AcaNAPc2P"). Theexpression vector, pYAM7SP8-NAPc2/Proline, was made in the same manneras described in Example 16. The oligo 8 primer is the N-terminal primerwith DraI restriction site and the oligo 9 primer is the C-terminalprimer containing XbaI site and the amino acid codon, TGG, to add oneProline residue to the C-terminal of the natural form of AcaNAPc2.

oligo 8: ^(5') GCG TTT AAA GCA ACG ATG CAG TGT GGT G^(3') [SEQ. ID. NO.126]

oligo 9: ^(5') C GCT CTA GAA GCT TCA TGG GTT TCG AGT TCC GGG ATA TAT AAAGTC^(3') [SEQ. ID. NO. 127]

Following digestion of the amplification product (approximately 270 bp)with DraI and XbaI, the amplification product was purified and ligatedwith the vector-fragment from pYAM7SP8 prepared by StuI-SpeIrestriction. A plasmid clone containing the AcaNAPc2/Proline insert wasconfirmed by DNA sequencing and designated pYAM7SP8-NAPc2/Proline.

The vector, pYAX7SP8-NAPc2/Proline, was used to transform strain GTS115(his) as described in Example 16. Transformants were selected and grownaccording to Example 16. The presence of secreted AcaNAPc2/proline inthe growth media was detected by the prolongation of the coagulationtime of human plasma (see Example B).

Example 18

Alternative Methods of Purifying AcaNAP5, AcaNAPc2 and AcaNAPc2P

(A) AcaNAp5

An alternative method of purifying AcaNAP5 from fermentation media is asfollows. Cells were removed from a fermentation of a Pichia pastorisstrain expressing AcaNAP5, and the media was frozen. The purificationprotocol was initiated by thawing frozen media overnight at 4° C., thendiluting it with approximately four parts Milli Q water to lower theconductivity below 8 mS. The pH was adjusted to 3.5, and the media wasfiltered using a 0.22 μm cellulose acetate filter (Corning Inc.,Corning, N.Y.).

The activity of the NAP-containing material was determined in theprothrombin time clotting assay at the beginning of the purificationprocedure and at each step in the procedure using the protocol inExample B.

The filtered media was applied to a Pharmacia SP-Fast Flow column, at aflow rate of 60 ml/min at ambient temperature, and the column was washedwith 10 column volumes of 50 mM citrate/phosphate, pH 3.5. Step elutionwas performed with 100 mM NaCl, 250 mM NaCl, and then 1000 mM NaCl, allin 50 mM citrate/phosphate, pH 3.5. PT activity was detected in the 250mM NaCl eluate. The total eluate was dialyzed until the conductivity wasbelow 8 mS.

The pH of the material was adjusted to 4.5 with acetic acid, and thenapplied to a sulfoethyl aspartamide column at ambient temperature.Approximately 10 column volumes of 50 mM ammonium acetate, pH 4.5/40%acetonitrile, were used to wash the column. The column was eluted with50 mM ammonium acetate, pH 4.5/40% acetonitrile/200 mM NaCl, and theeluate was dialyzed or diafiltered as before.

The eluate was adjusted to 0.1% TFA, applied to a Vydac C18protein/peptide reverse phase column at ambient temperature, and elutedusing 0.1% TFA/19% acetonitrile, followed by 0.1% TFA/25% acetonitrile,at a flow rate of 7 ml/min. NAP was detected in and recovered from the0.1% TFA/25% acetonitrile elution.

(B) AcaNAPc2 and AcaNAPc2P

AcaNAPc2 or AcaNAPc2P can be purified as described above with thefollowing protocol modifications. After thawing and diluting the mediato achieve a conductivity below 8 mS, the pH of the AcaNAPc2-containingmedia was adjusted to pH 5.0 using NaOH. The filtered media was appliedto a. Pharmacia Q Fast Flow column, at a flow rate of 60 ml/min atambient temperature, and the column was washed with 10 column volumes of50 mM acetic acid, pH 5.0. Step elution was performed with 100 mM NaCl,250 mm NaCl, and then 1000 mM NaCl, all in 50 mm acetic acid, pH 5.0. PTactivity was detected in the 250 mM NaCl eluate. The total eluate wasdialyzed until the conductivity was below 8 mS, and the protocoloutlined above was followed using sulfoethyl aspartamide and RP-HPLCchromatography.

Example A Factor Xa Amidolytic Assay

The ability of NAPs of the present invention to act as inhibitors offactor Xa catalytic activity was assessed by determining the NAP-inducedinhibition of amidolytic activity catalyzed by the human enzyme, asrepresented by Ki* values.

The buffer used for all assays was HBSA (10 mM HEPES, pH 7.5, 150 mMsodium chloride, 0.1% bovine serum albumin). All reagents were fromSigma Chemical Co. (St. Louis, Mo.), unless otherwise indicated.

The assay was conducted by combining in appropriate wells of a Corningmicrotiter plate, 50 microliters of HBSA, 50 microliters of the test NAPcompound diluted (0.025-25 nM) in HBSA (or HBSA alone for uninhibitedvelocity measurement), and 50 microliters of the Factor Xa enzymediluted in HBSA (prepared from purified human factor X obtained fromEnzyme Research Laboratories (South Bend, Ind.) according to the methoddescribed by Bock, P. E. et al., Archives of Biochem. Biophys. 273: 375(1989). The enzyme was diluted into HBSA prior to the assay in which thefinal concentration was 0.5 nM). Following a 30 minute incubation atambient temperature, 50 microliters of the substrate S2765(N-alpha-benzyloxycarbonyl-D-argininyl-L-glycyl-L-arginine-p-nitroanilidedihydrochloride,obtained from Kabi Diagnostica (or Kabi Pharmacia HeparInc., Franklin, Ohio) and made up in deionized water followed bydilution in HBSA prior to the assay) were added to the wells yielding afinal total volume of 200 microliters and a final concentration of 250micromolar (about 5-times Km). The initial velocity of chromogenicsubstrate hydrolysis was measured by the change in absorbance at 405 nmusing a Thermo Max® Kinetic Microplate Reader (Molecular Devices, PaloAlto, Calif.) over a 5 minute period in which less than 5% of the addedsubstrate was utilized.

Ratios of inhibited pre-equilibrium, steady-state velocities containingNAP (Vi) to the uninhibited velocity of free fXa alone (V_(o)) wereplotted against the corresponding concentrations of NAP. These data werethen directly fit to an equation for tight-binding inhibitors [Morrison,J. F., and Walsh, C. T., Adv. Enzymol. 61:201-300 (1988)], from whichthe apparent equilibrium dissociation inhibitory constant K_(i) * wascalculated.

Table 1 below gives the Ki* values for the test compounds AcaNAP5 [SEQ.ID. NO. 4], AcaNAP6 [SEQ. ID. NO. 6], and AcaNAPc2 [SEQ, ID. NO. 59],prepared as described in Examples 3, 4, and 15, respectively. The datashow the utility of AcaNAP5 and AcaNAP6 as potent in vitro inhibitors ofhuman FXa. In contrast, AcaNAPc2 did not effectively inhibit FXaamidolytic activity indicating that it does not affect the catalyticactivity of free fXa.

                  TABLE 1                                                         ______________________________________                                               Compound      Ki* (pM)                                                 ______________________________________                                               AcaNAP5       43 ± 5                                                       AcaNAP6       996 ± 65                                                     AcaNAPc2      NI.sup.a                                                 ______________________________________                                         .sup.a NI = no inhibition; a maximum of 15% inhibition was observed up to     1 μM.                                                                 

Example B Prothrombin Time (PT) and Activated Partial ThromboplastinTime (aPTT) Assays

The ex vivo anticoagulant effects of NAPs of the present invention inhuman plasma were evaluated by measuring the prolongation of theactivated partial thromboplastin time (aPTT) and prothrombin time (PT)over a broad concentration range of each inhibitor.

Fresh frozen pooled normal citrated human plasma was obtained fromGeorge King Biomedical, Overland Park, Kans. Respective measurements ofaPTT and PT were made using the Coag-A-Mate RA4 automated coagulometer(General Diagnostics, Organon Technica, Oklahoma City, Okla.) using theAutomated aPTT Platelin® L reagent (Organon Technica, Durham, N.C.) andSimplastin® Excel (Organon Technica, Durham, N.C.) respectively, asinitiators of clotting according to the manufacturer's instructions.

The assays were conducted by making a series of dilutions of each testedNAP in rapidly thawed plasma followed by adding 200 microliters or 100microliters of the above referenced reagents to the wells of the assaycarousel for the aPTT or PT measurements, respectively. Alternatively,the NAPs were serially diluted into HBSA and 10 μl of each dilution wereadded to 100 μl of normal human plasma in the wells of the Coag-A-Mateassay carousel, followed by addition of reagent.

Concentrations of NAP were plotted against clotting time, and a doublingtime concentration was calculated, i.e., a specified concentration ofNAP that doubled the control clotting time of either the PT or the aPTT.The control clotting times (absence of NAP) in the PT and APTT were 12.1seconds and 28.5 seconds, respectively.

Table 2 below shows the ex vivo anticoagulant effects of AcaNAP5 [SEQ.ID. NO. 4], AcaNAP6 [SEQ. ID. NO. 6], AcaNAPc2 [SEQ. ID. NO. 59], andAceNAP4 [SEQ. ID. NO. 62] and Pro-AcaNAP5 [SEQ. ID. NO. 7] representedby the concentration of each that doubled (doubling concentration) thecontrol clotting time of normal human plasma in the respective PT andAPTT clotting assays relative to a control assay where no such NAP waspresent. The data show the utility of these compounds as potentanticoagulants of clotting human plasma. The data also demonstrate theequivalency of native NAP and recombinant NAP. ##STR2##

FIGS. 10A and 10B also show NAP-induced prolongation of the PT (FIG.10A) and aPTT (FIG. 10B) in a dose-dependent manner.

Example C Prothrombinase Inhibition Assay

The ability of NAP of the present invention to act as an inhibitor ofthe activation of prothrombin by Factor Xa that has been assembled intoa physiologic prothrombinase complex was assessed by determining therespective inhibition constant, Ki*.

Prothrombinase activity was measured using a coupled amidolytic assay,where a preformed complex of human FXa, human Factor Va (FVa), andphospholipid vesicles first activates human prothrombin to thrombin. Theamidolytic activity of the generated thrombin is measured simultaneouslyusing a chromogenic substrate. Purified human FVa was obtained fromHaematologic Technologies, Inc. (Essex Junction, Vt.). Purified humanprothrombin was purchased from Celsus Laboratories, Inc. (Cincinnati,Ohio). The chromogenic substrate Pefachrome t-PA (CH₃ SO₂-D-hexahydrotyrosine-glycyl-L-arginine-p-nitroanilide) from PentapharmLtd (Basel, Switzerland) was purchased from Centerchem, Inc. (Tarrytown,N.Y.). The substrate was reconstituted in deionized water prior to use.Phospholipid vesicles were made, consisting of phosphotidyl choline(67%, w/v), phosphatidyl glycerol (16%, w/v), phosphatidyl ethanolamine(10%, w/v), and phosphatidyl serine (7%, w/v) in the presence ofdetergent, as described by Ruf et al. (Ruf, W., Miles, D. J.,Rehemtulla, A., and Edgington, T. S. Methods in Enzymology 222: 209-224(1993)). The phospholipids were purchased from Avanti Polar Lipids,(Alabaster, Ala.).

The prothrombinase complex was formed in a polypropylene test tube bycombining FVa, FXa, and phospholipid vesicles (PLV) in HBSA containing 3mM CaCl₂ for 10 min. In appropriate wells of a microtiter plate, 50 μlof the complex were combined with 50 μl of NAP diluted in HBSA, or HBSAalone (for V_(o) (uninhibited velocity) measurement). Following anincubation of 30 min at room temperature, the triplicate reactions wereinitiated by the addition of a substrate solution, containing humanprothrombin and the chromogenic substrate for thrombin, Pefachrome tPA.The final concentration of reactants in a total volume of 150 μL of HBSAwas: NAP (0.025-25 nM), FXa (250 fM), PLV (5 μM), prothrombin (250 nM),Pefachrome tPA (250 μM, 5× Km), and CaCl₂ (3 mM).

The prothrombinase activity of fXa was measured as an increase in theabsorbance at 405 nm over 10 min (velocity), exactly as described inExample A, under steady-state conditions. The absorbance increase wassigmoidal over time, reflecting the coupled reactions of the activationof prothrombin by the FXa-containing prothrombinase complex, and thesubsequent hydrolysis of Pefachrome tPA by the generated thrombin. Thedata from each well of a triplicate were combined and fit byreiterative, linear least squares regression analysis, as a function ofabsorbance versus time², as described [Carson, S. D. Comput. Prog.Biomed. 19: 151-157 (1985)] to determine the initial velocity (V_(i)) ofprothrombin activation. Ratios of inhibited steady-state initialvelocities containing NAP (Vi) to the uninhibited velocity ofprothrombinase fXa alone (V_(o)) were plotted against the correspondingconcentrations of NAP. These data were directly fit to the equation fortight-binding inhibitors, as in Example A above, and the apparentequilibrium dissociation inhibitory constant K_(i) * was calculated.

Table 3 below gives the dissociation inhibitor constant (Ki*) ofrecombinant AcaNAP5 [SEQ. ID. NO. 4], AcaNAP6 [SEQ. ID. NO. 6] andAcaNAPc2 [SEQ. ID. NO. 59] (all made in Pichia pastoris as described)against the activation of prothrombin by human fXa incorporated into aprothrombinase complex. These data show the utility of these compoundsas inhibitors of human FXa incorporated into the prothrombinase complex.##STR3##

The data presented in Examples A, B, and C suggest that AcaNAP5 andAcaNAP6 may be interacting with FXa in a similar manner that involvesdirectly restricting access of both the peptidyl and macromolecularsubstrate (prothrombin) to the catalytic center of the enzyme. Incontrast, AcaNAPc2 appears to be interacting with FXa in a way that onlyperturbs the macromolecular interactions of this enzyme with either thesubstrate and/or cofactor (Factor Va), while not directly inhibiting thecatalytic turnover of the peptidyl substrate (see Table 1).

Example D In vitro Enzyme Assays for Activity Specificity Determination

The ability of NAP of the present invention to act as a selectiveinhibitor of FXa catalytic activity or TF/VIIa activity was assessed bydetermining whether the test NAP would inhibit other enzymes in an assayat a concentration that was 100-fold higher than the concentration ofthe following related serine proteases: thrombin, Factor Xa, Factor XIa,Factor XIIa, kallikrein, activated protein C, plasmin, recombinanttissue plasminogen activator (rt-PA), urokinase, chymotrypsin, andtrypsin. These assays also are used to determine the specificity of NAPshaving serine protease inhibitory activity.

(1) General protocol for enzyme inhibition assays

The buffer used for all assays was HBSA (Example A). All substrates werereconstituted in deionized water, followed by dilution into HBSA priorto the assay. The amidolytic assay for determining the specificity ofinhibition of serine proteases was conducted by combining in appropriatewells of a Corning microtiter plate, 50 μl of HBSA, 50 μl of NAP at aspecified concentration diluted in HBSA, or HBSA alone (uninhibitedcontrol velocity, Vo), and 50 μl of a specified enzyme (see specificenzymes below). Following a 30 minute incubation at ambient temperature,50 μl of substrate were added to triplicate wells. The finalconcentration of reactants in a total volume of 200 μl of HBSA was: NAP(75 nM), enzyme (750 pM), and chromogenic substrate (as indicatedbelow). The initial velocity of chromogenic substrate hydrolysis wasmeasured as a change in absorbance at 405 nm over a 5 minute period, inwhich less than 5% of the added substrate was hydrolyzed. The velocitiesof test samples, containing NAP (Vi) were then expressed as a percent ofthe uninhibited control velocity (Vo) by the following formula:Vi/Vo×100, for each of the enzymes.

(2) Specific enzyme assays

(a) Thrombin Assay

Thrombin catalytic activity was determined using the chromogenicsubstrate Pefachrome t-PA (CH₃ SO₂-D-hexahydrotyrosine-glycyl-L-arginine-p-nitroaniline, obtained fromPentapharm Ltd., Basel, Switzerland). The final concentration ofPefachrome t-PA was 250 μM (about 5-times Km). Purified humanalpha-thrombin was obtained from Enzyme Research Laboratories,Inc.(South Bend, Ind.).

(b) Factor Xa Assay

Factor Xa catalytic activity was determined using the chromogenicsubstrate S-2765(N-benzyloxycarbonyl-D-arginine-L-glycine-L-arginine-p-nitroaniline),obtained from Kabi Pharmacia Hepar, Inc. (Franklin, Ohio). Allsubstrates were reconstituted in deionized water prior to use. The finalconcentration of S-2765 was 250 μM (about 5-times Km). Purified humanFactor X was obtained from Enzyme Research Laboratories, Inc. (SouthBend, Ind.) and Factor Xa (FXa) was activated and prepared from Factor Xas described [Bock, P. E., Craig, P. A., Olson, S. T., and Singh, P.Arch. Biochem. Biophys. 273:375-388 (1989)].

(c) Factor XIa Assay

Factor FXIa catalytic activity was determined using the chromogenicsubstrate S-2366 (L-Pyroglutamyl-L-prolyl-L-arginine-p-nitroaniline,obtained from Kabi Pharmacia Hepar, Franklin, Ohio). The finalconcentration of S-2366 was 750 μM. Purified human FXIa was obtainedfrom Enzyme Research Laboratories, Inc. (South Bend, Ind.).

(d) Factor XIIa Assay

Factor FXIIa catalytic activity was determined using the chromogenicsubstrate Spectrozyme FXIIa(H-D-CHT-L-glycyl-L-arginine-p-nitroaniline), obtained from AmericanDiagnostica, Greenwich, Conn.). The final concentration of SpectrozymeFXIIa was 100 μM. Purified human FXIIa was obtained from Enzyme ResearchLaboratories, Inc. (South Bend, Ind.).

(e) Kallikrein Assay

Kallikrein catalytic activity was determined using the chromogenicsubstrate S-2302 (H-D-prolyl-L-phenylalanyl-L-arginine-p-nitroaniline,obtained from Kabi Pharmacia Hepar, Franklin, Ohio). The finalconcentration of S-2302 was 400 μM. Purified human kallikrein wasobtained from Enzyme Research Laboratories, Inc. (South Bend, Ind.).

(f) Activated Protein C (aPC)

Activated Protein C catalytic activity was determined using thechromogenic substrate Spectrozyme PCa(H-D-lysyl(-Cbo)-L-prolyl-L-arginine-p-nitroaniline) obtained fromAmerican Diagnostica Inc. (Greenwich, Conn.). The final concentrationwas 400 μM (about 4 times Km). Purified human aPC was obtained fromHematologic Technologies, Inc.(Essex Junction, Vt.)

(g) Plasmin Assay

Plasmin catalytic activity was determined using the chromogenicsubstrate S-2366 (L-Pyroglutamyl-L-prolyl-L-arginine-p-nitroaniline,obtained from Kabi Pharmacia Hepar, Franklin, Ohio). The finalconcentration of S-2366 was 300 μM (about 4 times Km). Purified humanplasmin was obtained from Enzyme Research Laboratories, Inc. (SouthBend, Ind.).

(h) Recombinant tissue plasminogen activator (rt-PA)

rt-PA catalytic activity was determined using the substrate, Pefachromet-PA (CH₃ SO₂ -D-hexahydrotyrosine-glycyl-L-arginine-p-nitroaniline,obtained from Pentapharm Ltd., Basel, Switzerland). The finalconcentration was 500 μM (about 3 times Km). Human rt-PA (Activase®) wasobtained from Genentech, Inc. (So. San Fransisco, Calif.).

(i) Urokinase

Urokinase catalytic activity was determined using the substrate S-2444(L-Pyroglutamyl-L-glycyl-L-arginine-p-nitroaniline, obtained from KabiPharmacia Hepar, Franklin, Ohio). The final concentration of S-2444 was150 μM (about 7 times Km). Human urokinase (Abbokinase®), purified fromcultured human kidney cells, was obtained from Abbott Laboratories(North Chicago, Ill.).

(j) Chymotrypsin

Chymotrypsin catalytic activity was determined using the chromogenicsubstrate, S-2586(Methoxy-succinyl-L-argininyl-L-prolyl-L-tyrosine-p-nitroaniline, whichwas obtained from Kabi Pharmacia Hepar,Franklin, Ohio). The finalconcentration of S-2586 was 100 μM (about 8 times Km). Purified(3×-crystallized;CDI) bovine pancreatic-chymotrypsin was obtained fromWorthington Biochemical Corp. (Freehold, N.J.).

(k) Trypsin

Trypsin catalytic activity was determined using the chromogenicsubstrate S-2222 (N-benzoyl-L-isoleucyl-L-glutamyl [-methylester]-L-arginine-p-nitroaniline, which was obtained from Kabi PharmaciaHepar, Franklin, Ohio). The final concentration of S-2222 was 300 μM(about 5 times Km). Purified human pancreatic trypsin was obtained fromScripps Laboratories (San Diego, Calif.).

Table 4 lists the inhibition of the amidolytic acativity of FXa and 10additional serine proteases by either recombinant AcaNAP-5 [SEQ. ID. NO.4] or recombinant AcaNAP-6 [SEQ. ID. NO. 6] (both expressed in Pichiapastoris, as described), expressed as percent of control velocity. TheseNAPs demonstrate a high degree of specificity for the inhibition of FXacompared to the other, related serine proteases.

                  TABLE 4                                                         ______________________________________                                                       % Control    % Control                                                        Velocity     Velocity                                          Enzyme         +AcaNAP5     +AcaNAP6                                          ______________________________________                                        FXa            1 ± 1     14 ± 1                                         FIIa           104 ± 5   98 ± 3                                         FXIa           34 ± 12   98 ± 3                                         FXIIa          103 ± 6   100 ± 4                                        kallikrein     102 ± 4   101 ± 3                                        aPC            95 ± 2    98 ± 1                                         plasmin        111 ± 6   113 ± 12                                       r-tPA          96 ± 9    96 ± 7                                         urokinase      101 ± 14  96 ± 2                                         chymotrypsin   105 ± 0   100 ± 11                                       trypsin        98 ± 6    93 ± 4                                         ______________________________________                                    

Table 5 lists the inhibitory effect of recombinant AcaNAPc2 [SEQ. ID.NO. 59] and recombinant AceNAP4 [SEQ. ID. NO. 62] (both expressed inPichia pastoris, as described) on the amidolytic activity of 11 selectedserine proteases. Inhibition is expressed as percent of controlvelocity. These data demonstrate that these NAPs possess a high degreeof specificity for the serine proteases in Table 5.

                  TABLE 5                                                         ______________________________________                                                       % Control    % Control                                                        Velocity     Velocity                                          Enzyme         +AcaNAPc2    +AceNAP4                                          ______________________________________                                        FXa            84 ± 3    76 ± 3                                         FIIa           99 ± 3    93 ± 3                                         FXIa           103 ± 4   96 ± 1                                         FXIIa          97 ± 1    102 ± 2                                        kallikrein     101 ± 1   32 ± 1                                         aPC            97 ± 3    103 ± 1                                        plasmin        107 ± 9   100 ± 1                                        r-tPA          96 ± 2    108 ± 3                                        urokinase      97 ± 1    103 ± 4                                        chymotrypsin   99 ± 0    96 ± 4                                         trypsin        93 ± 4    98 ± 4                                         ______________________________________                                    

Example E Assays for Measuring the Inhibition of the fVIIa/TF Complex byNAP

(1) fVIIa/TF fIX activation assay

This Example measures the ability of NAPs of the present invention toact as an inhibitor of the catalytic complex of fVIIa/TF, which has aprimary role in initiation of the coagulation response in the ex vivoprothrombin time assay (Example B). Activation of tritiated Factor IX bythe rFVIIa/rTF/PLV complex was assessed by determining the respectiveintrinsic inhibition constant, Ki*.

Lyophilized, purified, recombinant human factor VIIa was obtained fromBiosPacific, Inc. (Emeryville, Calif.), and reconstituted in HBS (10 mMHEPES, pH 7.5, 150 mM sodium chloride) prior to use. Purified humanFactor X was obtained from Enzyme Research Laboratories, Inc. (SouthBend, Ind.) and Factor Xa (free FXa) was activated and prepared fromFactor X as described (Bock, P. E., Craig, P. A., Olson, S. T., andSingh, P. Arch. Biochem. Biophys. 273:375-388 (1989)). Activesite-blocked human Factor Xa (EGR-FXa), which had been irreversiblyinactivated with L-Glutamyl-L-glycyl-L-arginyl chloromethylketone, wasobtained from Haematologic Technologies, Inc. (Essex Junction, Vt.).Recombinant human tissue factor (rTF) was produced by abaculovirus-expression system, and purified to homogeneity by monoclonalantibody affinity chromatography (Corvas International, Inc., San Diego,Calif.).

The purified rTF apoprotein was incorporated into phospholipid vesicles(rTF/PLV), consisting of phosphotidyl choline (75%, w/v) andphosphotidyl serine (25%, w/v) in the presence of detergent, asdescribed by Ruf et al. (Ruf, W., Miles, D. J., Rehemtulla, A., andEdgington, T. S. Methods in Enzymology 222: 209-224 (1993)). Thephospholipids were purchased from Avanti Polar Lipids, (Alabaster,Ala.). The buffer used for all assays was HBSA, HBS containing 0.1%(w/v) bovine serum albumin. All reagents were obtained from SigmaChemical Cb. (St. Louis, Mo.), unless otherwise indicated.

The activation of human ³ H-Factor IX (FIX) by the rFVIIa/rTF complexwas monitored by measuring the release of the radiolabelled activationpeptide. Purified human fIX was obtained from Haematologic Technologies,Inc. (Essex Junction, Vt.), and radioactively labelled by reductivetritiation as described (Van Lenten & Ashwell, 1971, JBC 246,1889-1894). The resulting tritiated preparation of FIX had a specificactivity of 194 clotting units/mg as measured in immuno-depleted FIXdeficient plasma (Ortho), and retained 97% of its activity. Theradiospecific activity was 2.7×10⁸ dpm/mg. The Km for the activation of³ H-FIX by rFVIIa/rTF/PLV was 25 nM, which was equivalent to the Kmobtained for untreated (unlabelled) FIX.

The assay for Ki* determinations was conducted as follows: rFVIIa andrTF/PLV were combined in a polypropylene test tube, and allowed to forma complex for 10 min in HBSA, containing 5 mm CaCl₂. Aliquots ofrFVIIa/rTF/PLV complex were combined in the appropriate polypropylenemicrocentrifuge tubes with EGR-FXa or free FXa, when included, andeither the NAP test compound at various concentrations, after dilutioninto HBSA, or HBSA alone (as V_(o) (uninhibited velocity) control).Following an incubation of 60 min at ambient temperature, reactions wereinitiated by the addition of ³ H-FIX. The final concentration of thereactants in 420 μl of HBSA was: rFVIIa [50 pM], rTF [2.7 nM], PLV [6.4micromolar], either EGR-FXa or free FXa [300 pM], recombinant NAP[5-1,500 pM], ³ H-FIX [200 nM], and CaCl₂ [5 mM]. In addition, abackground control reaction was run that included all of the abovereactants, except rFVIIa.

At specific time points (8, 16, 24, 32, and 40 min), 80 μl of thereaction mixture was added to an eppendorf tube that contained an equalvolume of 50 mM EDTA in HBS with 0.5% BSA to stop the reaction; this wasfollowed by the addition of 160 μL of 6% (w/v) trichloroacetic acid. Theprotein was precipitated, and separated from the supernatant bycentrifugation at 16,000×g for 6 min at 4° C. The radioactivitycontained in the resulting supernatant was measured by removingtriplicate aliquots that were added to Scintiverse BD (FisherScientific, Fairlawn, N.J.), and quantitated by liquid scintillationcounting. The control rate of activation was determined by linearregression analysis of the soluble counts released over time understeady-state conditions, where less than 5% of the tritiated FIX wasconsumed. The background control (<1.0% of control velocity) wassubtracted from all samples. Ratios of inhibited steady-state velocities(Vi), in the presence of a NAP, to the uninhibited control velocity ofrFVIIa/TF alone (V_(o)) were plotted against the correspondingconcentrations of NAP. These data were then directly fit to an equationfor tight-binding inhibitors [Morrison, J. F., and Walsh, C. T., Adv.Enzymol. 61:201-300 (1988)], from which the apparent equilibriumdissociation inhibitory constant K_(i) * was calculated.

The data for recombinant AcaNAP5, AcaNAP6, AcaNAPc2, and AceNAP4(prepared as described) is presented in Table 6 following Section B.below.

(2) Factor VIIa/Tissue factor amidolytic assay

The ability of NAPs of the present invention to act as an inhibitor ofthe amidolytic activity of the fVIIa/TF complex was assessed bydetermining the respective inhibition constant, Ki*, in the presence andabsence of active site-blocked human Factor Xa (EGR-fXa).

rFVIIa/rTF amidolytic activity was determined using the chromogenicsubstrate S-2288 (H-D-isoleucyl-L-prolyl-L-arginine-p-nitroaniline),obtained from Kabi Pharmacia Hepar, Inc. (Franklin, Ohio). The substratewas reconstituted in deionized water prior to use. rFVIIa and rTF/PLVwere combined in a polypropylene test tube, and allowed to form acomplex for 10 min in HBSA, containing 3 mM CaCl₂. The assay for Ki*determinations was conducted by combining in appropriate wells of aCorning microtiter plate 50 μL of the rFVIIa/rTF/PLV complex, 50 μL ofEGR-FXa, and 50 μL of either the NAP test compound at variousconcentrations, after dilution into HBSA, or HBSA alone (for V_(o)(uninhibited velocity) measurement). Following an incubation of 30 minat ambient temperature, the triplicate reactions were initiated byadding 50 μL of S-2288. The final concentration of reactants in a totalvolume of 200 μL of HBSA was: recombinant NAP (0.025-25 nM), rFVIIa (750pM), rTF (3.0 nM), PLV (6.4 micromolar), EGR-FXa (2.5 nM), and S-2288(3.0 mM, 3×Km).

The amidolytic activity of rFVIIa/rTF/PLV was measured as a linearincrease in the absorbance at 405 nm over 10 min (velocity), using aThermo Max® Kinetic Microplate Reader (Molecular Devices, Palo Alto,Calif.), under steady-state conditions, where less than 5% of thesubstrate was consumed. Ratios of inhibited pre-equilibrium,steady-state velocities (Vi), in the presence of NAP, to the uninhibitedvelocity in the presence of free fXa alone (V_(o)) were plotted againstthe corresponding concentrations of NAP. These data were then directlyfit to the same equation for tight-binding inhibitors, used in ExampleE.1., from which the apparent equilibrium dissociation inhibitoryconstant K_(i) * was calculated.

Table 6 below gives the Ki* values of recombinant AcaAPc2 [SEQ. ID. NO.59], AcNAP4 [SEQ. ID. NO. 62], AcaNAP5 [SEQ. ID. NO. 4], and AcaNAP6[SEQ. ID. NO. 6] (prepared in Pichia pastoris, as described) ininhibitory assays of rFVIIa/rTF activity. The data shows the utility ofAcaAPc2 and AceNAP4 as potent inhibitors of the human rFVIIa/rTF/PLVcomplex in the absence and presence of either free FXa or activesite-blocked FXa. The in vitro activity of AcaNAPc2P (see Example 17)was substantially the same as AcaNAPc2.

                  TABLE 6                                                         ______________________________________                                                Ki* (pM)                                                                      Amidolytic Assay                                                                            .sup.3 H-FIX Activation                                 NAP     No FXa   Plus EGR-                                                                              No FXa +free                                        Compound                                                                              Addition FXa      Addition                                                                             FXa   +EGR-FXa                               ______________________________________                                        AcaNAPc2                                                                              NI       36 ± 20                                                                             NI     35 ± 5                                                                           8.4 ± 1.5                           AceNAP4 59,230 ±                                                                            378 ± 37                                                                            ND     ND    ND                                             3,600                                                                 AcaNAP5 NI       NI       NI     NI    NI                                     AcaNAP6 NI       NI       NI     NI    NI                                     ______________________________________                                         NI = no inhibition                                                            ND = not determined                                                      

Example F In vivo Models of NAP Activity

(1) Evaluation of the antithrombotic activity of NAP in the rat model ofFeCl₃ -induced platelet-dependent arterial thrombosis

The antithrombotic (prevention of thrombus formation) properties of NAPwere evaluated using the established experimental rat model of acutevascular thrombosis.

The rat FeCl₃ model is a well characterized model of platelet dependent,arterial thrombosis which has been used to evaluate potentialantithrombotic compounds. Kurz, K. D., Main, B. W., and Sandusky, G. E.,Thromb. Res., 60: 269-280 (1990). In this model a platelet-rich,occlusive thrombus is formed in a segment of the rat carotid arterytreated locally with a fresh solution of FeCl₃ absorbed to a piece offilter paper. The FeCl₃ is thought to diffuse into the treated segmentof artery and cause de-endothelialization of the affected vesselsurface. This results in the exposure of blood to subendothelialstructures which in turn cause platelet adherence, thrombin formationand platelet aggregation. The net result is occlusive thrombusformation. The effect of a test compound on the incidence of occlusivethrombus formation following application of FeCl₃ is monitored byultrasonic flowtometry and is used as the primary end point. The use offlowtometry to measure carotid artery blood flow, is a modification ofthe original procedure in which thermal detection of clot formation wasemployed. Kurz, K. D., Main, B. W., and Sandusky, G. E., Thromb. Res.,60: 269-280 (1990).

(a) Intravenous administration

Male Harlan Sprague Dawley rats (420-450 g) were acclimated at least 72hours prior to use and fasted for 12 hours prior to surgery with freeaccess to water. The animals were prepared, anesthetized with Nembutalfollowed by the insertion of catheters for blood pressure monitoring,drug and anesthesia delivery. The left carotid artery was isolated bymaking a midline cervical incision followed by blunt dissection andspreading techniques to separate a 2 cm segment of the vessel from thecarotid sheath. A silk suture is inserted under the proximal and distalends of the isolated vessel to provide clearance for the placement of aultrasonic flow probe (Transonic) around the proximal end of the vessel.The probe is then secured with a stationary arm.

Following surgery the animals were randomized in either a control(saline) or treatment (recombinant AcaNAP5) group. The test compound(prepared in P. pastoris according to Example 3) was administered as asingle intravenous bolus at the doses outlined in Table 7 afterplacement of the flow probe and 5 min prior to the thrombogenicstimulus. At t=0, a 3 mm diameter piece of filter paper (Whatman #3)soaked with 10 μL of a 35% solution of fresh FeCl₃ (made up in water)was applied to the segment of isolated carotid artery distal to the flowprobe. Blood pressure, blood flow, heart rate, and respiration weremonitored for 60 minutes. The incidence of occlusion (defined as theattainment of zero blood flow) was recorded as the primary end point.

The efficacy of AcaNAP5 [SEQ. ID. NO. 4] as an antithrombotic agent inpreventing thrombus formation in this in vivo model was demonstrated bythe dose-dependent reduction in the incidence of thrombotic occlusion,as shown in Table 7 below.

                  TABLE 7                                                         ______________________________________                                        Treatment    Dose               Incidence of                                  Group        (mg/kg) n          Occlusion                                     ______________________________________                                        Saline       --      8          8/8                                           AcaNAP5      0.001   8          7/8                                           AcaNAP5      0.003   8          5/8                                           AcaNAP5      0.01    8          3/8*                                          AcaNAP5      0.03    8          1/8*                                          AcaNAP5      0.1     8          0/8*                                          AcaNAP5      0.3     4          0/4*                                          AcaNAP5      1.0     2          0/2*                                          ______________________________________                                         *-p ≦ 0.05 from saline control by Fishers test                    

The effective dose which prevents 50% of thrombotic occlusions in thismodel (ED₅₀) can be determined from the above data by plotting theincidence of occlusion versus the dose administered. This allows adirect comparison of the antithrombotic efficacy of AcaNAP5 with otherantithrombotic agents which have also been evaluated in this model asdescribed above. Table 8 below lists the ED₅₀ values for several wellknown anticoagulant agents in this model compared to AcaNAP5.

                  TABLE 8                                                         ______________________________________                                        Compound            ED.sub.50.sup.a                                           ______________________________________                                        Standard Heparin    300     U/kg                                              Argatroban          3.8     mg/kg                                             Hirulog ™        3.0     mg/kg                                             rTAP.sup.b          0.6     mg/kg                                             AcaNAP5             0.0055  mg/kg                                             ______________________________________                                         .sup.a ED.sub.50  is defined as the dose that prevents the incidence of       complete thrombotic occlusion in 50% of animals tested                        .sup.brecombinant Tick Anticoagulant Peptide, Vlasuk et al. Tromb.            Haemostas. 70: 212-216 (1993)                                            

(b) Subcutaneous administration

The antithrombotic effect of AcaNAP5 compared to Low Molecular Weightheparin (Enoxaparin; Lovenox, Rhone-Poulenc Rorer) after subcutaneousadministration was evaluated in rats using the FeCl₃ model. The modelwas performed in an identical manner to that described above with theexception that the compound was administered subcutaneously and efficacywas determined at two different times: 30 and 150 minutes afteradministration. To accomplish this, both carotid arteries were employedin a sequential manner. The results of these experiments indicate thatAcaNAP5 [SEQ. ID. NO. 4] is an effective antithrombotic agent in vivoafter subcutaneous administration. The results are shown below in Table9.

                  TABLE 9                                                         ______________________________________                                                        30" ED.sub.50.sup.a                                                                    150" ED.sub.50.sup.a                                 Compound        (mg/kg)  (mg/kg)                                              ______________________________________                                        Low Molecular   30.0     15.0                                                 Weight Heparin                                                                AcaNAP5         0.07     0.015                                                ______________________________________                                         .sup.a ED.sub.50  is defined as the dose that prevents the incidence of       complete thrombotic occlusion in 50% of animals tested.                  

(2) Deep Wound Bleeding Measurement

A model of deep wound bleeding was used to measure the effect of NAP onbleeding and compare the effect with that of Low Molecular WeightHeparin.

Male rats were anesthetized and instrumented in an identical manner tothose undergoing the FeCl₃ model. However, FeCl₃ was not applied to thecarotid artery. The deep surgical wound in the neck that exposes thecarotid artery was employed to quantify blood loss over time. Blood losswas measured over a period of 3.5 hours following subcutaneousadministration of either AcaNAP5 or LMWH. The wound was packed withsurgical sponges which were removed every 30 minutes. The sponges weresubsequently immersed in Drabkin's reagent (sigma Chemical Co., St.Louis, Mo.) which lyses the red blood cells and reacts with hemoglobinin a colorimetric fashion. The calorimetric samples were then quantifiedby measuring absorbance at 550 nM, which provides a determination of theamount of blood in the sponge.

The dose response characteristics for both test compounds are shown inFIG. 15 along with efficacy data for both compounds. AcaNAP5 [SEQ. ID.NO. 4] was much more potent than Low Molecular Weight heparin inpreventing occlusive arterial thrombus formation in this model.Furthermore, animals treated with NAP bled less than those treated withLow Molecular Weight heparin.

The data presented in Tables 7 and 9 and FIG. 15 clearly demonstrate theeffectiveness of NAP in preventing occlusive thrombus formation in thisexperimental model. The relevance of this data to preventing humanthrombosis is clear when compared to the other anticoagulant agents,listed in Table 8. These agents were been evaluated in the sameexperimental models described therein, in an identical manner to thatdescribed for NAPs, and in this experimental model and have demonstratedantithrombotic efficacy in preventing thrombus formation clinically, asdescribed in the following literature citations: Heparin-Hirsh, J. N.Engl. J. Med 324:1565-1574 1992, Cairns, J. A. et al. Chest 102:456S-481S (1992); Argatroban-Gold, H. K. et al. J. Am. Coll. Cardiol.21: 1039-1047 (1993); and Hirulog™-Sharma, G. V. R. K. et al. Am. J.Cardiol. 72: 1357-1360 (1993) and Lidon, R. M. et al. Circulation 88:1495-1501 (1993).

Example G Pig Model Of Acute Coronary Artery Thrombosis

The protocol used in these studies is a modification of a thrombosismodel which has been reported previously (Lucchesi, B. R., et al.,(1994), Brit. J. Pharmacol. 113:1333-1343).

Animals were anesthetized and instrumented with arterial and venouscatheters (left common carotid and external jugular, respectively). Athoracotomy was made in the 4th intercostal space and the heart wasexposed. The left anterior descending (LAD) coronary artery was isolatedfrom the overlying connective tissue and was instrumented with a Dopplerflow probe and a 17 gauge ligature stenosis. An anodal electrode alsowas implanted inside the vessel.

Baseline measurements were taken and the NAP or placebo to be tested wasadministered via the external jugular vein. Five minutes afteradministration, a direct current (300 μA, DC) was applied to thestimulating electrode to initiate intimal damage to the coronaryendothelium and begin thrombus formation. Current continued for a periodof 3 hours. Animals were observed until either 1 hour after thecessation of current or the death of the animal, whichever came first.

Table 10 presents data demonstrating the incidence of occlusion inanimals administered AcaNAP5 or AcaNAPc2P (see Example 17) at threeincreasing doses of NAP. The incidence of occlusion in the animalsreceiving placebo was 8/8 (100%). Time to occlusion in placebo treatedanimals was 66.6±7.5 min. (mean±sem). Vessels in AcaNAP treated pigsthat failed to occlude during the 4 hour period of observation wereassigned an arbitrary time to occlusion of 240 minutes in order tofacilitate statistical comparisons.

The data demonstrate AcaNAP5 and AcaNAPc2P were similarly efficacious inthis setting; both prolonged the time to coronary artery occlusion in adose dependent manner. Furthermore, both molecules significantlyprolonged in time to occlusion at a dose (0.03 mg/kg i.v.) that did notproduce significant elevations in bleeding. These data, and other,suggest AcaNAP5 and AcaNAPc2P have favorable therapeutic indices.

                                      TABLE 10                                    __________________________________________________________________________    Comparision of primary endpoints between                                      AcaNAPc2P and AcaNAP5 after intravenous dosing in the pig                     model of acute coronary artery thrombosis.                                    Dose                                                                              Incidence of                                                                             Time of Occlusion                                                                          Total Blood Loss                                  (i.v.)                                                                            Occlusion  (min)        (ml)                                              (mg/kg)                                                                           AcaNAP5                                                                            AcaNAPc2P                                                                           AcNAP5                                                                              ACaNAPc2P                                                                            ACaNAP5                                                                             AcaNAPc2P                                   __________________________________________________________________________    0.01                                                                              6/6  6/6   107 ± 13.0                                                                       105 ± 6.2                                                                          2.8 ± 0.8                                                                        1.6 ± 0.3                               0.03                                                                              5/6  4/6   150 ± 23.2                                                                       159 ± 27                                                                           5.6 ± 1.4                                                                        4.9 ± 1.4                               0.10                                                                              4/6   2/6  187 ± 22.9*                                                                      215 ± 25*                                                                         43.5 ± 18*                                                                       17.6 ± 7.9*                              __________________________________________________________________________      p < 0.:05 vs saline (8/8), Fisher's Exact; *p < 0.05 vs saline, ANOVA,       Dunnett's multiple comparison test.                                      

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CCG GAG TGT GGT GAG AAT GAA TGG CTC GAC GA - #C TGT GGA ACT CAG AAG          147                                                                          Pro Glu Cys Gly Glu Asn Glu Trp Leu Asp As - #p Cys Gly Thr Gln Lys           #            40                                                               - CCA TGC GAG GCC AAG TGC AAT GAG GAA CCC CC - #T GAG GAG GAA GAT CCG          195                                                                          Pro Cys Glu Ala Lys Cys Asn Glu Glu Pro Pr - #o Glu Glu Glu Asp Pro           #        55                                                                   - ATA TGC CGC TCA CGT GGT TGT TTA TTA CCT CC - #T GCT TGC GTA TGC AAA          243                                                                          Ile Cys Arg Ser Arg Gly Cys Leu Leu Pro Pr - #o Ala Cys Val Cys Lys           #    70                                                                       - GAC GGA TTC TAC AGA GAC ACG GTG ATC GGC GA - #C TGT GTT AGG GAA GAA          291                                                                          Asp Gly Phe Tyr Arg Asp Thr Val Ile Gly As - #p Cys Val Arg Glu Glu           #90                                                                           #GAACGAGAAA GCAACAATAA CC   344TA CAT GTC T                                   Glu Cys Asp Gln His Glu Ile Ile His Val                                       #                100                                                          - AAAGGTTCCA ACTCTCGCTC TGCAAAATCG CTAGTTGGAT GTCTCTTTTG CG - #TCCGAATA        404                                                                          - GTTTTAGTTG ATGTTAAGTA AGAACTCCTG CTGGAGAGAA TAAAGCTTTC CA - #ACTCC           461                                                                          - (2) INFORMATION FOR SEQ ID NO:4:                                            -      (i) SEQUENCE CHARACTERISTICS:                                          #      77 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     - 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    (xi) SEQUENCE DESCRIPTION: SEQ ID NO:5:                                 #ATC GCT ATA ATG       51 ATG AAG ATG CTT TAC GCT                             #Ala Ile Metys Met Leu Tyr Ala Ile                                            #    10                                                                       - TTT CTC CTG GTG TCA TTA TGC AGC ACA AGA AC - #A GTG AGG AAG GCA TAC           99                                                                          Phe Leu Leu Val Ser Leu Cys Ser Thr Arg Th - #r Val Arg Lys Ala Tyr           #                25                                                           - CCG GAG TGT GGT GAG AAT GAA TGG CTC GAC GT - #C TGT GGA ACT AAG AAG          147                                                                          Pro Glu Cys Gly Glu Asn Glu Trp Leu Asp Va - #l Cys Gly Thr Lys Lys           #            40                                                               - CCA TGC GAG GCC AAG TGC AGT GAG GAA GAG GA - #G GAA GAT CCG ATA TGC          195                                                                          Pro Cys Glu Ala Lys Cys Ser Glu Glu Glu Gl - 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CAACTTTCGC TCTACAAAAT CGCTAGTTGG ATTTCTCCTT TGCGTGCGAA TA - #GTTTTAGT        406                                                                          #              455CCTCC TGTTGAAGAG AATAAAGCTT TCCAACTTC                       - (2) INFORMATION FOR SEQ ID NO:6:                                            -      (i) SEQUENCE CHARACTERISTICS:                                          #      75 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:6:                                 - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p Leu Asp Val Cys Gly         #                15                                                           - 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Val                                                                         - (2) INFORMATION FOR SEQ ID NO:8:                                            -      (i) SEQUENCE CHARACTERISTICS:                                          #      79 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:8:                                 - Arg Thr Val Arg Lys Ala Tyr Pro Glu Cys Gl - #y Glu Asn Glu Trp Leu         #                15                                                           - Asp Val Cys Gly Thr Lys Lys Pro Cys Glu Al - #a Lys Cys Ser Glu Glu         #            30                                                               - Glu Glu Glu Asp Pro Ile Cys Arg Ser Phe Se - #r Cys Pro Gly Pro Ala         #        45                                                                   - Ala Cys Val Cys Glu Asp Gly Phe Tyr Arg As - #p Thr Val Ile Gly Asp         #    60                                                                       - Cys Val Lys Glu Glu Glu Cys Asp Gln His Gl - #u Ile Ile His Val             #75                                                                           - (2) INFORMATION FOR SEQ ID NO:9:                                            -      (i) SEQUENCE CHARACTERISTICS:                                          #      711 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 21...590                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:9:                                 #GTA GCA ATA GCG        50TG GCG GTG CTT TAT TCA                              #     Met Ala Val Leu Tyr Ser Val Al - #a Ile Ala                             #   10                                                                        - TTA CTA CTG GTA TCA CAA TGC AGT GGG AAA CC - #G AAC AAT GTG ATG ACT           98                                                                          Leu Leu Leu Val Ser Gln Cys Ser Gly Lys Pr - #o Asn Asn Val Met Thr           #                 25                                                          - AAC GCT TGT GGT CTT AAT GAA TAT TTC GCT GA - #G TGT GGC AAT ATG AAG          146                                                                          Asn Ala Cys Gly Leu Asn Glu Tyr Phe Ala Gl - #u Cys Gly Asn Met Lys           #             40                                                              - GAA TGC GAG CAC AGA TGC AAT GAG GAG GAA AA - #T GAG GAA AGG GAC GAG          194                                                                          Glu Cys Glu His Arg Cys Asn Glu Glu Glu As - #n Glu Glu Arg Asp Glu           #         55                                                                  - GAA AGA ATA ACG GCA TGC CTC ATC CGT GTG TG - #T TTC CGT CCT GGT GCT          242                                                                          Glu Arg Ile Thr Ala Cys Leu Ile Arg Val Cy - #s Phe Arg Pro Gly Ala           #     70                                                                      - TGC GTA TGC AAA GAC GGA TTC TAT AGA AAC AG - #A ACA GGC AGC TGT GTG          290                                                                          Cys Val Cys Lys Asp Gly Phe Tyr Arg Asn Ar - #g Thr Gly Ser Cys Val           # 90                                                                          - GAA GAA GAT GAC TGC GAG TAC GAG AAT ATG GA - #G TTC ATT ACT TTT GCA          338                                                                          Glu Glu Asp Asp Cys Glu Tyr Glu Asn Met Gl - #u Phe Ile Thr Phe Ala           #                105                                                          - CCA GAA GTA CCG ATA TGT GGT TCC AAC GAA AG - #G TAC TCC GAC TGC GGC          386                                                                          Pro Glu Val Pro Ile Cys Gly Ser Asn Glu Ar - #g Tyr Ser Asp Cys Gly           #           120                                                               - AAT GAC AAA CAA TGC GAG CGC AAA TGC AAC GA - #G GAC GAT TAT GAG AAG          434                                                                          Asn Asp Lys Gln Cys Glu Arg Lys Cys Asn Gl - #u Asp Asp Tyr Glu Lys           #       135                                                                   - GGA GAT GAG GCA TGC CGC TCA CAT GTT TGT GA - #A CGT CCT GGT GCC TGT          482                                                                          Gly Asp Glu Ala Cys Arg Ser His Val Cys Gl - #u Arg Pro Gly Ala Cys           #   150                                                                       - GTA TGC GAA GAC GGG TTC TAC AGA AAC AAA AA - #A GGT AGC TGT GTG GAA          530                                                                          Val Cys Glu Asp Gly Phe Tyr Arg Asn Lys Ly - #s Gly Ser Cys Val Glu           155                 1 - #60                 1 - #65                 1 -       #70                                                                           - AGC GAT GAC TGC GAA TAC GAT AAT ATG GAT TT - #C ATC ACT TTT GCA CCA          578                                                                          Ser Asp Asp Cys Glu Tyr Asp Asn Met Asp Ph - #e Ile Thr Phe Ala Pro           #               185                                                           - GAA ACC TCA CGA TAACCAAAGA TGCTACCTCT CGTACGCAAC TC - #CGCTGATT GAGGTT       636                                                                          Glu Thr Ser Arg                                                                           190                                                               - GATTCACTCC CTTGCATCTC AACATTTTTT TTGTGATGCT GTGCATCTGA GC - #TTAACCTG        696                                                                          #   711                                                                       - (2) INFORMATION FOR SEQ ID NO:10:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      425 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 10...291                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:10:                                - GAATTCCGC ATG CGG ACG CTC TAC CTC ATT TCT ATC - # TGG TTG TTC CTC ATC         51                                                                          #Leu Ile Ser Ile Trp Leu Phe Leu Ile                                          #        10                                                                   - TCG CAA TGT AAT GGA AAA GCA TTC CCG AAA TG - #T GAC GTC AAT GAA AGA           99                                                                          Ser Gln Cys Asn Gly Lys Ala Phe Pro Lys Cy - #s Asp Val Asn Glu Arg           #30                                                                           - TTC GAG GTG TGT GGC AAT CTG AAG GAG TGC GA - #G CTC AAG TGC GAT GAG          147                                                                          Phe Glu Val Cys Gly Asn Leu Lys Glu Cys Gl - #u Leu Lys Cys Asp Glu           #                45                                                           - GAC CCT AAG ATA TGC TCT CGT GCA TGT ATT CG - #T CCC CCT GCT TGC GTA          195                                                                          Asp Pro Lys Ile Cys Ser Arg Ala Cys Ile Ar - #g Pro Pro Ala Cys Val           #            60                                                               - TGC GAT GAC GGA TTC TAC AGA GAC AAA TAT GG - #C TTC TGT GTT GAA GAA          243                                                                          Cys Asp Asp Gly Phe Tyr Arg Asp Lys Tyr Gl - #y Phe Cys Val Glu Glu           #        75                                                                   - GAC GAA TGT AAC GAT ATG GAG ATT ATT ACT TT - #T CCA CCA GAA ACC AAA TG       293                                                                          Asp Glu Cys Asn Asp Met Glu Ile Ile Thr Ph - #e Pro Pro Glu Thr Lys           #    90                                                                       - ATGACCGAAG CTTCCACCTT TCTATACATA TCTTCACTGC TTGACAGGCT TC - #TCGACAAT        353                                                                          - TTAGAAGTTC TGCTTGACTT TGTCTATTTG AAATTGTTCA CACTAATGGG GG - #AAGTAAAG        413                                                                          #      425                                                                    - (2) INFORMATION FOR SEQ ID NO:11:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      471 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 23...310                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:11:                                - GAATTCCGCT ACATTTTCAA CA ATG TCG ACG CTT TAT GTT - # ATC GCA ATA TGT          52                                                                          #       Met Ser Thr Leu Tyr Val I - #le Ala Ile Cys                           #    10                                                                       - TTG CTG CTT GTT TCG CAA TGC AAT GGA AGA AC - #G GTG AAG AAG TGT GGC          100                                                                          Leu Leu Leu Val Ser Gln Cys Asn Gly Arg Th - #r Val Lys Lys Cys Gly           #                25                                                           - AAG AAT GAA AGA TAC GAC GAC TGT GGC AAT GC - #A AAG GAC TGC GAG ACC          148                                                                          Lys Asn Glu Arg Tyr Asp Asp Cys Gly Asn Al - #a Lys Asp Cys Glu Thr           #            40                                                               - AAG TGC GGT GAA GAG GAA AAG GTG TGC CGT TC - #G CGT GAG TGT ACT AGT          196                                                                          Lys Cys Gly Glu Glu Glu Lys Val Cys Arg Se - #r Arg Glu Cys Thr Ser           #        55                                                                   - CCT GGT GCC TGC GTA TGC GAA CAA GGA TTC TA - #C AGA GAT CCG GCT GGC          244                                                                          Pro Gly Ala Cys Val Cys Glu Gln Gly Phe Ty - #r Arg Asp Pro Ala Gly           #    70                                                                       - GAC TGT GTC ACT GAT GAA GAA TGT GAT GAA TG - #G AAC AAT ATG GAG ATC          292                                                                          Asp Cys Val Thr Asp Glu Glu Cys Asp Glu Tr - #p Asn Asn Met Glu Ile           #90                                                                           - ATT ACT ATG CCA AAA CAG TAGTGCGAAG TTCCCTTCTT TC - #TCCAAATC TGCTCCGTG       349                                                                          Ile Thr Met Pro Lys Gln                                                                       95                                                            - CTCAATTATC ACACACCTCC ACTAGTTAAG ATTGACTGAC TCTCTTGCAT TG - #TAGTATTT        409                                                                          - TCGCTTGACT CTGTGCATTT AAGCATGAGA TACTACTAGG GAGAATAAAA AT - #TACTAACT        469                                                                          #             471                                                             - (2) INFORMATION FOR SEQ ID NO:12:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      396 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 10...237                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:12:                                - GAATTCCGG AAA TGT CCT ACC GAT GAA TGG TTC GAT - # TGG TGT GGA ACT TAC         51                                                                          #Glu Trp Phe Asp Trp Cys Gly Thr Tyr                                          #        10                                                                   - AAG CAT TGC GAA CTC AAG TGC GAT AGG GAG CT - #A ACT GAG AAA GAA GAG           99                                                                          Lys His Cys Glu Leu Lys Cys Asp Arg Glu Le - #u Thr Glu Lys Glu Glu           #30                                                                           - CAG GCA TGT CTC TCA CGT GTT TGT GAG AAG TC - #C GCT TGC GTA TGC AAT          147                                                                          Gln Ala Cys Leu Ser Arg Val Cys Glu Lys Se - #r Ala Cys Val Cys Asn           #                45                                                           - GAC GGA TTA TAC AGA GAC AAG TTT GGC AAC TG - #T GTT GAA AAA GAC GAA          195                                                                          Asp Gly Leu Tyr Arg Asp Lys Phe Gly Asn Cy - #s Val Glu Lys Asp Glu           #            60                                                               - TGC AAC GAT ATG GAG ATT ATT ACT TTT GCA CC - #A GAA ACC AAA TAATGGCCTA       247                                                                          Cys Asn Asp Met Glu Ile Ile Thr Phe Ala Pr - #o Glu Thr Lys                   #        75                                                                   - AGGTTCCAAA CCTTGCTACA CACCGTCAGT GCTTTACTGT TTCCTCTACG TG - #TTAGTAGT        307                                                                          - TTTGCTTGAC TCTGTGTATT TAAGCATTGT CTACTAATGG GCAAAGTAAA GC - #ATTGTAAG        367                                                                          #           396    AACC TTCTGATTT                                             - (2) INFORMATION FOR SEQ ID NO:13:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      688 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 21...560                                              -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:13:                                #GTT CCT ATC TGG        50TG CGA ATG CTC TAC CTT                              #     Met Arg Met Leu Tyr Leu Val Pr - #o Ile Trp                             #   10                                                                        - TTG CTG CTC ATT TCG CTA TGC AGT GGA AAA GC - #T GCG AAG AAA TGT GGT          98                                                                           Leu Leu Leu Ile Ser Leu Cys Ser Gly Lys Al - #a Ala Lys Lys Cys Gly           #                25                                                           - CTC AAT GAA AGG CTG GAC TGT GGC AAT CTG AA - #G CAA TGC GAG CCC AAG         146                                                                           Leu Asn Glu Arg Leu Asp Cys Gly Asn Leu Ly - #s Gln Cys Glu Pro Lys           #             40                                                              - TGC AGC GAC TTG GAA AGT GAG GAG TAT GAG GA - #G GAA GAT GAG TCG AAA         194                                                                           Cys Ser Asp Leu Glu Ser Glu Glu Tyr Glu Gl - #u Glu Asp Glu Ser Lys           #        55                                                                   - TGT CGA TCA CGT GAA TGT TCT CGT CGT GTT TG - #T GTA TGC GAT GAA GGA         242                                                                           Cys Arg Ser Arg Glu Cys Ser Arg Arg Val Cy - #s Val Cys Asp Glu Gly           #     70                                                                      - TTC TAC AGA AAC AAG AAG GGC AAG TGT GTT GC - #A AAA GAT GTT TGC GAG         290                                                                           Phe Tyr Arg Asn Lys Lys Gly Lys Cys Val Al - #a Lys Asp Val Cys Glu           #90                                                                           - GAC GAC AAT ATG GAG ATT ATC ACT TTT CCA CC - #A GAA GAC GAA TGT GGT         338                                                                           Asp Asp Asn Met Glu Ile Ile Thr Phe Pro Pr - #o Glu Asp Glu Cys Gly           #                105                                                          - CCC GAT GAA TGG TTC GAC TAC TGT GGA AAT TA - #T AAG AAG TGC GAA CGC         386                                                                           Pro Asp Glu Trp Phe Asp Tyr Cys Gly Asn Ty - #r Lys Lys Cys Glu Arg           #           120                                                               - AAG TGC AGT GAG GAG ACA AGT GAG AAA AAT GA - #G GAG GCA TGC CTC TCT         434                                                                           Lys Cys Ser Glu Glu Thr Ser Glu Lys Asn Gl - #u Glu Ala Cys Leu Ser           #       135                                                                   - CGT GCT TGT ACT GGT CGT GCT TGC GTA TGC AA - #A GAC GGA TTG TAC AGA         482                                                                           Arg Ala Cys Thr Gly Arg Ala Cys Val Cys Ly - #s Asp Gly Leu Tyr Arg           #   150                                                                       - GAC GAC TTT GGC AAC TGT GTT CCA CAT GAC GA - #A TGC AAC GAT ATG GAG         530                                                                           Asp Asp Phe Gly Asn Cys Val Pro His Asp Gl - #u Cys Asn Asp Met Glu           155                 1 - #60                 1 - #65                 1 -       #70                                                                           - ATC ATC ACT TTT CCA CCG GAA ACC AAA CAT TG - #ACCAGAGG CTCCAACTCT CGCT      584                                                                           Ile Ile Thr Phe Pro Pro Glu Thr Lys His                                       #               180                                                           - ACACAACGTC AGGGCTAGAA TGGCCCCTCT GCGAGTTAGT AGTTTTGCTT GA - #CTCTGCTT       644                                                                           #                 688GA TGGCGAAAAT AAAGCATTTA AAAC                            - (2) INFORMATION FOR SEQ ID NO:14:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      349 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Heligmosomoides polygyrus                                               -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 49...276                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:14:                                #ATC CGA      57CTGAGAG GTGAGCTACG CAAGTCTTCG CTGGTACA ATG                    #                 Met - # Ile Arg                                             #1                                                                            - AAG CTC GTT CTG CTG ACT GCT ATC GTC ACG GT - #G GTG CTA AGT GCG AAG          105                                                                          Lys Leu Val Leu Leu Thr Ala Ile Val Thr Va - #l Val Leu Ser Ala Lys           #     15                                                                      - ACC TGT GGA CCA AAC GAG GAG TAC ACT GAA TG - #C GGG ACG CCA TGC GAG          153                                                                          Thr Cys Gly Pro Asn Glu Glu Tyr Thr Glu Cy - #s Gly Thr Pro Cys Glu           #35                                                                           - CCG AAG TGC AAT GAA CCG ATG CCA GAC ATC TG - #T ACT CTG AAC TGC ATC          201                                                                          Pro Lys Cys Asn Glu Pro Met Pro Asp Ile Cy - #s Thr Leu Asn Cys Ile           #                50                                                           - GTG AAC GTG TGT CAG TGC AAA CCC GGC TTC AA - #G CGC GGA CCG AAA GGA          249                                                                          Val Asn Val Cys Gln Cys Lys Pro Gly Phe Ly - #s Arg Gly Pro Lys Gly           #            65                                                               - TGC GTC GCC CCC GGA CCA GGC TGT AAA TAGTTCTCC - #A CCTGCCCTTT CGTTGGAA       304                                                                          Cys Val Ala Pro Gly Pro Gly Cys Lys                                           #        75                                                                   #                 349CA TTCTGAATCA ATAAAGCCGA ACGGT                           - (2) INFORMATION FOR SEQ ID NO:15:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      432 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 40...393                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:15:                                - AAGCTTTGCT AACATACTGC GTAATAAGGA GTCTTAATC ATG CCA GTT - # CTT TTG            54                                                                          #       Met Pro Val Leu Leu                                                   #     5  1                                                                    - GGT ATT CCG TTA TTA TTG CGT TTC CTC GGT TT - #C CTT CTG GTA ACT TTG         102                                                                           Gly Ile Pro Leu Leu Leu Arg Phe Leu Gly Ph - #e Leu Leu Val Thr Leu           #                20                                                           - TTC GGC TAT CTG CTT ACT TTC CTT AAA AAG GG - #C TTC GGT AAG ATA GCT         150                                                                           Phe Gly Tyr Leu Leu Thr Phe Leu Lys Lys Gl - #y Phe Gly Lys Ile Ala           #            35                                                               - ATT GCT ATT TCA TTG TTT CTT GCT CTT ATT AT - #T GGG CTT AAC TCA ATT         198                                                                           Ile Ala Ile Ser Leu Phe Leu Ala Leu Ile Il - #e Gly Leu Asn Ser Ile           #        50                                                                   - CTT GTG GGT TAT CTC TCT GAT ATT AGC GCA CA - #A TTA CCC TCT GAT TTT         246                                                                           Leu Val Gly Tyr Leu Ser Asp Ile Ser Ala Gl - #n Leu Pro Ser Asp Phe           #    65                                                                       - GTT CAG GGC GTT CAG TTA ATT CTC CCG TCT AA - #T GCG CTT CCC TGT TTT         294                                                                           Val Gln Gly Val Gln Leu Ile Leu Pro Ser As - #n Ala Leu Pro Cys Phe           #85                                                                           - TAT GTT ATT CTC TCT GTA AAG GCT GCT ATT TT - #C ATT TTT GAC GTT AAA         342                                                                           Tyr Val Ile Leu Ser Val Lys Ala Ala Ile Ph - #e Ile Phe Asp Val Lys           #                100                                                          - CAA AAA ATC GTT TCT TAT TTG GAT TGG GAT AA - #A GGT GGA GGC TCA GGC         390                                                                           Gln Lys Ile Val Ser Tyr Leu Asp Trp Asp Ly - #s Gly Gly Gly Ser Gly           #           115                                                               #432               CATCCCAT ATCACGCGGC CGCGGATCC                              Gly                                                                           - (2) INFORMATION FOR SEQ ID NO:16:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      433 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 40...393                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:16:                                - AAGCTTTGCT AACATACTGC GTAATAAGGA GTCTTAATC ATG CCA GTT - # CTT TTG            54                                                                          #       Met Pro Val Leu Leu                                                   #     5  1                                                                    - GGT ATT CCG TTA TTA TTG CGT TTC CTC GGT TT - #C CTT CTG GTA ACT TTG          102                                                                          Gly Ile Pro Leu Leu Leu Arg Phe Leu Gly Ph - #e Leu Leu Val Thr Leu           #                20                                                           - TTC GGC TAT CTG CTT ACT TTC CTT AAA AAG GG - #C TTC GGT AAG ATA GCT          150                                                                          Phe Gly Tyr Leu Leu Thr Phe Leu Lys Lys Gl - #y Phe Gly Lys Ile Ala           #            35                                                               - ATT GCT ATT TCA TTG TTT CTT GCT CTT ATT AT - #T GGG CTT AAC TCA ATT          198                                                                          Ile Ala Ile Ser Leu Phe Leu Ala Leu Ile Il - #e Gly Leu Asn Ser Ile           #        50                                                                   - CTT GTG GGT TAT CTC TCT GAT ATT AGC GCA CA - #A TTA CCC TCT GAT TTT          246                                                                          Leu Val Gly Tyr Leu Ser Asp Ile Ser Ala Gl - #n Leu Pro Ser Asp Phe           #    65                                                                       - GTT CAG GGC GTT CAG TTA ATT CTC CCG TCT AA - #T GCG CTT CCC TGT TTT          294                                                                          Val Gln Gly Val Gln Leu Ile Leu Pro Ser As - #n Ala Leu Pro Cys Phe           #85                                                                           - TAT GTT ATT CTC TCT GTA AAG GCT GCT ATT TT - #C ATT TTT GAC GTT AAA          342                                                                          Tyr Val Ile Leu Ser Val Lys Ala Ala Ile Ph - #e Ile Phe Asp Val Lys           #                100                                                          - CAA AAA ATC GTT TCT TAT TTG GAT TGG GAT AA - #A GGT GGA GGC TCA GGC          390                                                                          Gln Lys Ile Val Ser Tyr Leu Asp Trp Asp Ly - #s Gly Gly Gly Ser Gly           #           115                                                               #433               CCATCCCA TATCACGCGG CCGCGGATCC                             Gly                                                                           - (2) INFORMATION FOR SEQ ID NO:17:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      434 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 40...393                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:17:                                - AAGCTTTGCT AACATACTGC GTAATAAGGA GTCTTAATC ATG CCA GTT - # CTT TTG            54                                                                          #       Met Pro Val Leu Leu                                                   #     5  1                                                                    - GGT ATT CCG TTA TTA TTG CGT TTC CTC GGT TT - #C CTT CTG GTA ACT TTG          102                                                                          Gly Ile Pro Leu Leu Leu Arg Phe Leu Gly Ph - #e Leu Leu Val Thr Leu           #                20                                                           - TTC GGC TAT CTG CTT ACT TTC CTT AAA AAG GG - #C TTC GGT AAG ATA GCT          150                                                                          Phe Gly Tyr Leu Leu Thr Phe Leu Lys Lys Gl - #y Phe Gly Lys Ile Ala           #            35                                                               - ATT GCT ATT TCA TTG TTT CTT GCT CTT ATT AT - #T GGG CTT AAC TCA ATT          198                                                                          Ile Ala Ile Ser Leu Phe Leu Ala Leu Ile Il - #e Gly Leu Asn Ser Ile           #        50                                                                   - CTT GTG GGT TAT CTC TCT GAT ATT AGC GCA CA - #A TTA CCC TCT GAT TTT          246                                                                          Leu Val Gly Tyr Leu Ser Asp Ile Ser Ala Gl - #n Leu Pro Ser Asp Phe           #    65                                                                       - GTT CAG GGC GTT CAG TTA ATT CTC CCG TCT AA - #T GCG CTT CCC TGT TTT          294                                                                          Val Gln Gly Val Gln Leu Ile Leu Pro Ser As - #n Ala Leu Pro Cys Phe           #85                                                                           - TAT GTT ATT CTC TCT GTA AAG GCT GCT ATT TT - #C ATT TTT GAC GTT AAA          342                                                                          Tyr Val Ile Leu Ser Val Lys Ala Ala Ile Ph - #e Ile Phe Asp Val Lys           #                100                                                          - CAA AAA ATC GTT TCT TAT TTG GAT TGG GAT AA - #A GGT GGA GGC TCA GGC          390                                                                          Gln Lys Ile Val Ser Tyr Leu Asp Trp Asp Ly - #s Gly Gly Gly Ser Gly           #           115                                                               #434               GCCATCCC ATATCACGCG GCCGCGGATC C                           Gly                                                                           - (2) INFORMATION FOR SEQ ID NO:18:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      6 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:18:                                - Gly Gly Gly Ser Gly Gly                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:19:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      430 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 10...282                                              # "W" stands for A or TORMATION:                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:19:                                - GAATTCCGG CTG GTW TCC TAC TGC AGT GGA AAA GCA - # ACG ATG CAG TGT GGT         51                                                                          #Ser Gly Lys Ala Thr Met Gln Cys Gly                                          #        10                                                                   - GAG AAT GAA AAG TAC GAT TCG TGC GGT AGC AA - #G GAG TGC GAT AAG AAG           99                                                                          Glu Asn Glu Lys Tyr Asp Ser Cys Gly Ser Ly - #s Glu Cys Asp Lys Lys           #30                                                                           - TGC AAA TAT GAC GGA GTT GAG GAG GAA GAC GA - #C GAG GAA CCT AAT GTG          147                                                                          Cys Lys Tyr Asp Gly Val Glu Glu Glu Asp As - #p Glu Glu Pro Asn Val           #                45                                                           - CCA TGC CTA GTA CGT GTG TGT CAT CAA GAT TG - #C GTA TGC GAA GAA GGA          195                                                                          Pro Cys Leu Val Arg Val Cys His Gln Asp Cy - #s Val Cys Glu Glu Gly           #            60                                                               - TTC TAT AGA AAC AAA GAT GAC AAA TGT GTA TC - #A GCA GAA GAC TGC GAA          243                                                                          Phe Tyr Arg Asn Lys Asp Asp Lys Cys Val Se - #r Ala Glu Asp Cys Glu           #        75                                                                   - CTT GAC AAT ATG GAC TTT ATA TAT CCC GGA AC - #T CGA AAC TGAACGAAGG CTC       295                                                                          Leu Asp Asn Met Asp Phe Ile Tyr Pro Gly Th - #r Arg Asn                       #    90                                                                       - CATTCTTGCT GCACAAGATC GATTGTCTCT CCCCTGCATC TCAGTAGTTT TG - #CTACATTG        355                                                                          - TATATGGTAG CAAAAAATTA GCTTAGGGAG AATAAAATCT TTACCTATAT TT - #AATCAATG        415                                                                          #   430                                                                       - (2) INFORMATION FOR SEQ ID NO:20:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      100 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:20:                                - Met Lys Met Leu Tyr Ala Ile Ala Ile Met Ph - #e Leu Leu Val Ser Leu         #                15                                                           - Cys Ser Ala Arg Thr Val Arg Lys Ala Tyr Pr - #o Glu Cys Gly Glu Asn         #            30                                                               - Glu Trp Leu Asp Asp Cys Gly Thr Gln Lys Pr - #o Cys Glu Ala Lys Cys         #        45                                                                   - Asn Glu Glu Pro Pro Glu Glu Glu Asp Pro Il - #e Cys Arg Ser Arg Gly         #    60                                                                       - Cys Leu Leu Pro Pro Ala Cys Val Cys Lys As - #p Gly Phe Tyr Arg Asp         #80                                                                           - Thr Val Ile Gly Asp Cys Val Arg Glu Glu Gl - #u Cys Asp Gln His Glu         #                95                                                           - Ile Ile His Val                                                                         100                                                               - (2) INFORMATION FOR SEQ ID NO:21:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      98 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:21:                                - Met Lys Met Leu Tyr Ala Ile Ala Ile Met Ph - #e Leu Leu Val Ser Leu         #                15                                                           - Cys Ser Thr Arg Thr Val Arg Lys Ala Tyr Pr - #o Glu Cys Gly Glu Asn         #            30                                                               - Glu Trp Leu Asp Val Cys Gly Thr Lys Lys Pr - #o Cys Glu Ala Lys Cys         #        45                                                                   - Ser Glu Glu Glu Glu Glu Asp Pro Ile Cys Ar - #g Ser Phe Ser Cys Pro         #    60                                                                       - Gly Pro Ala Ala Cys Val Cys Glu Asp Gly Ph - #e Tyr Arg Asp Thr Val         #80                                                                           - Ile Gly Asp Cys Val Lys Glu Glu Glu Cys As - #p Gln His Glu Ile Ile         #                95                                                           - His Val                                                                     - (2) INFORMATION FOR SEQ ID NO:22:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      94 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:22:                                - Met Arg Thr Leu Tyr Leu Ile Ser Ile Trp Le - #u Phe Leu Ile Ser Gln         #                15                                                           - Cys Asn Gly Lys Ala Phe Pro Lys Cys Asp Va - #l Asn Glu Arg Phe Glu         #            30                                                               - Val Cys Gly Asn Leu Lys Glu Cys Glu Leu Ly - #s Cys Asp Glu Asp Pro         #        45                                                                   - Lys Ile Cys Ser Arg Ala Cys Ile Arg Pro Pr - #o Ala Cys Val Cys Asp         #    60                                                                       - Asp Gly Phe Tyr Arg Asp Lys Tyr Gly Phe Cy - #s Val Glu Glu Asp Glu         #80                                                                           - Cys Asn Asp Met Glu Ile Ile Thr Phe Pro Pr - #o Glu Thr Lys                 #                90                                                           - (2) INFORMATION FOR SEQ ID NO:23:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      96 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:23:                                - Met Ser Thr Leu Tyr Val Ile Ala Ile Cys Le - #u Leu Leu Val Ser Gln         #                15                                                           - Cys Asn Gly Arg Thr Val Lys Lys Cys Gly Ly - #s Asn Glu Arg Tyr Asp         #            30                                                               - Asp Cys Gly Asn Ala Lys Asp Cys Glu Thr Ly - #s Cys Gly Glu Glu Glu         #        45                                                                   - Lys Val Cys Arg Ser Arg Glu Cys Thr Ser Pr - #o Gly Ala Cys Val Cys         #    60                                                                       - Glu Gln Gly Phe Tyr Arg Asp Pro Ala Gly As - #p Cys Val Thr Asp Glu         #80                                                                           - Glu Cys Asp Glu Trp Asn Asn Met Glu Ile Il - #e Thr Met Pro Lys Gln         #                95                                                           - (2) INFORMATION FOR SEQ ID NO:24:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      108 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:24:                                - Met Ala Val Leu Tyr Ser Val Ala Ile Ala Le - #u Leu Leu Val Ser Gln         #                15                                                           - Cys Ser Gly Lys Pro Asn Asn Val Met Thr As - #n Ala Cys Gly Leu Asn         #            30                                                               - Glu Tyr Phe Ala Glu Cys Gly Asn Met Lys Gl - #u Cys Glu His Arg Cys         #        45                                                                   - Asn Glu Glu Glu Asn Glu Glu Arg Asp Glu Gl - #u Arg Ile Thr Ala Cys         #    60                                                                       - Leu Ile Arg Val Cys Phe Arg Pro Gly Ala Cy - #s Val Cys Lys Asp Gly         #80                                                                           - Phe Tyr Arg Asn Arg Thr Gly Ser Cys Val Gl - #u Glu Asp Asp Cys Glu         #                95                                                           - Tyr Glu Asn Met Glu Phe Ile Thr Phe Ala Pr - #o Glu                         #           105                                                               - (2) INFORMATION FOR SEQ ID NO:25:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      82 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:25:                                - Val Pro Ile Cys Gly Ser Asn Glu Arg Tyr Se - #r Asp Cys Gly Asn Asp         #                15                                                           - Lys Gln Cys Glu Arg Lys Cys Asn Glu Asp As - #p Tyr Glu Lys Gly Asp         #            30                                                               - Glu Ala Cys Arg Ser His Val Cys Glu Arg Pr - #o Gly Ala Cys Val Cys         #        45                                                                   - Glu Asp Gly Phe Tyr Arg Asn Lys Lys Gly Se - #r Cys Val Glu Ser Asp         #    60                                                                       - Asp Cys Glu Tyr Asp Asn Met Asp Phe Ile Th - #r Phe Ala Pro Glu Thr         #80                                                                           - Ser Arg                                                                     - (2) INFORMATION FOR SEQ ID NO:26:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      75 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:26:                                - Lys Cys Pro Thr Asp Glu Trp Phe Asp Trp Cy - #s Gly Thr Tyr Lys His         #                15                                                           - Cys Glu Leu Lys Cys Asp Arg Glu Leu Thr Gl - #u Glu Glu Gln Ala Cys         #            30                                                               - Leu Ser Arg Val Cys Glu Lys Ser Ala Cys Va - #l Cys Asn Asp Gly Leu         #        45                                                                   - Tyr Arg Asp Lys Phe Gly Asn Cys Val Glu Ly - #s Asp Glu Cys Asn Asp         #    60                                                                       - Met Glu Ile Ile Thr Phe Ala Pro Glu Thr Ly - #s                             #75                                                                           - (2) INFORMATION FOR SEQ ID NO:27:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      102 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:27:                                - Met Arg Met Leu Tyr Leu Val Pro Ile Trp Le - #u Leu Leu Ile Ser Leu         #                15                                                           - Cys Ser Gly Lys Ala Ala Lys Lys Cys Gly Le - #u Asn Glu Arg Leu Asp         #            30                                                               - Cys Gly Asn Leu Lys Gln Cys Glu Pro Lys Cy - #s Ser Asp Leu Glu Ser         #        45                                                                   - Glu Glu Tyr Glu Glu Glu Asp Glu Ser Lys Cy - #s Arg Ser Arg Glu Cys         #    60                                                                       - Ser Arg Arg Val Cys Val Cys Asp Glu Gly Ph - #e Tyr Arg Asn Lys Lys         #80                                                                           - Gly Lys Cys Val Ala Lys Asp Val Cys Glu As - #p Asp Asn Met Glu Ile         #                95                                                           - Ile Thr Phe Pro Pro Glu                                                                 100                                                               - (2) INFORMATION FOR SEQ ID NO:28:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      78 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:28:                                - Asp Glu Cys Gly Pro Asp Glu Trp Phe Asp Ty - #r Cys Gly Asn Tyr Lys         #                15                                                           - Lys Cys Glu Arg Lys Cys Ser Glu Glu Thr Se - #r Glu Lys Asn Glu Glu         #            30                                                               - Ala Cys Leu Ser Arg Ala Cys Thr Gly Arg Al - #a Cys Val Cys Lys Asp         #        45                                                                   - Gly Leu Tyr Arg Asp Asp Phe Gly Asn Cys Va - #l Pro His Asp Glu Cys         #    60                                                                       - Asn Asp Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Thr Lys His                 #75                                                                           - (2) INFORMATION FOR SEQ ID NO:29:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      76 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Heligmosomoides polygyrus                                               -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:29:                                - Met Ile Arg Lys Leu Val Leu Leu Thr Ala Il - #e Val Thr Val Val Leu         #                15                                                           - Ser Ala Lys Thr Cys Gly Pro Asn Glu Glu Ty - #r Thr Glu Cys Gly Thr         #            30                                                               - Pro Cys Glu Pro Lys Cys Asn Glu Pro Met Pr - #o Asp Ile Cys Thr Leu         #        45                                                                   - Asn Cys Ile Val Asn Val Cys Gln Cys Lys Pr - #o Gly Phe Lys Arg Gly         #    60                                                                       - Pro Lys Gly Cys Val Ala Pro Gly Pro Gly Cy - #s Lys                         #75                                                                           - (2) INFORMATION FOR SEQ ID NO:30:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      187 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:30:                                - TTATTCGAAA CGATGTTCTC TCCAATTTTG TCCTTGGAAA TTATTTTAGC TA - #CTTTGCAA         60                                                                          - TCTGTCTTCG CCCAGCCAGT TATCTCCACT ACCGTTGGTT CCGCTGCCGA GG - #GTTCTTTG        120                                                                          - GACAAGAGGC CTATCCGCGG AATTCAGATC TGAATGCGGC CGCTCGAGAC TA - #GTGGATCC        180                                                                          #         187                                                                 - (2) INFORMATION FOR SEQ ID NO:31:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      495 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 36...356                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:31:                                #CTC TAT ATT        53T TGCTACTACT CAACG ATG AAG ACG                          #   Met Lys Thr Leu Tyr Ile                                                   # 5  1                                                                        - GTC GCT ATA TGC TCG CTC CTC ATT TCG CTG TG - #T ACT GGA AAA CCT TCG          101                                                                          Val Ala Ile Cys Ser Leu Leu Ile Ser Leu Cy - #s Thr Gly Lys Pro Ser           #            20                                                               - GAG AAA GAA TGT GGT CCC CAT GAA AGA CTC GA - #C TGT GGC AAC AAG AAG          149                                                                          Glu Lys Glu Cys Gly Pro His Glu Arg Leu As - #p Cys Gly Asn Lys Lys           #        35                                                                   - CCA TGC GAG CGC AAG TGC AAA ATA GAG ACA AG - #T GAG GAG GAG GAT GAC          197                                                                          Pro Cys Glu Arg Lys Cys Lys Ile Glu Thr Se - #r Glu Glu Glu Asp Asp           #    50                                                                       - TAC GAA GAG GGA ACC GAA CGT TTT CGA TGC CT - #C TTA CGT GTG TGT GAT          245                                                                          Tyr Glu Glu Gly Thr Glu Arg Phe Arg Cys Le - #u Leu Arg Val Cys Asp           #70                                                                           - CAG CCT TAT GAA TGC ATA TGC GAT GAT GGA TA - #C TAC AGA AAC AAG AAA          293                                                                          Gln Pro Tyr Glu Cys Ile Cys Asp Asp Gly Ty - #r Tyr Arg Asn Lys Lys           #                85                                                           - GGC GAA TGT GTG ACT GAT GAT GTA TGC CAG GA - #A GAC TTT ATG GAG TTT          341                                                                          Gly Glu Cys Val Thr Asp Asp Val Cys Gln Gl - #u Asp Phe Met Glu Phe           #            100                                                              - ATT ACT TTC GCA CCA TAAACCCAAT AATGACCAAT GACTCCCAT - #T CTTCGTGATC AG       398                                                                          Ile Thr Phe Ala Pro                                                                   105                                                                   - CGTCGGTGGT TGACAGTCTC CCCTACATCT TAGTAGTTTT GCTTGATAAT GT - #ATACATAA        458                                                                          #     495          TAGA ATAAAGCTCT CAACTAC                                    - (2) INFORMATION FOR SEQ ID NO:32:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      478 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 24...341                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:32:                                - GAATTCCGCG GAATTCCGCA ACG ATG AAG ACG CTC TAT AT - #T ATC GCT ATA TGC         53                                                                          #Ile Ala Ile Cys Thr Leu Tyr Ile                                              #      10                                                                     - TCG CTC CTC ATT TCG TTG TGT ACT GGA AGA CC - #G GAA AAA AAG TGC GGT          101                                                                          Ser Leu Leu Ile Ser Leu Cys Thr Gly Arg Pr - #o Glu Lys Lys Cys Gly           #                25                                                           - CCC GGT GAA AGA CTC GCC TGT GGC AAT AAG AA - #G CCA TGC GAG CGC AAG          149                                                                          Pro Gly Glu Arg Leu Ala Cys Gly Asn Lys Ly - #s Pro Cys Glu Arg Lys           #            40                                                               - TGC AAA ATA GAG ACA AGT GAG GAG GAG GAT GA - #C TAC CCA GAG GGA ACC          197                                                                          Cys Lys Ile Glu Thr Ser Glu Glu Glu Asp As - #p Tyr Pro Glu Gly Thr           #        55                                                                   - GAA CGT TTT CGA TGC CTC TTA CGT GTG TGT GA - #T CAG CCT TAT GAA TGC          245                                                                          Glu Arg Phe Arg Cys Leu Leu Arg Val Cys As - #p Gln Pro Tyr Glu Cys           #    70                                                                       - ATA TGC GAT GAT GGA TAC TAC AGA AAC AAG AA - #A GGC GAA TGT GTG ACT          293                                                                          Ile Cys Asp Asp Gly Tyr Tyr Arg Asn Lys Ly - #s Gly Glu Cys Val Thr           #90                                                                           - GAT GAT GTA TGC CAG GAA GAC TTT ATG GAG TT - #T ATT ACT TTC GCA CCA          341                                                                          Asp Asp Val Cys Gln Glu Asp Phe Met Glu Ph - #e Ile Thr Phe Ala Pro           #                105                                                          - TAAACCCAAT AATGACCACT GGCTCCCATT CTTCGTGACC AGCGTCGGTG GT - #TGACAGTC        401                                                                          - TCCCCTGCAT CTTAGTAGTT TTGCTTGATA ATGTATCCAT AAACAGTACT TT - #CTGAGATA        461                                                                          #  478             T                                                          - (2) INFORMATION FOR SEQ ID NO:33:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      472 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 21...335                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:33:                                #ATC GCT ATA TGC        50TG AAG ACG CTC TAT ATT                              #     Met Lys Thr Leu Tyr Ile Ile Al - #a Ile Cys                             #   10                                                                        - TCG CTG CTC TTT TCA CTG TGT ACT GGA AGA CC - #G GAA AAA AAG TGC GGT           98                                                                          Ser Leu Leu Phe Ser Leu Cys Thr Gly Arg Pr - #o Glu Lys Lys Cys Gly           #                 25                                                          - CCC GGT GAA AGA CTC GAC TGT GCC AAC AAG AA - #G CCA TGC GAG CCC AAG          146                                                                          Pro Gly Glu Arg Leu Asp Cys Ala Asn Lys Ly - #s Pro Cys Glu Pro Lys           #             40                                                              - TGC AAA ATA GAG ACA AGT GAG GAG GAG GAT GA - #C GAC GTA GAG GAT ACC          194                                                                          Cys Lys Ile Glu Thr Ser Glu Glu Glu Asp As - #p Asp Val Glu Asp Thr           #         55                                                                  - GAT GTG AGA TGC CTC GTA CGT GTG TGT GAA CG - #T CCT CTT AAA TGC ATA          242                                                                          Asp Val Arg Cys Leu Val Arg Val Cys Glu Ar - #g Pro Leu Lys Cys Ile           #     70                                                                      - TGC AAG GAT GGA TAC TAC AGA AAC AAG AAA GG - #C GAA TGT GTG ACT GAT          290                                                                          Cys Lys Asp Gly Tyr Tyr Arg Asn Lys Lys Gl - #y Glu Cys Val Thr Asp           # 90                                                                          - GAT GTA TGC CAG GAA GAC TTT ATG GAG TTT AT - #T ACT TTC GCA CCA TAAACC       341                                                                          Asp Val Cys Gln Glu Asp Phe Met Glu Phe Il - #e Thr Phe Ala Pro               #                105                                                          - CAATAATGAC CACTGGCTCC CATTCTTCGT GATCAGCGTC GGTGGTTGAC AG - #TCTCCCCT        401                                                                          - GCATCTTAGT TGCTTTGCTT GATAATCTAT ACATAAACAG TACTTTCTGA GA - #TAGAATAA        461                                                                          #      472                                                                    - (2) INFORMATION FOR SEQ ID NO:34:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      487 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 57...347                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:34:                                - GAATTCCGGA CTTACTAGTA CTCAGCGAAT CAAATACGAC TTACTACTAC TC - #AACG ATG         59                                                                          #        Met                                                                  #         1                                                                   - AAG ACG CTC TCT GCT ATC CCT ATA ATG CTG CT - #C CTG GTA TCG CAA TGC          107                                                                          Lys Thr Leu Ser Ala Ile Pro Ile Met Leu Le - #u Leu Val Ser Gln Cys           #             15                                                              - AGT GGA AAA TCA CTG TGG GAT CAG AAG TGT GG - #T GAG AAT GAA AGG CTC          155                                                                          Ser Gly Lys Ser Leu Trp Asp Gln Lys Cys Gl - #y Glu Asn Glu Arg Leu           #        30                                                                   - GAC TGT GGC AAT CAG AAG GAC TGT GAG CGC AA - #G TGC GAT GAT AAA AGA          203                                                                          Asp Cys Gly Asn Gln Lys Asp Cys Glu Arg Ly - #s Cys Asp Asp Lys Arg           #    45                                                                       - AGT GAA GAA GAA ATT ATG CAG GCA TGT CTC AC - #A CGT CAA TGT CTT CCT          251                                                                          Ser Glu Glu Glu Ile Met Gln Ala Cys Leu Th - #r Arg Gln Cys Leu Pro           #65                                                                           - CCT GTT TGC GTA TGT GAA GAT GGA TTC TAC AG - #A AAT GAC AAC GAC CAA          299                                                                          Pro Val Cys Val Cys Glu Asp Gly Phe Tyr Ar - #g Asn Asp Asn Asp Gln           #                80                                                           - TGT GTT GAT GAA GAA GAA TGC AAT ATG GAG TT - #T ATT ACT TTC GCA CCA TG       349                                                                          Cys Val Asp Glu Glu Glu Cys Asn Met Glu Ph - #e Ile Thr Phe Ala Pro           #            95                                                               - AAGCAAATGA CAGCCGATGG TTTGGACTCT CGCTACAGAT CACAGCTTTA CT - #GTTTCCCT        409                                                                          - TGCATCATAG TAGTTTTGCT AGATAGTGTA TATATTAGCA TGATTTTCTG AT - #AGGGAGAA        469                                                                          # 487              TC                                                         - (2) INFORMATION FOR SEQ ID NO:35:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      477 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 24...338                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:35:                                - GAATTCCGCG GAATTCCGCA ACG ATG AAG ACG CTC TAT AT - #T ATC GCT ATA TGC         53                                                                          #Ile Ala Ile Cys Thr Leu Tyr Ile                                              #      10                                                                     - TCG CTC CTC ATT TCG CTG TGT ACT GGA AGA CC - #G GAA AAA AAG TGC GGT          101                                                                          Ser Leu Leu Ile Ser Leu Cys Thr Gly Arg Pr - #o Glu Lys Lys Cys Gly           #                25                                                           - CCC GGT GAA AGA CTC GAC TGT GCC AAC AAG AA - #G CCA TGC GAG CCC AAG          149                                                                          Pro Gly Glu Arg Leu Asp Cys Ala Asn Lys Ly - #s Pro Cys Glu Pro Lys           #            40                                                               - TGC AAA ATA GAG ACA AGT GAG GAG GAG GAT GA - #C GAC GTA GAG GAA ACC          197                                                                          Cys Lys Ile Glu Thr Ser Glu Glu Glu Asp As - #p Asp Val Glu Glu Thr           #        55                                                                   - GAT GTG AGA TGC CTC GTA CGT GTG TGT GAA CG - #G CCT CTT AAA TGC ATA          245                                                                          Asp Val Arg Cys Leu Val Arg Val Cys Glu Ar - #g Pro Leu Lys Cys Ile           #    70                                                                       - TGC AAG GAT GGA TAC TAC AGA AAC AAG AAA GG - #C GAA TGT GTG ACT GAT          293                                                                          Cys Lys Asp Gly Tyr Tyr Arg Asn Lys Lys Gl - #y Glu Cys Val Thr Asp           #90                                                                           - GAT GTA TGC CAG GAA GAC TTT ATG GAG TTT AT - #T ACT TTC GCA CCA TAAACC       344                                                                          Asp Val Cys Gln Glu Asp Phe Met Glu Phe Il - #e Thr Phe Ala Pro               #                105                                                          - CAATAATGAC CACTGGCTCC CATTCTTCGT GATCAGCGTC GGTGGTTGAC AG - #TCTCCCCT        404                                                                          - GCATCTTAGT TGCTTTGCTT GATAATCTAT ACATAAACAG TACTTTCTGA GA - #TAGAATAA        464                                                                          #     477                                                                     - (2) INFORMATION FOR SEQ ID NO:36:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      686 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 14...556                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:36:                                - GAATTCCGGA AAA ATG CTG ATG CTC TAC CTT GTT CC - #T ATC TGG TTG CTA            49                                                                          #Met Leu Tyr Leu Val Pro Ile Trp Leu Leu                                      #             10                                                              - CTC ATT TCG CAA TGC AGT GGA AAA TCC GCG AA - #G AAA TGT GGT CTC AAT           97                                                                          Leu Ile Ser Gln Cys Ser Gly Lys Ser Ala Ly - #s Lys Cys Gly Leu Asn           #        25                                                                   - GAA AAA TTG GAC TGT GGC AAT CTG AAG GCA TG - #C GAG AAA AAG TGC AGC          145                                                                          Glu Lys Leu Asp Cys Gly Asn Leu Lys Ala Cy - #s Glu Lys Lys Cys Ser           #    40                                                                       - GAC TTG GAC AAT GAG GAG GAT TAT AAG GAG GA - #A GAT GAG TCG AAA TGC          193                                                                          Asp Leu Asp Asn Glu Glu Asp Tyr Lys Glu Gl - #u Asp Glu Ser Lys Cys           #60                                                                           - CGA TCA CGT GAA TGT AGT CGT CGT GTT TGT GT - #A TGC GAT GAA GGA TTC          241                                                                          Arg Ser Arg Glu Cys Ser Arg Arg Val Cys Va - #l Cys Asp Glu Gly Phe           #                75                                                           - TAC AGA AAC AAG AAG GGC CAA TGT GTG ACA AG - #A GAT GAT TGC GAG TAT          289                                                                          Tyr Arg Asn Lys Lys Gly Gln Cys Val Thr Ar - #g Asp Asp Cys Glu Tyr           #            90                                                               - GAC AAT ATG GAG ATT ATC ACT TTT CCA CCA GA - #A GAT AAA TGT GGT CCC          337                                                                          Asp Asn Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Asp Lys Cys Gly Pro           #        105                                                                  - GAT GAA TGG TTC GAC TGG TGT GGA ACT TAC AA - #G CAG TGT GAG CGC AAG          385                                                                          Asp Glu Trp Phe Asp Trp Cys Gly Thr Tyr Ly - #s Gln Cys Glu Arg Lys           #   120                                                                       - TGC AAT AAG GAG CTA AGT GAG AAA GAT GAA GA - #G GCA TGC CTC TCA CGT          433                                                                          Cys Asn Lys Glu Leu Ser Glu Lys Asp Glu Gl - #u Ala Cys Leu Ser Arg           125                 1 - #30                 1 - #35                 1 -       #40                                                                           - GCT TGT ACT GGT CGT GCT TGT GTT TGC AAC GA - #C GGA CTG TAC AGA GAC          481                                                                          Ala Cys Thr Gly Arg Ala Cys Val Cys Asn As - #p Gly Leu Tyr Arg Asp           #               155                                                           - GAT TTT GGC AAT TGT GTT GAG AAA GAC GAA TG - #T AAC GAT ATG GAG ATT          529                                                                          Asp Phe Gly Asn Cys Val Glu Lys Asp Glu Cy - #s Asn Asp Met Glu Ile           #           170                                                               - ATC ACT TTT CCA CCG GAA ACC AAA CAC TGACCAAAG - #G CTCTAACTCT CGCTACAT       584                                                                          Ile Thr Phe Pro Pro Glu Thr Lys His                                           #       180                                                                   - AACGTCAGTG CTTGAATTGC CCCTTTACGA GTTAGTAATT TTGACTAACT CT - #GTGTAATT        644                                                                          # 686              TGGT GAAAATGAAG TGTTCAATGT CT                              - (2) INFORMATION FOR SEQ ID NO:37:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      707 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 34...576                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:37:                                - GAATTCCGCG GAATTCCGGT TGGCGGCAGA AAA ATG CTG ATG CT - #C TAC CTT GTT          54                                                                          # Met Leu Met Leu Tyr Leu Val                                                 #  1               5                                                          - CCT ATC TGG TTC CTG CTC ATT TCG CAA TGC AG - #T GGA AAA TCC GCG AAG          102                                                                          Pro Ile Trp Phe Leu Leu Ile Ser Gln Cys Se - #r Gly Lys Ser Ala Lys           #        20                                                                   - AAA TGT GGC CTC AAT GAA AAA TTG GAC TGT GG - #C AAT CTG AAG GCA TGC          150                                                                          Lys Cys Gly Leu Asn Glu Lys Leu Asp Cys Gl - #y Asn Leu Lys Ala Cys           #    35                                                                       - GAG AAA AAG TGC AGC GAC TTG GAC AAT GAG GA - #G GAT TAT GGG GAG GAA          198                                                                          Glu Lys Lys Cys Ser Asp Leu Asp Asn Glu Gl - #u Asp Tyr Gly Glu Glu           #55                                                                           - GAT GAG TCG AAA TGC CGA TCA CGT GAA TGT AT - #T GGT CGT GTT TGC GTA          246                                                                          Asp Glu Ser Lys Cys Arg Ser Arg Glu Cys Il - #e Gly Arg Val Cys Val           #                70                                                           - TGC GAT GAA GGA TTC TAC AGA AAC AAG AAG GG - #C CAA TGT GTG ACA AGA          294                                                                          Cys Asp Glu Gly Phe Tyr Arg Asn Lys Lys Gl - #y Gln Cys Val Thr Arg           #            85                                                               - GAC GAT TGC GAG TAT GAC AAT ATG GAG ATT AT - #C ACT TTT CCA CCA GAA          342                                                                          Asp Asp Cys Glu Tyr Asp Asn Met Glu Ile Il - #e Thr Phe Pro Pro Glu           #        100                                                                  - GAT AAA TGT GGT CCC GAT GAA TGG TTC GAC TG - #G TGT GGA ACT TAC AAG          390                                                                          Asp Lys Cys Gly Pro Asp Glu Trp Phe Asp Tr - #p Cys Gly Thr Tyr Lys           #   115                                                                       - CAG TGT GAG CGC AAG TGC AGT GAG GAG CTA AG - #T GAG AAA AAT GAG GAG          438                                                                          Gln Cys Glu Arg Lys Cys Ser Glu Glu Leu Se - #r Glu Lys Asn Glu Glu           120                 1 - #25                 1 - #30                 1 -       #35                                                                           - GCA TGC CTC TCA CGT GCT TGT ACT GGT CGT GC - #T TGC GTT TGC AAC GAC          486                                                                          Ala Cys Leu Ser Arg Ala Cys Thr Gly Arg Al - #a Cys Val Cys Asn Asp           #               150                                                           - GGA TTG TAT AGA GAC GAT TTT GGC AAT TGT GT - #T GAG AAA GAC GAA TGT          534                                                                          Gly Leu Tyr Arg Asp Asp Phe Gly Asn Cys Va - #l Glu Lys Asp Glu Cys           #           165                                                               - AAC GAT ATG GAG ATT ATC ACT TTT CCA CCG GA - #A ACC AAA CAC TGACCAAAGG       586                                                                          Asn Asp Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Thr Lys His                   #       180                                                                   - CTCTAGCTCT CGCTACATAA CGTCAGTGCT TGAATTGTCC CTTTACGTGT TA - #GTAATTTT        646                                                                          - GACTAACTCT GTGTATTTGA GCATTGTCTA CTAATGGTGA AAATGAAGCT TT - #TCAATGAC        706                                                                          #              707                                                            - (2) INFORMATION FOR SEQ ID NO:38:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      529 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 31...309                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:38:                                #TAT GTT ATC TCT     54 CTACTCAACG  ATG AAG GCG CTC                           #Lys Ala Leu Tyr Val Ile Ser                                                  #              5  1                                                           - ATA ACG TTG CTC CTG GTA TGG CAA TGC AGT GC - #A AGA ACA GCG AGG AAA          102                                                                          Ile Thr Leu Leu Leu Val Trp Gln Cys Ser Al - #a Arg Thr Ala Arg Lys           #     20                                                                      - CCC CCA ACG TGT GGT GAA AAT GAA AGG GTC GA - #A TGG TGT GGC AAG CAG          150                                                                          Pro Pro Thr Cys Gly Glu Asn Glu Arg Val Gl - #u Trp Cys Gly Lys Gln           # 40                                                                          - TGC GAG ATC ACA TGT GAC GAC CCA GAT AAG AT - #A TGC CGC TCA CTC GCT          198                                                                          Cys Glu Ile Thr Cys Asp Asp Pro Asp Lys Il - #e Cys Arg Ser Leu Ala           #                 55                                                          - TGT CCT GGT CCT CCT GCT TGC GTA TGC GAC GA - #C GGA TAC TAC AGA GAC          246                                                                          Cys Pro Gly Pro Pro Ala Cys Val Cys Asp As - #p Gly Tyr Tyr Arg Asp           #             70                                                              - ACG AAC GTT GGC TTG TGT GTA CAA TAT GAC GA - #A TGC AAC GAT ATG GAT          294                                                                          Thr Asn Val Gly Leu Cys Val Gln Tyr Asp Gl - #u Cys Asn Asp Met Asp           #         85                                                                  - ATT ATT ATG GTT TCA TAGGGTTGAC TGAAGAATCG AACAACCGG - #T GCACAACTTC          349                                                                          Ile Ile Met Val Ser                                                                90                                                                       - TATGCTTGAC TATCTCTCTT GCATCATGCA AGTTTAGCTA GATAGTGTAT AT - #ATTAGCAA        409                                                                          - GACCCCTTGG GGAGAATGAA GCTTCCCAAC TATATTAAAT CAATAACGTT TT - #CGCTTCAT        469                                                                          - GTACACGTGC TCAGCACATT CATATCCACT CCTCACACTC CATGAAAGCA GT - #GAAATGTT        529                                                                          - (2) INFORMATION FOR SEQ ID NO:39:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      361 base pairs                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (vi) ORIGINAL SOURCE:                                                   #     Necator americanus                                                      -     (ix) FEATURE:                                                                     (A) NAME/KEY: Coding Se - #quence                                             (B) LOCATION: 16...252                                              -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:39:                                #CTT TCT CTC CTG TTT      51GA GGC CTC GTT CTT                                #Ile Arg Gly Leu Val Leu Leu Ser Leu Leu P - #he                              #               10                                                            - TGC GTC ACT TTT GCA GCG AAG AGA GAT TGT CC - #A GCA AAT GAG GAA TGG           99                                                                          Cys Val Thr Phe Ala Ala Lys Arg Asp Cys Pr - #o Ala Asn Glu Glu Trp           #        25                                                                   - AGG GAA TGT GGC ACT CCA TGT GAA CCA AAA TG - #C AAT CAA CCG ATG CCA          147                                                                          Arg Glu Cys Gly Thr Pro Cys Glu Pro Lys Cy - #s Asn Gln Pro Met Pro           #    40                                                                       - GAT ATA TGT ACT ATG AAT TGT ATC GTC GAT GT - #G TGT CAA TGC AAG GAG          195                                                                          Asp Ile Cys Thr Met Asn Cys Ile Val Asp Va - #l Cys Gln Cys Lys Glu           #60                                                                           - GGA TAC AAG CGT CAT GAA ACG AAG GGA TGC TT - #A AAG GAA GGA TCA GCT          243                                                                          Gly Tyr Lys Arg His Glu Thr Lys Gly Cys Le - #u Lys Glu Gly Ser Ala           #                75                                                           - GAT TGT AAA TAAGTTATCA GAACGCTCGT TTTGTCTTAC ATTAGATGG - #G TGAGCTGATG       302                                                                          Asp Cys Lys                                                                   - TATCTGTCAG ATAAACTCTT TCTTCTAAAA AAAAAAAAAA AAAAAAAAAA AA - #AAAAAAA        361                                                                           - (2) INFORMATION FOR SEQ ID NO:40:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      77 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:40:                                - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p Leu Asp Asp Cys Gly         #                15                                                           - Thr Gln Lys Pro Cys Glu Ala Lys Cys Asn Gl - #u Glu Pro Pro Glu Glu         #            30                                                               - Glu Asp Pro Ile Cys Arg Ser Arg Gly Cys Le - #u Leu Pro Pro Ala Cys         #        45                                                                   - Val Cys Lys Asp Gly Phe Tyr Arg Asp Thr Va - #l Ile Gly Asp Cys Val         #    60                                                                       - Arg Glu Glu Glu Cys Asp Gln His Glu Ile Il - #e His Val                     #75                                                                           - (2) INFORMATION FOR SEQ ID NO:41:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      75 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:41:                                - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p Leu Asp Val Cys Gly         #                15                                                           - Thr Lys Lys Pro Cys Glu Ala Lys Cys Ser Gl - #u Glu Glu Glu Glu Asp         #            30                                                               - Pro Ile Cys Arg Ser Phe Ser Cys Pro Gly Pr - #o Ala Ala Cys Val Cys         #        45                                                                   - Glu Asp Gly Phe Tyr Arg Asp Thr Val Ile Gl - #y Asp Cys Val Lys Glu         #    60                                                                       - Glu Glu Cys Asp Gln His Glu Ile Ile His Va - #l                             #75                                                                           - (2) INFORMATION FOR SEQ ID NO:42:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      74 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:42:                                - Arg Thr Ala Arg Lys Pro Pro Thr Cys Gly Gl - #u Asn Glu Arg Val Glu         #                15                                                           - Trp Cys Gly Lys Gln Cys Glu Ile Thr Cys As - #p Asp Pro Asp Lys Ile         #            30                                                               - Cys Arg Ser Leu Ala Cys Pro Gly Pro Pro Al - #a Cys Val Cys Asp Asp         #        45                                                                   - Gly Tyr Tyr Arg Asp Thr Asn Val Gly Leu Cy - #s Val Gln Tyr Asp Glu         #    60                                                                       - Cys Asn Asp Met Asp Ile Ile Met Val Ser                                     #70                                                                           - (2) INFORMATION FOR SEQ ID NO:43:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      88 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:43:                                - Lys Pro Ser Glu Lys Glu Cys Gly Pro His Gl - #u Arg Leu Asp Cys Gly         #                15                                                           - Asn Lys Lys Pro Cys Glu Arg Lys Cys Lys Il - #e Glu Thr Ser Glu Glu         #            30                                                               - Glu Asp Asp Tyr Glu Glu Gly Thr Glu Arg Ph - #e Arg Cys Leu Leu Arg         #        45                                                                   - Val Cys Asp Gln Pro Tyr Glu Cys Ile Cys As - #p Asp Gly Tyr Tyr Arg         #    60                                                                       - Asn Lys Lys Gly Glu Cys Val Thr Asp Asp Va - #l Cys Gln Glu Asp Phe         #80                                                                           - Met Glu Phe Ile Thr Phe Ala Pro                                                             85                                                            - (2) INFORMATION FOR SEQ ID NO:44:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      87 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:44:                                - Arg Pro Glu Lys Lys Cys Gly Pro Gly Glu Ar - #g Leu Ala Cys Gly Asn         #                15                                                           - Lys Lys Pro Cys Glu Arg Lys Cys Lys Ile Gl - #u Thr Ser Glu Glu Glu         #            30                                                               - Asp Asp Tyr Pro Glu Gly Thr Glu Arg Phe Ar - #g Cys Leu Leu Arg Val         #        45                                                                   - Cys Asp Gln Pro Tyr Glu Cys Ile Cys Asp As - #p Gly Tyr Tyr Arg Asn         #    60                                                                       - Lys Lys Gly Glu Cys Val Thr Asp Asp Val Cy - #s Gln Glu Asp Phe Met         #80                                                                           - Glu Phe Ile Thr Phe Ala Pro                                                                 85                                                            - (2) INFORMATION FOR SEQ ID NO:45:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      86 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:45:                                - Arg Pro Glu Lys Lys Cys Gly Pro Gly Glu Ar - #g Leu Asp Cys Ala Asn         #                15                                                           - Lys Lys Pro Cys Glu Pro Lys Cys Lys Ile Gl - #u Thr Ser Glu Glu Glu         #            30                                                               - Asp Asp Asp Val Glu Asp Thr Asp Val Arg Cy - #s Leu Val Arg Val Cys         #        45                                                                   - Glu Arg Pro Leu Lys Cys Ile Cys Lys Asp Gl - #y Tyr Tyr Arg Asn Lys         #    60                                                                       - Lys Gly Glu Cys Val Thr Asp Asp Val Cys Gl - #n Glu Asp Phe Met Glu         #80                                                                           - Phe Ile Thr Phe Ala Pro                                                                     85                                                            - (2) INFORMATION FOR SEQ ID NO:46:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      86 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:46:                                - Arg Pro Glu Lys Lys Cys Gly Pro Gly Glu Ar - #g Leu Asp Cys Ala Asn         #                15                                                           - Lys Lys Pro Cys Glu Pro Lys Cys Lys Ile Gl - #u Thr Ser Glu Glu Glu         #            30                                                               - Asp Asp Asp Val Glu Glu Thr Asp Val Arg Cy - #s Leu Val Arg Val Cys         #        45                                                                   - Glu Arg Pro Leu Lys Cys Ile Cys Lys Asp Gl - #y Tyr Tyr Arg Asn Lys         #    60                                                                       - Lys Gly Glu Cys Val Thr Asp Asp Val Cys Gl - #n Glu Asp Phe Met Glu         #80                                                                           - Phe Ile Thr Phe Ala Pro                                                                     85                                                            - (2) INFORMATION FOR SEQ ID NO:47:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      78 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:47:                                - Lys Ser Leu Trp Asp Gln Lys Cys Gly Glu As - #n Glu Arg Leu Asp Cys         #                15                                                           - Gly Asn Gln Lys Asp Cys Glu Arg Lys Cys As - #p Asp Lys Arg Ser Glu         #            30                                                               - Glu Glu Ile Met Gln Ala Cys Leu Thr Arg Gl - #n Cys Leu Pro Pro Val         #        45                                                                   - Cys Val Cys Glu Asp Gly Phe Tyr Arg Asn As - #p Asn Asp Gln Cys Val         #    60                                                                       - Asp Glu Glu Glu Cys Asn Met Glu Phe Ile Th - #r Phe Ala Pro                 #75                                                                           - (2) INFORMATION FOR SEQ ID NO:48:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      89 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:48:                                - Lys Pro Asn Asn Val Met Thr Asn Ala Cys Gl - #y Leu Asn Glu Tyr Phe         #                15                                                           - Ala Glu Cys Gly Asn Met Lys Glu Cys Glu Hi - #s Arg Cys Asn Glu Glu         #            30                                                               - Glu Asn Glu Glu Arg Asp Glu Glu Arg Ile Th - #r Ala Cys Leu Ile Arg         #        45                                                                   - Val Cys Phe Arg Pro Gly Ala Cys Val Cys Ly - #s Asp Gly Phe Tyr Arg         #    60                                                                       - Asn Arg Thr Gly Ser Cys Val Glu Glu Asp As - #p Cys Glu Tyr Glu Asn         #80                                                                           - Met Glu Phe Ile Thr Phe Ala Pro Glu                                                         85                                                            - (2) INFORMATION FOR SEQ ID NO:49:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      82 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:49:                                - Val Pro Ile Cys Gly Ser Asn Glu Arg Tyr Se - #r Asp Cys Gly Asn Asp         #                15                                                           - Lys Gln Cys Glu Arg Lys Cys Asn Glu Asp As - #p Tyr Glu Lys Gly Asp         #            30                                                               - Glu Ala Cys Arg Ser His Val Cys Glu Arg Pr - #o Gly Ala Cys Val Cys         #        45                                                                   - Glu Asp Gly Phe Tyr Arg Asn Lys Lys Gly Se - #r Cys Val Glu Ser Asp         #    60                                                                       - Asp Cys Glu Tyr Asp Asn Met Asp Phe Ile Th - #r Phe Ala Pro Glu Thr         #80                                                                           - Ser Arg                                                                     - (2) INFORMATION FOR SEQ ID NO:50:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      84 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:50:                                - Lys Ser Ala Lys Lys Cys Gly Leu Asn Glu Ly - #s Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Ala Cys Glu Lys Lys Cys Ser Asp Le - #u Asp Asn Glu Glu Asp         #            30                                                               - Tyr Lys Glu Glu Asp Glu Ser Lys Cys Arg Se - #r Arg Glu Cys Ser Arg         #        45                                                                   - Arg Val Cys Val Cys Asp Glu Gly Phe Tyr Ar - #g Asn Lys Lys Gly Gln         #    60                                                                       - Cys Val Thr Arg Asp Asp Cys Glu Tyr Asp As - #n Met Glu Ile Ile Thr         #80                                                                           - Phe Pro Pro Glu                                                             - (2) INFORMATION FOR SEQ ID NO:51:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      84 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:51:                                - Lys Ser Ala Lys Lys Cys Gly Leu Asn Glu Ly - #s Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Ala Cys Glu Lys Lys Cys Ser Asp Le - #u Asp Asn Glu Glu Asp         #            30                                                               - Tyr Gly Glu Glu Asp Glu Ser Lys Cys Arg Se - #r Arg Glu Cys Ile Gly         #        45                                                                   - Arg Val Cys Val Cys Asp Glu Gly Phe Tyr Ar - #g Asn Lys Lys Gly Gln         #    60                                                                       - Cys Val Thr Arg Asp Asp Cys Glu Tyr Asp As - #n Met Glu Ile Ile Thr         #80                                                                           - Phe Pro Pro Glu                                                             - (2) INFORMATION FOR SEQ ID NO:52:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      83 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:52:                                - Lys Ala Ala Lys Lys Cys Gly Leu Asn Glu Ar - #g Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Gln Cys Glu Pro Lys Cys Ser Asp Le - #u Glu Ser Glu Glu Tyr         #            30                                                               - Glu Glu Glu Asp Glu Ser Lys Cys Arg Ser Ar - #g Glu Cys Ser Arg Arg         #        45                                                                   - Val Cys Val Cys Asp Glu Gly Phe Tyr Arg As - #n Lys Lys Gly Lys Cys         #    60                                                                       - Val Ala Lys Asp Val Cys Glu Asp Asp Asn Me - #t Glu Ile Ile Thr Phe         #80                                                                           - Pro Pro Glu                                                                 - (2) INFORMATION FOR SEQ ID NO:53:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      78 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:53:                                - Asp Lys Cys Gly Pro Asp Glu Trp Phe Asp Tr - #p Cys Gly Thr Tyr Lys         #                15                                                           - Gln Cys Glu Arg Lys Cys Asn Lys Glu Leu Se - #r Glu Lys Asp Glu Glu         #            30                                                               - Ala Cys Leu Ser Arg Ala Cys Thr Gly Arg Al - #a Cys Val Cys Asn Asp         #        45                                                                   - Gly Leu Tyr Arg Asp Asp Phe Gly Asn Cys Va - #l Glu Lys Asp Glu Cys         #    60                                                                       - Asn Asp Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Thr Lys His                 #75                                                                           - (2) INFORMATION FOR SEQ ID NO:54:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      78 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:54:                                - Asp Lys Cys Gly Pro Asp Glu Trp Phe Asp Tr - #p Cys Gly Thr Tyr Lys         #                15                                                           - Gln Cys Glu Arg Lys Cys Ser Glu Glu Leu Se - #r Glu Lys Asn Glu Glu         #            30                                                               - Ala Cys Leu Ser Arg Ala Cys Thr Gly Arg Al - #a Cys Val Cys Asn Asp         #        45                                                                   - Gly Leu Tyr Arg Asp Asp Phe Gly Asn Cys Va - #l Glu Lys Asp Glu Cys         #    60                                                                       - Asn Asp Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Thr Lys His                 #75                                                                           - (2) INFORMATION FOR SEQ ID NO:55:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      77 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:55:                                - Lys Cys Pro Thr Asp Glu Trp Phe Asp Trp Cy - #s Gly Thr Tyr Lys His         #                15                                                           - Cys Glu Leu Lys Cys Asp Arg Glu Leu Thr Gl - #u Lys Glu Glu Gln Ala         #            30                                                               - Cys Leu Ser Arg Val Cys Glu Lys Ser Ala Cy - #s Val Cys Asn Asp Gly         #        45                                                                   - Leu Tyr Arg Asp Lys Phe Gly Asn Cys Val Gl - #u Lys Asp Glu Cys Asn         #    60                                                                       - Asp Met Glu Ile Ile Thr Phe Ala Pro Glu Gl - #u Thr Lys                     #75                                                                           - (2) INFORMATION FOR SEQ ID NO:56:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      78 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:56:                                - Asp Glu Cys Gly Pro Asp Glu Trp Phe Asp Ty - #r Cys Gly Asn Tyr Lys         #                15                                                           - Lys Cys Glu Arg Lys Cys Ser Glu Glu Thr Se - #r Glu Lys Asn Glu Glu         #            30                                                               - Ala Cys Leu Ser Arg Ala Cys Thr Gly Arg Al - #a Cys Val Cys Lys Asp         #        45                                                                   - Gly Leu Tyr Arg Asp Asp Phe Gly Asn Cys Va - #l Pro His Asp Glu Cys         #    60                                                                       - Asn Asp Met Glu Ile Ile Thr Phe Pro Pro Gl - #u Thr Lys His                 #75                                                                           - (2) INFORMATION FOR SEQ ID NO:57:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      75 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:57:                                - Lys Ala Phe Pro Lys Cys Asp Val Asn Glu Ar - #g Phe Glu Val Cys Gly         #                15                                                           - Asn Leu Lys Glu Cys Glu Leu Lys Cys Asp Gl - #u Asp Pro Lys Ile Cys         #            30                                                               - Ser Arg Ala Cys Ile Arg Pro Pro Ala Cys Va - #l Cys Asp Asp Gly Phe         #        45                                                                   - Tyr Arg Asp Lys Tyr Gly Phe Cys Val Glu Gl - #u Asp Glu Cys Asn Asp         #    60                                                                       - Met Glu Ile Ile Thr Phe Pro Pro Glu Thr Ly - #s                             #75                                                                           - (2) INFORMATION FOR SEQ ID NO:58:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      77 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:58:                                - Arg Thr Val Lys Lys Cys Gly Lys Asn Glu Ar - #g Tyr Asp Asp Cys Gly         #                15                                                           - Asn Ala Lys Asp Cys Glu Thr Lys Cys Gly Gl - #u Glu Glu Lys Val Cys         #            30                                                               - Arg Ser Arg Glu Cys Thr Ser Pro Gly Ala Cy - #s Val Cys Glu Gln Gly         #        45                                                                   - Phe Tyr Arg Asp Pro Ala Gly Asp Cys Val Th - #r Asp Glu Glu Cys Asp         #    60                                                                       - Glu Trp Asn Asn Met Glu Ile Ile Thr Met Pr - #o Lys Gln                     #75                                                                           - (2) INFORMATION FOR SEQ ID NO:59:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      84 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:59:                                - Lys Ala Thr Met Gln Cys Gly Glu Asn Glu Ly - #s Tyr Asp Ser Cys Gly         #                15                                                           - Ser Lys Glu Cys Asp Lys Lys Cys Lys Tyr As - #p Gly Val Glu Glu Glu         #            30                                                               - Asp Asp Glu Glu Pro Asn Val Pro Cys Leu Va - #l Arg Val Cys His Gln         #        45                                                                   - Asp Cys Val Cys Glu Glu Gly Phe Tyr Arg As - #n Lys Asp Asp Lys Cys         #    60                                                                       - Val Ser Ala Glu Asp Cys Glu Leu Asp Asn Me - #t Asp Phe Ile Tyr Pro         #80                                                                           - Gly Thr Arg Asn                                                             - (2) INFORMATION FOR SEQ ID NO:60:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      58 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Heligmosomoides polygyrus                                               -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:60:                                - Lys Thr Cys Gly Pro Asn Glu Glu Tyr Thr Gl - #u Cys Gly Thr Pro Cys         #                15                                                           - Glu Pro Lys Cys Asn Glu Pro Met Pro Asp Il - #e Cys Thr Leu Asn Cys         #            30                                                               - Ile Val Asn Val Cys Gln Cys Lys Pro Gly Ph - #e Lys Arg Gly Pro Lys         #        45                                                                   - Gly Cys Val Ala Pro Gly Pro Gly Cys Lys                                     #    55                                                                       - (2) INFORMATION FOR SEQ ID NO:61:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      61 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Necator americanus                                                      -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:61:                                - Lys Arg Asp Cys Pro Ala Asn Glu Glu Trp Ar - #g Glu Cys Gly Thr Pro         #                15                                                           - Cys Glu Pro Lys Cys Asn Gln Pro Met Pro As - #p Ile Cys Thr Met Asn         #            30                                                               - Cys Ile Val Asp Val Cys Gln Cys Lys Glu Gl - #y Tyr Lys Arg His Glu         #        45                                                                   - Thr Lys Gly Cys Leu Lys Glu Gly Ser Ala As - #p Cys Lys                     #    60                                                                       - (2) INFORMATION FOR SEQ ID NO:62:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      171 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma ceylanicum                                                 -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:62:                                - Lys Pro Asn Asn Val Met Thr Asn Ala Cys Gl - #y Leu Asn Glu Tyr Phe         #                15                                                           - Ala Glu Cys Gly Asn Met Lys Glu Cys Glu Hi - #s Arg Cys Asn Glu Glu         #            30                                                               - Glu Asn Glu Glu Arg Asp Glu Glu Arg Ile Th - #r Ala Cys Leu Ile Arg         #        45                                                                   - Val Cys Phe Arg Pro Gly Ala Cys Val Cys Ly - #s Asp Gly Phe Tyr Arg         #    60                                                                       - Asn Arg Thr Gly Ser Cys Val Glu Glu Asp As - #p Cys Glu Tyr Glu Asn         #80                                                                           - Met Glu Phe Ile Thr Phe Ala Pro Glu Val Pr - #o Ile Cys Gly Ser Asn         #                95                                                           - Glu Arg Tyr Ser Asp Cys Gly Asn Asp Lys Gl - #n Cys Glu Arg Lys Cys         #           110                                                               - Asn Glu Asp Asp Tyr Glu Lys Gly Asp Glu Al - #a Cys Arg Ser His Val         #       125                                                                   - Cys Glu Arg Pro Gly Ala Cys Val Cys Glu As - #p Gly Phe Tyr Arg Asn         #   140                                                                       - Lys Lys Gly Ser Cys Val Glu Ser Asp Asp Cy - #s Glu Tyr Asp Asn Met         145                 1 - #50                 1 - #55                 1 -       #60                                                                           - Asp Phe Ile Thr Phe Ala Pro Glu Thr Ser Ar - #g                             #               170                                                           - (2) INFORMATION FOR SEQ ID NO:63:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      162 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:63:                                - Lys Ser Ala Lys Lys Cys Gly Leu Asn Glu Ly - #s Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Ala Cys Glu Lys Lys Cys Ser Asp Le - #u Asp Asn Glu Glu Asp         #            30                                                               - Tyr Lys Glu Glu Asp Glu Ser Lys Cys Arg Se - #r Arg Glu Cys Ser Arg         #        45                                                                   - Arg Val Cys Val Cys Asp Glu Gly Phe Tyr Ar - #g Asn Lys Lys Gly Gln         #    60                                                                       - Cys Val Thr Arg Asp Asp Cys Glu Tyr Asp As - #n Met Glu Ile Ile Thr         #80                                                                           - Phe Pro Pro Glu Asp Lys Cys Gly Pro Asp Gl - #u Trp Phe Asp Trp Cys         #                95                                                           - Gly Thr Tyr Lys Gln Cys Glu Arg Lys Cys As - #n Lys Glu Leu Ser Glu         #           110                                                               - Lys Asp Glu Glu Ala Cys Leu Ser Arg Ala Cy - #s Thr Gly Arg Ala Cys         #       125                                                                   - Val Cys Asn Asp Gly Leu Tyr Arg Asp Asp Ph - #e Gly Asn Cys Val Glu         #   140                                                                       - Lys Asp Glu Cys Asn Asp Met Glu Ile Ile Th - #r Phe Pro Pro Glu Thr         145                 1 - #50                 1 - #55                 1 -       #60                                                                           - Lys His                                                                     - (2) INFORMATION FOR SEQ ID NO:64:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      162 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:64:                                - Lys Ser Ala Lys Lys Cys Gly Leu Asn Glu Ly - #s Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Ala Cys Glu Lys Lys Cys Ser Asp Le - #u Asp Asn Glu Glu Asp         #            30                                                               - Tyr Gly Glu Glu Asp Glu Ser Lys Cys Arg Se - #r Arg Glu Cys Ile Gly         #        45                                                                   - Arg Val Cys Val Cys Asp Glu Gly Phe Tyr Ar - #g Asn Lys Lys Gly Gln         #    60                                                                       - Cys Val Thr Arg Asp Asp Cys Glu Tyr Asp As - #n Met Glu Ile Ile Thr         #80                                                                           - Phe Pro Pro Glu Asp Lys Cys Gly Pro Asp Gl - #u Trp Phe Asp Trp Cys         #                95                                                           - Gly Thr Tyr Lys Gln Cys Glu Arg Lys Cys Se - #r Glu Glu Leu Ser Glu         #           110                                                               - Lys Asn Glu Glu Ala Cys Leu Ser Arg Ala Cy - #s Thr Gly Arg Ala Cys         #       125                                                                   - Val Cys Asn Asp Gly Leu Tyr Arg Asp Asp Ph - #e Gly Asn Cys Val Glu         #   140                                                                       - Lys Asp Glu Cys Asn Asp Met Glu Ile Ile Th - #r Phe Pro Pro Glu Thr         145                 1 - #50                 1 - #55                 1 -       #60                                                                           - Lys His                                                                     - (2) INFORMATION FOR SEQ ID NO:65:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      161 amino acids                                                        #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma duodenale                                                  -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:65:                                - Lys Ala Ala Lys Lys Cys Gly Leu Asn Glu Ar - #g Leu Asp Cys Gly Asn         #                15                                                           - Leu Lys Gln Cys Glu Pro Lys Cys Ser Asp Le - #u Glu Ser Glu Glu Tyr         #            30                                                               - Glu Glu Glu Asp Glu Ser Lys Cys Arg Ser Ar - #g Glu Cys Ser Arg Arg         #        45                                                                   - Val Cys Val Cys Asp Glu Gly Phe Tyr Arg As - #n Lys Lys Gly Lys Cys         #    60                                                                       - Val Ala Lys Asp Val Cys Glu Asp Asp Asn Me - #t Glu Ile Ile Thr Phe         #80                                                                           - Pro Pro Glu Asp Glu Cys Gly Pro Asp Glu Tr - #p Phe Asp Tyr Cys Gly         #                95                                                           - Asn Tyr Lys Lys Cys Glu Arg Lys Cys Ser Gl - #u Glu Thr Ser Glu Lys         #           110                                                               - Asn Glu Glu Ala Cys Leu Ser Arg Ala Cys Th - #r Gly Arg Ala Cys Val         #       125                                                                   - Cys Lys Asp Gly Leu Tyr Arg Asp Asp Phe Gl - #y Asn Cys Val Pro His         #   140                                                                       - Asp Glu Cys Asn Asp Met Glu Ile Ile Thr Ph - #e Pro Pro Glu Thr Lys         145                 1 - #50                 1 - #55                 1 -       #60                                                                           - His                                                                         - (2) INFORMATION FOR SEQ ID NO:66:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9MATION:                                              #amino acid.   is an                                                          #66:  (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                         1                5                                                            - (2) INFORMATION FOR SEQ ID NO:   67:                                        -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 isION:                                              #acid.         an amino                                                       #67:  (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:68:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa at locations 1 and 2 is an amino                                                       acid, pro - #vided that at least one of Xaa                                   at locati - #ons 1 and 2 is Glu or Asp, Xaa                                   in locati - #ons 3 to 8 is an amino acid.                      -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:68:                                - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:69:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:69:                                - Gly Phe Tyr Arg Asp                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:70:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:70:                                - Gly Phe Tyr Arg Asn                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:71:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:71:                                - Gly Tyr Tyr Arg Asp                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:72:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:72:                                - Gly Tyr Tyr Arg Asn                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:73:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:73:                                - Gly Leu Tyr Arg Asp                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:74:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:74:                                - Glu Ile Ile His Val                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:75:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:75:                                - Asp Ile Ile Met Val                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:76:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      6 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:76:                                - Phe Ile Thr Phe Ala Pro                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:77:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:77:                                - Met Glu Ile Ile Thr                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:78:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 and 2 isON:                                              #acid, provided that at                                                                      least one - # Xaa is Glu or Asp.                               -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:78:                                - Xaa Xaa Gly Phe Tyr Arg Asp                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:79:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 and 2ATION:                                              #amino acid, provided                                                         #least one Xaa is Glu or                                                                     Asp.                                                           -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:79:                                - Xaa Xaa Gly Phe Tyr Arg Asn                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:80:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 and 2 is an amino                                                       acid, pro - #vided that at least one Xaa is                    #Asp.          Glu or                                                         -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:80:                                - Xaa Xaa Gly Tyr Tyr Arg Asp                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:81:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 and 2 is an amino                                                       acid, pro - #vided that at least one Xaa is                    #Asp.          Glu or                                                         -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:81:                                - Xaa Xaa Gly Tyr Tyr Arg Asn                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:82:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 and 2 is an amino                                                       acid, pro - #vided that at least one Xaa is                    #Asp.          Glu or                                                         -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:82:                                - Xaa Xaa Gly Leu Tyr Arg Asp                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:83:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 isION:                                              #acid.         an amino                                                       #83:  (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:84:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      4 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in location 1 is an amino:                                                             acid, pre - #ferably Leu; Xaa in                               #2 is an amino acid; Xaa                                                                     in locati - #on 3 is an amino acid,                            #Arg; Xaa in locationably                                                                    4 is a - #n amino acid.                                        -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:84:                                - Xaa Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:85:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      4 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  internal fragmentTYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in locations 1 to 4MATION:                                              #amino acid.   is an                                                          -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:85:                                - Xaa Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO: 86:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 isION:                                              #acid.         an amino                                                       #86:  (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:87:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 isION:                                              #acid.         an amino                                                       #87:  (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:88:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      25 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:88:                                #               25 TCAT GTTGG                                                 - (2) INFORMATION FOR SEQ ID NO:89:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      22 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:89:                                #                 22TGG TG                                                    - (2) INFORMATION FOR SEQ ID NO:90:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      21 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                           #for" stands for A or G; "N" stands                                                          any base; - # "Y" stands for C or T; and                       #stands for A or C.                                                           -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:90:                                #21                ARTG Y                                                     - (2) INFORMATION FOR SEQ ID NO:91:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      23 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                           #for" stands for A or T; "R" stands                                                          A or G - #; "N" stands for any base; and                       #stands for C or T.                                                           -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:91:                                #                23ANAC RCA                                                   - (2) INFORMATION FOR SEQ ID NO:92:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      13 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:92:                                - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p Leu Asp                     #                10                                                           - (2) INFORMATION FOR SEQ ID NO:93:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      11 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:93:                                - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p                             #                10                                                           - (2) INFORMATION FOR SEQ ID NO:94:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      33 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (ix) FEATURE:                                                           #for" stands for A or G; "N" stands                                           #and "Y" stands for C or T.                                                   -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:94:                                #         33       GYGG NGARAAYGAR TGG                                        - (2) INFORMATION FOR SEQ ID NO:95:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      28 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:95:                                #             28   TTTT TTTTTTTT                                              - (2) INFORMATION FOR SEQ ID NO:96:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      24 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:96:                                #                24GGAG CCCG                                                  - (2) INFORMATION FOR SEQ ID NO:97:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      20 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:97:                                - Lys Ala Tyr Pro Glu Cys Gly Glu Asn Glu Tr - #p Leu Asp Asp Cys Gly         Thr                                                                           #                 15                                                          - Gln Lys Pro                                                                          20                                                                   - (2) INFORMATION FOR SEQ ID NO:98:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      10 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:98:                                #        10                                                                   - (2) INFORMATION FOR SEQ ID NO:99:                                           -      (i) SEQUENCE CHARACTERISTICS:                                          #      18 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:99:                                #  18              GT                                                         - (2) INFORMATION FOR SEQ ID NO:100:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      18 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:100:                               #  18              GG                                                         - (2) INFORMATION FOR SEQ ID NO:101:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      24 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:101:                               #                24ACAC AGGA                                                  - (2) INFORMATION FOR SEQ ID NO:102:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      66 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:102:                               - ATGTTCTCTC CAATTTTGTC CTTGGAAATT ATTTTAGCTT TGGCTACTTT GC - #AATCTGTC         60                                                                          #           66                                                                - (2) INFORMATION FOR SEQ ID NO:103:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      57 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:103:                               - CAGCCAGGTA TCTCCACTAC CGTTGGTTCC GCTGCCGAGG GTTCTTTGGA CA - #AGAGG            57                                                                          - (2) INFORMATION FOR SEQ ID NO:104:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      51 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:104:                               #             51TTCAGAT CTGAATGCGG CCGCTCGAGA CTAGTGGATC C                    - (2) INFORMATION FOR SEQ ID NO:105:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      41 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:105:                               #   41             TCAG ACATGTATAA TCTCATGTTG G                               - (2) INFORMATION FOR SEQ ID NO:106:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:106:                               - Lys Ala Tyr Pro Glu                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:107:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      36 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:107:                               #       36         GAAG ATGCTTTACG CTATCG                                     - (2) INFORMATION FOR SEQ ID NO:108:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      23 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:108:                               #                23TCTC AAG                                                   - (2) INFORMATION FOR SEQ ID NO:109:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      9 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:109:                               - Arg Thr Val Arg Lys Ala Tyr Pro Glu                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:110:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      5 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     #  N-terminal fragmentPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:110:                               - Arg Thr Val Arg Lys                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:111:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      33 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:111:                               #         33       ACAT ACTGCGTAAT AAG                                        - (2) INFORMATION FOR SEQ ID NO:112:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      60 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:112:                               - TATGGGATGG CCGACTTGGC CTCCGCCTGA GCCTCCACCT TTATCCCAAT CC - #AAATAAGA         60                                                                          - (2) INFORMATION FOR SEQ ID NO:113:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      60 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:113:                               - ATGGGATGGC CGACTTGGCC CTCCGCCTGA GCCTCCACCT TTATCCCAAT CC - #AAATAAGA         60                                                                          - (2) INFORMATION FOR SEQ ID NO:114:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      60 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:114:                               - TATGGGATGG CCGACTTGGC CGATCCGCCT GAGCCTCCAC CTTTATCCCA AT - #CCAAATAA         60                                                                          - (2) INFORMATION FOR SEQ ID NO:115:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      45 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:115:                               #45                CCGC GTGATATGGG ATGGCCGACT TGGCC                           - (2) INFORMATION FOR SEQ ID NO:116:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      24 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:116:                               #                24GTCA CGAC                                                  - (2) INFORMATION FOR SEQ ID NO:117:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      28 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:117:                               #             28   TATA TAAAGTCC                                              - (2) INFORMATION FOR SEQ ID NO:118:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      7 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in location 5 is Arg, Pro or Lys.                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:118:                               - Lys Pro Cys Glu Xaa Lys Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:119:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      8 amino acids:                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (ix) FEATURE:                                                           # Xaa in location 2 is Val, Ile or Gln;                                       #location 4 is Lys, Asp, Glu or                                               #in location 5 is Asp or                                                      #in location 7 is Phe or                                                                     Tyr.                                                           -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:119:                               - Cys Xaa Cys Xaa Xaa Gly Xaa Tyr                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:120:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      44 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:120:                               # 44               CATG GCGGTGCTTT ATTCAGTAGC AATA                            - (2) INFORMATION FOR SEQ ID NO:121:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      40 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:121:                               #    40            CGTG AGGTTTCTGG TGCAAAAGTG                                 - (2) INFORMATION FOR SEQ ID NO:122:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      24 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:122:                               #                24GTGG TGAG                                                  - (2) INFORMATION FOR SEQ ID NO:123:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      47 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:123:                               #                47TCAG TTTCGAGTTC CGGGATATAT AAAGTCC                         - (2) INFORMATION FOR SEQ ID NO:124:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      30 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:124:                               #           30     TGTG GGATCAGAAG                                            - (2) INFORMATION FOR SEQ ID NO:125:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      33 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:125:                               #         33       GGTG CGAAAGTAAT AAA                                        - (2) INFORMATION FOR SEQ ID NO:126:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      28 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:126:                               #             28   TGCA GTGTGGTG                                              - (2) INFORMATION FOR SEQ ID NO:127:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      46 base pairs:                                                         #        nucleic acid                                                         #  single (C) STRANDEDNESS:                                                   #     linear) TOPOLOGY:                                                       -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:127:                               #                 46GGG TTTCGAGTTC CGGGATATAT AAAGTC                          - (2) INFORMATION FOR SEQ ID NO:128:                                          -      (i) SEQUENCE CHARACTERISTICS:                                          #      91 amino acids                                                         #        amino acid                                                           #     linear) TOPOLOGY:                                                       # peptide) MOLECULE TYPE:                                                     -     (vi) ORIGINAL SOURCE:                                                   #     Ancyclostoma caninum                                                    -     (xi) SEQUENCE DESCRIPTION: SEQ ID NO:128:                               - Leu Val Ser Tyr Cys Ser Gly Lys Ala Thr Me - #t Gln Cys Gly Glu Asn         #                15                                                           - Glu Lys Tyr Asp Ser Cys Gly Ser Lys Glu Cy - #s Asp Lys Lys Cys Lys         #            30                                                               - Tyr Asp Gly Val Glu Glu Glu Asp Asp Glu Gl - #u Pro Asn Val Pro Cys         #        45                                                                   - Leu Val Arg Val Cys His Gln Asp Cys Val Cy - #s Glu Glu Gly Phe Tyr         #     60                                                                      - Arg Asn Lys Asp Asp Lys Cys Val Ser Ala Gl - #u Asp Cys Glu Leu Asp         #805                                                                          - Asn Met Asp Phe Ile Tyr Pro Gly Thr Arg As - #n                             #                 90                                                          - (2) INFORMATION FOR SEQ ID NO:   129:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8MATION:                                              #amino acid.   is an                                                          #129: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   130:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6MATION:                                              #amino acid.   is an                                                          #130: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                 1                5                                                            - (2) INFORMATION FOR SEQ ID NO:   131:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5MATION:                                              #amino acid.   is an                                                          #131: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Cys                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   132:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4MATION:                                              #amino acid.   is an                                                          #132: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Cys                                                         1                5                                                            - (2) INFORMATION FOR SEQ ID NO:   133:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 and 3ATION:                                              #amino acid.   is an                                                          #133: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Cys                                                             - (2) INFORMATION FOR SEQ ID NO:   134:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #134: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   135:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #135: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   136:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #136: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   137:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #137: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   138:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #138: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   139:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #139: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   140:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #140: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   141:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #141: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   142:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #142: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   143:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #143: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   144:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #144: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   145:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 and 5:                                              #145: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   146:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 is an:                                                             amino aci - #d.                                                #146: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:  147:                                        -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #147: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   148:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #148: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   149:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #149: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   150:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #150: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   151:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 and locations                                                            4 to 1 - #5 is an amino acid.                                  #151: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                150                                                          - (2) INFORMATION FOR SEQ ID NO:   152:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 and locations                                                            4 to 1 - #4 is an amino acid.                                  #152: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   153:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 and locations                                                            4 to 1 - #3 is an amino acid.                                  #153: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   154:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7MATION:                                              #amino acid.   is an                                                          #154: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Cys                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   155:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6MATION:                                              #amino acid.   is an                                                          #155: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   156:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 isION:                                              #acid.         an amino                                                       #156: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   157:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #157: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   158:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #158: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Cys                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   159:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #159: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Cys                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   160:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 23 is an aminoions                                                                     acid.                                                          # 160:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   161:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 22 is an aminoions                                                                     acid.                                                          # 161:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   162:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 21 is an aminoions                                                                     acid.                                                          # 162:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   163:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 20 is an aminoions                                                                     acid.                                                          # 163:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   164:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 19 is an aminoions                                                                     acid.                                                          # 164:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   165:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 18 is an aminoions                                                                     acid.                                                          # 165:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   166:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 17 is an aminoions                                                                     acid.                                                          # 166:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   167:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 16 is an aminoions                                                                     acid.                                                          # 167:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   168:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 15 is an aminoions                                                                     acid.                                                          # 168:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   169:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 14 is an aminoions                                                                     acid.                                                          # 169:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   170:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 13 is an aminoions                                                                     acid.                                                          # 170:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   171:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 12 is an aminoions                                                                     acid.                                                          # 171:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   172:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 11 is an aminoions                                                                     acid.                                                          # 172:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   173:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 10 is an aminoions                                                                     acid.                                                          # 173:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   174:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #174: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   175:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #175: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   176:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #176: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   177:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #177: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   178:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #178: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   179:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 15 is an aminoions                                                                     acid.                                                          # 179:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                15                                                           - (2) INFORMATION FOR SEQ ID NO:   180:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 14 is an aminoions                                                                     acid.                                                          # 180:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                10                                                           - (2) INFORMATION FOR SEQ ID NO:   181:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 isION:                                              #acid.         an amino                                                       #181: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   182:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 isION:                                              #acid.         an amino                                                       #182: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   183:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #183: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   184:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    26 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 26 is an                                                             amino aci - #d.                                                #184: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   185:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    25 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 25 is an                                                             amino aci - #d.                                                #185: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                         #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   186:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    24 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 24 is an                                                             amino aci - #d.                                                #186: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   187:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 23 is an                                                             amino aci - #d.                                                #187: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   188:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 22 is an                                                             amino aci - #d.                                                #188: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   189:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 21 is an                                                             amino aci - #d.                                                #189: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   190:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 20 is an                                                             amino aci - #d.                                                #190: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   191:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 19 is an                                                             amino aci - #d.                                                #191: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   192:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 18 is an                                                             amino aci - #d.                                                #192: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   193:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 17 is an                                                             amino aci - #d.                                                #193: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   194:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 16 is an                                                             amino aci - #d.                                                #194: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   195:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 15 is an                                                             amino aci - #d.                                                #195: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   196:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 14 is an                                                             amino aci - #d.                                                #196: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   197:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 13 is an                                                             amino aci - #d.                                                #197: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   198:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 12 is an                                                             amino aci - #d.                                                #198: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   199:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 11 is an                                                             amino aci - #d.                                                #199: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   200:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 10 is an                                                             amino aci - #d.                                                #200: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   201:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 is an:                                                             amino aci - #d.                                                #201: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   202:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 is an:                                                             amino aci - #d.                                                #202: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   203:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 is an:                                                             amino aci - #d.                                                #203: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   204:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 is an:                                                             amino aci - #d.                                                #204: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   205:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8MATION:                                              #amino acid.   is an                                                          #205: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   206:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #206: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   207:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #207: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Cys                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   208:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #208: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Cys                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   209:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 23 is an aminoions                                                                     acid.                                                          # 209:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   210:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 22 is an aminoions                                                                     acid.                                                          # 210:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   211:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 21 is an aminoions                                                                     acid.                                                          # 211:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   212:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 20 is an aminoions                                                                     acid.                                                          # 212:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   213:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 19 is an aminoions                                                                     acid.                                                          # 213:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   214:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 18 is an aminoions                                                                     acid.                                                          # 214:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   215:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 17 is an aminoions                                                                     acid.                                                          # 215:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   216:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 16 is an aminoions                                                                     acid.                                                          # 216:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   217:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 15 is an aminoions                                                                     acid.                                                          # 217:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   218:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 14 is an aminoions                                                                     acid.                                                          # 218:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   219:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 13 is an aminoions                                                                     acid.                                                          # 219:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   220:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 12 is an aminoions                                                                     acid.                                                          # 220:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   221:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 11 is an aminoions                                                                     acid.                                                          # 221:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   222:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 10 is an aminoions                                                                     acid.                                                          # 222:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   223:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #223: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   224:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #224: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   225:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #225: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   226:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #226: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   227:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #227: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   228:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 15 is an aminoions                                                                     acid.                                                          # 228:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                15                                                           - (2) INFORMATION FOR SEQ ID NO:   229:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 14 is an aminoions                                                                     acid.                                                          # 229:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                10                                                           - (2) INFORMATION FOR SEQ ID NO:   230:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 isION:                                              #acid.         an amino                                                       #230: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   231:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 isION:                                              #acid.         an amino                                                       #231: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   232:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #232: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   233:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    26 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 26 is an                                                             amino aci - #d.                                                #233: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   234:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    25 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 25 is an                                                             amino aci - #d.                                                #234: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                         #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   235:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    24 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 24 is an                                                             amino aci - #d.                                                #235: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   236:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 23 is an                                                             amino aci - #d.                                                #236: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   237:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 22 is an                                                             amino aci - #d.                                                #237: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   238:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 21 is an                                                             amino aci - #d.                                                #238: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   239:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 20 is an                                                             amino aci - #d.                                                #239: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   240:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 19 is an                                                             amino aci - #d.                                                #240: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   241:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 18 is an                                                             amino aci - #d.                                                #241: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   242:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 17 is an                                                             amino aci - #d.                                                #242: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   243:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 16 is an                                                             amino aci - #d.                                                #243: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   244:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 15 is an                                                             amino aci - #d.                                                #244: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   245:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 14 is an                                                             amino aci - #d.                                                #245: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   246:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 13 is an                                                             amino aci - #d.                                                #246: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   247:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 12 is an                                                             amino aci - #d.                                                #247: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   248:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 11 is an                                                             amino aci - #d.                                                #248: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   249:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 10 is an                                                             amino aci - #d.                                                #249: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   250:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 is an:                                                             amino aci - #d.                                                #250: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   251:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 is an:                                                             amino aci - #d.                                                #251: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   252:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 is an:                                                             amino aci - #d.                                                #252: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   253:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 is an:                                                             amino aci - #d.                                                #253: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   254:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8MATION:                                              #amino acid.   is an                                                          #254: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   255:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #255: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   256:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #256: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Cys                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   257:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #257: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Cys                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   258:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 23 is an aminoions                                                                     acid.                                                          # 258:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   259:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 22 is an aminoions                                                                     acid.                                                          # 259:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   260:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 21 is an aminoions                                                                     acid.                                                          # 260:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   261:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 20 is an aminoions                                                                     acid.                                                          # 261:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   262:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 19 is an aminoions                                                                     acid.                                                          # 262:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   263:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 18 is an aminoions                                                                     acid.                                                          # 263:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   264:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 17 is an aminoions                                                                     acid.                                                          # 264:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   265:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 16 is an aminoions                                                                     acid.                                                          # 265:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   266:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 15 is an aminoions                                                                     acid.                                                          # 266:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   267:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 14 is an aminoions                                                                     acid.                                                          # 267:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   268:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 13 is an aminoions                                                                     acid.                                                          # 268:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   269:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 12 is an aminoions                                                                     acid.                                                          # 269:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   270:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 11 is an aminoions                                                                     acid.                                                          # 270:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   271:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 10 is an aminoions                                                                     acid.                                                          # 271:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   272:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #272: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   273:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #273: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   274:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #274: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   275:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #275: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   276:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #276: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   277:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 15 is an aminoions                                                                     acid.                                                          # 277:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                15                                                           - (2) INFORMATION FOR SEQ ID NO:   278:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 14 is an aminoions                                                                     acid.                                                          # 278:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                10                                                           - (2) INFORMATION FOR SEQ ID NO:   279:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 13 is an aminoions                                                                     acid.                                                          # 279:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                10                                                           - (2) INFORMATION FOR SEQ ID NO:   280:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 isION:                                              #acid.         an amino                                                       #280: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   281:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 isION:                                              #acid.         an amino                                                       #281: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   282:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #282: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   283:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    26 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 26 is an                                                             amino aci - #d.                                                #283: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   284:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    25 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 25 is an                                                             amino aci - #d.                                                #284: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                         #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   285:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    24 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 24 is an                                                             amino aci - #d.                                                #285: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   286:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 23 is an                                                             amino aci - #d.                                                #286: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   287:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 22 is an                                                             amino aci - #d.                                                #287: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   288:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 21 is an                                                             amino aci - #d.                                                #288: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   289:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 20 is an                                                             amino aci - #d.                                                #289: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   290:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 19 is an                                                             amino aci - #d.                                                #290: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   291:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 18 is an                                                             amino aci - #d.                                                #291: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   292:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 17 is an                                                             amino aci - #d.                                                #292: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   293:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 16 is an                                                             amino aci - #d.                                                #293: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   294:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 15 is an                                                             amino aci - #d.                                                #294: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   295:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 14 is an                                                             amino aci - #d.                                                #295: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   296:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 13 is an                                                             amino aci - #d.                                                #296: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   297:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 12 is an                                                             amino aci - #d.                                                #297: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   298:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 11 is an                                                             amino aci - #d.                                                #298: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   299:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 10 is an                                                             amino aci - #d.                                                #299: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   300:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 is an:                                                             amino aci - #d.                                                #300: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   301:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 is an:                                                             amino aci - #d.                                                #301: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   302:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 is an:                                                             amino aci - #d.                                                #302: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   303:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 is an:                                                             amino aci - #d.                                                #303: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   304:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 is an:                                                             amino aci - #d.                                                #304: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   305:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 is an:                                                             amino aci - #d.                                                #305: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   306:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    3 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 and 3 is an:                                                             amino aci - #d.                                                #306: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa                                                                  1                                                                            - (2) INFORMATION FOR SEQ ID NO:   307:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    2 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 is anMATION:                                                             amino aci - #d.                                                #307: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa                                                                      1                                                                            - (2) INFORMATION FOR SEQ ID NO:   308:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8MATION:                                              #amino acid.   is an                                                          #308: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   309:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #309: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Cys                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   310:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #310: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Cys                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   311:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #311: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Cys                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   312:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 23 is an aminoions                                                                     acid.                                                          # 312:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   313:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 22 is an aminoions                                                                     acid.                                                          # 313:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   314:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 21 is an aminoions                                                                     acid.                                                          # 314:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   315:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 20 is an aminoions                                                                     acid.                                                          # 315:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   316:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 19 is an aminoions                                                                     acid.                                                          # 316:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   317:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 18 is an aminoions                                                                     acid.                                                          # 317:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   318:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 17 is an aminoions                                                                     acid.                                                          # 318:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   319:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 16 is an aminoions                                                                     acid.                                                          # 319:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   320:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 15 is an aminoions                                                                     acid.                                                          # 320:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   321:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 14 is an aminoions                                                                     acid.                                                          # 321:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   322:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 13 is an aminoions                                                                     acid.                                                          # 322:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   323:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 12 is an aminoions                                                                     acid.                                                          # 323:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   324:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 11 is an aminoions                                                                     acid.                                                          # 324:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   325:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 1 to 3 andON:                                              #5 to 10 is an aminoions                                                                     acid.                                                          # 325:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Xaa Xaa Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   326:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #326: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   327:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #327: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   328:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #328: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   329:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    5 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 5 isION:                                              #acid.         an amino                                                       #329: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa                                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   330:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    4 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 4 isION:                                              #acid.         an amino                                                       #330: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa                                                              1                                                                            - (2) INFORMATION FOR SEQ ID NO:   331:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 15 is an aminoions                                                                     acid.                                                          # 331:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                15                                                           - (2) INFORMATION FOR SEQ ID NO:   332:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in location 2 andORMATION:                                              #4 to 14 is an aminoions                                                                     acid.                                                          # 332:(xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                10                                                           - (2) INFORMATION FOR SEQ ID NO:   333:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 isION:                                              #acid.         an amino                                                       #333: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   334:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 isION:                                              #acid.         an amino                                                       #334: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   335:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 isION:                                              #acid.         an amino                                                       #335: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   336:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    26 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 26 is an                                                             amino aci - #d.                                                #336: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   337:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    25 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 25 is an                                                             amino aci - #d.                                                #337: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                         #             25                                                              - (2) INFORMATION FOR SEQ ID NO:   338:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    24 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 24 is an                                                             amino aci - #d.                                                #338: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   339:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    23 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 23 is an                                                             amino aci - #d.                                                #339: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                                              20                                                               - (2) INFORMATION FOR SEQ ID NO:   340:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    22 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 22 is an                                                             amino aci - #d.                                                #340: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa Xaa                                                                  20                                                               - (2) INFORMATION FOR SEQ ID NO:   341:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    21 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 21 is an                                                             amino aci - #d.                                                #341: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa Xaa                                                                      20                                                               - (2) INFORMATION FOR SEQ ID NO:   342:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    20 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 20 is an                                                             amino aci - #d.                                                #342: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa Xaa                                                                          20                                                               - (2) INFORMATION FOR SEQ ID NO:   343:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    19 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 19 is an                                                             amino aci - #d.                                                #343: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa Xaa                                                                 - (2) INFORMATION FOR SEQ ID NO:   344:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    18 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 18 is an                                                             amino aci - #d.                                                #344: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa Xaa                                                                     - (2) INFORMATION FOR SEQ ID NO:   345:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    17 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 17 is an                                                             amino aci - #d.                                                #345: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - Xaa                                                                         - (2) INFORMATION FOR SEQ ID NO:   346:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    16 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 16 is an                                                             amino aci - #d.                                                #346: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa Xaa         #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   347:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    15 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 15 is an                                                             amino aci - #d.                                                #347: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa Xaa             #                 15                                                          - (2) INFORMATION FOR SEQ ID NO:   348:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    14 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 14 is an                                                             amino aci - #d.                                                #348: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa Xaa                 #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   349:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    13 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 13 is an                                                             amino aci - #d.                                                #349: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa Xaa                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   350:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    12 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 12 is an                                                             amino aci - #d.                                                #350: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a Xaa                         #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   351:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    11 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 11 is an                                                             amino aci - #d.                                                #351: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xa - #a                             #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   352:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    10 amino acidsH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 10 is an                                                             amino aci - #d.                                                #352: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                     #                 10                                                          - (2) INFORMATION FOR SEQ ID NO:   353:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    9 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 9 is an:                                                             amino aci - #d.                                                #353: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                          1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   354:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    8 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 8 is an:                                                             amino aci - #d.                                                #354: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa Xaa                                              1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   355:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    7 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 7 is an:                                                             amino aci - #d.                                                #355: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa Xaa                                                  1               5                                                            - (2) INFORMATION FOR SEQ ID NO:   356:                                       -      (i) SEQUENCE CHARACTERISTICS:                                          #    6 amino acidsTH:                                                         #      amino acidE:                                                           #   linear(D) TOPOLOGY:                                                       -      (v) FRAGMENT TYPE:  internal fragment                                  -     (ix) FEATURE:                                                           # Xaa in locations 2 to 6 is an:                                                             amino aci - #d.                                                #356: (xi) SEQUENCE DESCRIPTION: SEQ ID NO:                                   - Cys Xaa Xaa Xaa Xaa Xaa                                                      1               5                                                            __________________________________________________________________________

We claim:
 1. An isolated protein having anticoagulant activity, including factor Xa inhibitory activity, and having one or more NAP domains, where each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10 (Formula II), wherein(a) A1 is an amino acid sequence of 7 to 8 amino acid residues; (b) A2 is an amino acid sequence; (c) A3 is an amino acid sequence of 3 amino acid residues; (d) A4 is an amino acid sequence; (e) A5 is an amino acid sequence of 3 to 4 amino acid residues; (f) A6 is an amino acid sequence; (g) A7 is an amino acid residue; (h) A8 is an amino acid sequence of 11 to 12 amino acid residues; (i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and (j) A10 is an amino acid sequence;wherein each A2, A4, A6 and A10 has an independently selected number of independently selected amino acid residues and each sequence is selected such that each NAP domain has in total less than about 120 amino acid residues and wherein said NAP domain includes the amino acid sequence: Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ.ID.NOS. 67 and 156; (b) Cys-A2-Cys is selected from one of SEQ.ID.NOS. 157 to 159; (c) A3-Cys-A4 is selected from one of SEQ.ID.NOS. 160 to 173; (d) Cys-A5 is selected from SEQ.ID.NOS. 174 and 175; (e) Cys-A6 is selected from one of SEQ.ID.NOS. 176 to 178; (f) Cys-A7-Cys-A8 is selected from SEQ.ID.NOS. 179 and 180; (g) Cys-A9 is selected from one of SEQ.ID.NOS. 181 to 183; and (h) Cys-A10 is selected from one of SEQ.ID.NOS. 184 to
 204. 2. An isolated protein having anticoagulant activity, including factor VIIa/TF inhibitory activity, and having one or more NAP domains wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10 (FORMULA III), wherein (a) A1 is an amino acid sequence of 7 to 8 amino acid residues; (b) A2 is an amino acid sequence; (c) A3 is an amino acid sequence of 3 amino acid residues; (d) A4 is an amino acid sequence; (e) A5 is an amino acid sequence of 3 to 4 amino acid residues; (f) A6 is an amino acid sequence; (g) A7 is an amino acid residue; (h) A8 is an amino acid sequence of 11 to 12 amino acid residues; (i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and (j) A10 is an amino acid sequence;wherein each of A2, A4, A6 and A10 has an independently selected number of independently selected amino acid residues and each sequence is selected such that each NAP domain has in total less than about 120 amino acid residues, and wherein said NAP domain includes the amino acid sequence: Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10wherein (a) Cys-A1 is selected from SEQ.ID.NOS. 83 and 205; (b) Cys-A2-Cys is selected from one of SEQ.ID.NOS. 206 to 208; (c) A3-Cys-A4 is selected from one of SEQ.ID.NOS. 209 to 222; (d) Cys-A5 is selected from SEQ.ID.NOS. 223 and 224; (e) Cys-A6 is selected from one of SEQ.ID.NOS. 225 to 227; (f) Cys-A7-Cys-A8 is selected from one of SEQ.ID.NOS. 228 to 229; (g) Cys-A9 is selected from one of SEQ.ID.NOS. 230 to 232; and (h) Cys-A10 is selected from one of SEQ.ID.NOS. 233 to
 253. 3. An isolated protein having serine protease inhibitory activity and having one or more NAP domains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10 (FORMULA IV), wherein(a) A1 is an amino acid sequence of 7 to 8 amino acid residues; (b) A2 is an amino acid sequence; (c) A3 is an amino acid sequence of 3 amino acid residues; (d) A4 is an amino acid sequence; (e) A5 is an amino acid sequence of 3 to 4 amino acid residues; (f) A6 is an amino acid sequence; (g) A7 is an amino acid residue; (h) A8 is an amino acid sequence of 10 to 12 amino acid residues; (i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and (j) A10 is an amino acid sequence;wherein each of A2, A4, A6 and A10 has an independently selected number of independently selected amino acid residues and each sequence is selected such that each NAP domain has in total less than about 120 amino acid residues, and wherein said NAP domain includes the amino acid sequence: Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10, wherein(a) Cys-A1 is selected from SEQ.ID.NOS. 86 and 254; (b) Cys-A2-Cys is selected from one of SEQ.ID.NOS. 255 to 257; (c) A3-Cys-A4 is selected from one of SEQ.ID.NOS. 258 to 271; (d) Cys-A5 is selected from SEQ.ID.NOS. 272 and 273; (e) Cys-A6 is selected from SEQ.ID.NOS. 274 to 276; (f) Cys-A7-Cys-A8 is selected from one of SEQ.ID.NOS. 277 to 279; (g) Cys-A9 is selected from one of SEQ.ID.NOS. 280 to 282; and (h) Cys-A10 is selected from one of SEQ.ID.NOS. 283 to
 307. 4. The protein of claim 3, wherein(a) A3 is selected from the group consisting ofGlu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys, and Glu-Thr-Lys; (b) A4 is an amino acid sequence having a net anionic charge; (c) A7 is Val or Ile; (d) A8 includes an amino acid sequence selected from the group consisting ofA8_(a) -A8_(b) -Gly-Phe-Tyr-Arg-Asp [SEQ. ID. NO. 78], A8_(a) -A8_(b) -Gly-Phe-Tyr-Arg-Asn [SEQ. ID. NO. 79], A8_(a) -A8_(b) -Gly-Tyr-Tyr-Arg-Asp [SEQ. ID. NO. 80], A8_(a) -A8_(b) -Gly-Tyr-Tyr-Arg-Asn [SEQ. ID. NO. 81], and A8_(a) -A8_(b) -Gly-Leu-Tyr-Arg-Asp [SEQ. ID. NO. 82],wherein at least one of A⁸ _(a) and A8_(b) is Glu or Asp; (e) A9 is an amino acid sequence of five amino acid residues; and (f) A10 includes an amino acid sequence selected from the group consisting ofGlu-Ile-Ile-His-Val [SEQ. ID. NO. 74], Asp-Ile-Ile-Met-Val [SEQ. ID. NO. 75], Phe-Ile-Thr-Phe-Ala-Pro [SEQ. ID. NO. 76], and Met-Glu-Ile-Ile-Thr [SEQ. ID. NO. 77].
 5. The protein of claim 4 having a NAP domain substantiallly the same as a NAP domain selected from the group consisting of AcaNAP5 [SEQ. ID. NO. 40], AcaNAP6 [SEQ. ID. NO. 41], AcaNAP48 [SEQ. ID. NO. 42], AcaNAP23 [SEQ. ID. NO. 43], AcaNAP24 [SEQ. ID. NO. 44], AcaNAP25 [SEQ. ID. NO. 45], AcaNAP44 [SEQ. ID. NO. 46], AcaNAP31 [SEQ. ID. NO. 47], AceNAP4 [SEQ. ID. NO. 48 or 49], AcaNAP45 [SEQ. ID. NO. 50 or 53], AcaNAP47 [SEQ. ID. NO. 51 or 54], AduNAP7 [SEQ. ID. NO. 52 or 56], AduNAP4 [SEQ. ID. NO. 55], AceNAP5 [SEQ. ID. NO. 57], and AceNAP7 [SEQ. ID. NO. 58].
 6. An isolated protein having anticoagulant activity and having one or more NAP domains, wherein each NAP domain includes the sequence:Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10 (FORMULA V), wherein(a) A1 is an amino acid sequence of 7 to 8 amino acid residues; (b) A2 is an amino acid sequence; (c) A3 is an amino acid sequence of 3 amino acid residues; (d) A4 is an amino acid sequence; (e) A5 is an amino acid sequence of 3 to 4 amino acid residues; (f) A6 is an amino acid sequence; (g) A7 is an amino acid residue: (h) A8 is an amino acid sequence of 11 to 12 amino acid residues; (i) A9 is an amino acid sequence of 5 to 7 amino acid residues; and (j) A10 is an amino acid sequence;wherein each A2, A4, A6 and A10 has an independently selected number of independently selected amino acid residues and each sequence is selected such that each NAP domain has in total less than about 120 amino acid residues, and wherein said NAP domain includes the amino acid sequence: Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys-A10,wherein (a) Cys-A1 is selected from SEQ.ID.NOS. 87 and 308; (b) Cys-A2-Cys is selected from one of SEQ.ID.NOS. 309 to 311; (c) A3-Cys-A4 is selected from one of SEQ.ID.NOS. 312 to 325; (d) Cys-A5 is selected from SEQ.ID.NOS. 326 and 327; (e) Cys-A6 is selected from one of SEQ.ID.NOS. 328 to 330; (f) Cys-A7-Cys-A8 is selected from SEQ.ID.NOS. 331 to 332; (g) Cys-A9 is selected from one of SEQ.ID.NOS. 333 to 335; and (h) Cys-A10 is selected from one of SEQ.ID.NOS. 336 to
 356. 7. An isolated protein of claim 1 wherein A3 has the sequence Glu-A3_(a) -A3_(b) wherein A³ _(a) and A3_(b) are independently selected amino acid residues.
 8. An isolated protein of claim 7 where A3_(a) is selected from Ala, Arg, Pro, Lys, Ile, His, Leu and Thr and A3_(b) is selected from Lys, Thr and Arg.
 9. An isolated protein of claim 8 wherein A3 is selected from the group consisting of Glu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys and Glu-Thr-Lys.
 10. An isolated protein of claim 1 wherein A4 is an amino acid sequence having a net anionic charge.
 11. An isolated protein of claim 1 wherein A7 is Val or Ile.
 12. An isolated protein of claim 1 wherein A8 includes the amino acid sequence: A8_(a) -A8_(b) -A8_(c) -A8_(d) -A8_(e) -A8_(f) -A8_(g) (SEQ. ID. NO. 68) wherein(a) A8_(a) is the first amino acid residue in A8; and (b) at least one of A8_(a) and A8_(b) is selected from Glu and Asp; and (c) A8_(c) through A⁸ _(g) are independently selected amino acid residues.
 13. An isolated protein of claim 12 wherein(a) A8_(c) is Gly; (b) A8_(d) is selected from Phe, Tyr and Leu; (c) A8_(e) is Tyr; (d) A8_(f) is Arg; and (e) A8_(g) is Asp or Asn.
 14. An isolated protein of claim 13 wherein A8_(c) -A8_(d) -A8_(f) -A8_(g) is selected from one of SEQ. ID. NOS. 69 to
 73. 15. An isolated protein of claim 1 wherein A10 includes an amino acid sequence selected from one of SEQ. ID. NOS. 74 TO
 77. 16. An isolated protein of claim 15 wherein A10 includes SEQ. ID. NO.
 74. 17. An isolated protein according to claim 1 wherein(a) A3 has the amino acid sequence Glu-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues; (b) A4 is an amino acid sequence having a net anionic charge; (c) A7 is selected from Val and Ile; (d) A8 includes an amino acid sequence selected from one of SEQ. ID. NOS. 69 to 73; and (e) A10 includes an amino acid sequence selected from one of SEQ. ID. NOS. 74 to
 77. 18. An isolated protein according to claim 17 having one or two NAP domains.
 19. An isolated protein according to claim 17 having one NAP domain.
 20. An isolated protein of claim 1 wherein(a) A3 is selected from the group consisting of Glu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys and Glu-Thr-Lys; (b) A4 is an amino acid sequence having a net anionic charge; (c) A7 is Val or Ile; (d) A8 includes an amino acid sequence selected from one of SEQ. ID. NOS. 78 to 82; (e) A9 is an amino acid sequence of five amino acid residues; and (f) A10 includes an amino acid sequence selected from one of SEQ. ID. NOS. 74 to
 77. 21. An isolated protein of claim 20 having one or two NAP domains.
 22. An isolated protein of claim 20 having one NAP domain.
 23. An isolated protein of claim 2 wherein A3 has the amino acid sequence Asp-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues.
 24. An isolated protein of claim 23 wherein A3 is Asp-Lys-Lys.
 25. An isolated protein of claim 2 wherein A4 is an amino acid sequence having a net anionic charge.
 26. An isolated protein according to claim 2 wherein A5 is A5_(a) -A5_(b) -A5_(c) -A5_(d) (SEQ. ID. NO. 84) and wherein A5_(a) through A5_(b) are independently selected amino acid residues.
 27. An isolated protein according to claim 26 wherein A5_(a) is Leu and A5_(c) is Arg.
 28. An isolated protein according to claim 2 wherein A7 is Val or Ile.
 29. An isolated protein according to claim 28 wherein A7 is Val.
 30. An isolated protein according to claim 2 wherein A8 includes the amino acid sequence A8_(a) -A8_(b) -A8_(c) -A8_(d) -A8_(e) -A8_(f) -A8_(g) (SEQ. ID. NO. 68) wherein(a) A8_(a) is the first amino acid residue in A8; (b) at least one of A8_(a) and A8_(b) is selected from Glu and Asp; and (c) A8_(c) through A⁸ _(g) are independently selected amino acid residues.
 31. An isolated protein according to claim 30 wherein(a) A8_(c) is Gly; (b) A8_(d) is selected from Phe, Tyr and Leu; (c) A8_(e) is Tyr; (d) A8_(f) is Arg; and (e) A⁸ _(g) is selected from Asp and Asn.
 32. An isolated protein according to claim 31 wherein A8_(c) -A8_(d) -A8_(e) -A8_(f) -A8_(g) is SEQ. ID. NO.
 70. 33. An isolated protein of claim 2 wherein(a) A3 has the amino acid sequence Asp-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues; (b) A4 is an amino acid sequence having a net anionic charge; (c) A5 has the amino acid sequence A5_(a) -A5_(b) -A5_(c) -A5_(d) (SEQ. ID. NO. 85) wherein A5_(a) through A5_(d) are independently selected amino acid residues; and (d) A7 is selected from Val and Ile.
 34. An isolated protein of claim 33 having one or two NAP domains.
 35. An isolated protein of claim 33 having one NAP domain.
 36. An isolated protein of claim 2 in wherein(a) A3 is Asp-Lys-Lys; (b) A4 is an amino acid sequence having a net anionic charge; (c) A5 has the amino acid sequence A5_(a) -A5_(b) -A5_(c) -A5_(d) (SEQ. ID. NO. 85) wherein A5_(a) through A5_(d) are independently selected amino acid residues; (d) A7 is Val; and (e) A8 includes the amino acid sequence A8_(a) -A8_(b) -Gly-Phe-Tyr-Arg-Asn (SEQ. ID. NO. 79) wherein at least one of A8_(a) and A8_(b) is Glu or Asp.
 37. An isolated protein of claim 36 having one or two NAP domains.
 38. An isolated protein of claim 36 having one NAP domain.
 39. An isolated protein of claim 3 wherein A3 has the amino acid sequence Glu-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues.
 40. An isolated protein of claim 39 wherein A3 is Glu-Pro-Lys.
 41. An isolated protein of claim 3 wherein A4 has a net anionic charge.
 42. An isolated protein of claim 3 wherein A5 has the amino acid sequence A5_(a) -A5_(b) -A5_(c) wherein A⁵ _(a) through A5_(c) are independently selected amino acid residues.
 43. An isolated protein of claim 42 wherein A⁵ _(a) is Thr and A5_(c) is Asn.
 44. An isolated protein of claim 43 wherein A5 is Thr-Leu-Asn or Thr-Met-Asn.
 45. An isolated protein of claim 3 wherein A7 is Glu.
 46. An isolated protein of claim 3 wherein(a) A3 has the sequence of Glu-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues; (b) A4 is an amino acid sequence having a net anionic charge; (c) A5 has the sequence A5_(a) -A5_(b) -A5_(c) wherein A5_(a) to A5_(c) are independently selected amino acid residues; and (d) A7 is Glu.
 47. An isolated protein of claim 46 having one or two NAP domains.
 48. An isolated protein of claim 46 having one NAP domain.
 49. An isolated protein of claim 3 wherein(a) A3 is Glu-Pro-Lys; (b) A4 is an amino acid sequence having a net anionic charge; (c) A5 is selected from Thr-Leu-Asn and Thr-Met-Asn; and (d) A7 is Glu.
 50. An isolated protein of claim 49 having one or two NAP domains.
 51. An isolated protein of claim 49 having one NAP domain.
 52. An isolated protein of claim 6 wherein A3 has the sequence Glu-A3_(a) -A3_(b) wherein A3_(a) and A3_(b) are independently selected amino acid residues.
 53. An isolated protein of claim 52 wherein A3_(a) is selected from Ala, Arg, Pro, Lys, Ile, His, Leu and Thr and A3_(b) is selected from Lys, Thr and Arg.
 54. An isolated protein of claim 53 wherein A3 is selected from Glu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys and Glu-Thr-Lys.
 55. An isolated protein of claim 6 wherein A4 is an amino acid sequence having a net anionic charge.
 56. An isolated protein of claim 6 wherein A7 is Val or Ile.
 57. An isolated protein of claim 6 wherein A8 includes the amino acid sequence A8_(a) -A8_(b) -A8_(c) -A8_(d) -A8_(e) -A8_(f) -A8_(g) (SEQ. ID. NO. 68) wherein(a) A8_(a) is the first amino acid in A8; (b) at least one of A8_(a) and A8_(b) is selected from Glu and Asp; and (c) A8_(c) and A8_(g) are independently selected amino acid residues.
 58. An isolated protein of claim 57 wherein(a) A8_(c) is Gly; (b) A8_(d) is selected from Phe, Tyr and Leu; (c) A8_(e) is Tyr; (d) A8_(f) is Arg; and (e) A8_(g) is selected from Asp and Asn.
 59. An isolated protein of claim 58 wherein A8_(c) -A8_(d) -A8_(e) -A8_(f) -A8_(g) is selected from SEQ. ID. NOS. 69 to
 73. 60. An isolated protein of claim 6 wherein A10 includes an amino acid sequence selected from SEQ. ID. NOS. 74 to
 77. 61. An isolated protein of claim 6 wherein(a) A3 has the amino acid sequence Glu-A3_(a) -A3_(b) wherein A³ _(a) and A3_(b) are independently selected amino acid residues; (b) A4 is an amino acid sequence having a net anionic charge; (c) A7 is selected from Val and Ile; (d) A8 includes an amino acid sequence selected from SEQ. ID. NOS. 69 to 73; and (e) A10 includes an amino acid sequence selected from SEQ. ID. NOS. 74 to 77).
 62. An isolated protein of claim 61 having one or two NAP domains.
 63. An isolated protein of claim 61 having one NAP domain.
 64. An isolated protein of claim 61 having two NAP domains.
 65. An isolated protein of claim 6 wherein(a) A3 is selected from Glu-Ala-Lys, Glu-Arg-Lys, Glu-Pro-Lys, Glu-Lys-Lys, Glu-Ile-Thr, Glu-His-Arg, Glu-Leu-Lys and Glu-Thr-Lys; (b) A4 is an amino acid sequence having a net anionic charge; (c) A7 is Val or Ile; (d) A8 includes an amino acid sequence selected one of SEQ. ID. NOS. 78 to 82; (e) A9 is an amino acid sequence having five amino acid residues; and (f) A10 includes an amino acid sequence selected from one of SEQ. ID. NOS. 74 to
 77. 66. An isolated protein of claim 65 having one or two NAP domains.
 67. An isolated protein of claim 65 having one NAP domain.
 68. An isolated protein of claim 65 having two NAP domains.
 69. An isolated protein having anticoagulant and/or serine protease inhibitory activity and having one or more NAP domains, wherein each NAP domain includes the sequence Cys-A₁ -Cys-A₂ -Cys-A₃ -Cys-A₄ -Cys-A₅ -Cys-A₆ -Cys-A₇ -Cys-A₈ -Cys-A₉ -Cys (FORMULA I), wherein(a) A₁ is an amino acid sequence containing 7 to 8 amino acid residues; (b) A₂ is an amino acid sequence containing 2 to 5 amino acid residues; (c) A₃ is an amino acid sequence containing 3 amino acid residues; (d) A₄ is an amino acid sequence containing 6 to 7 amino acid residues; (e) A₅ is an amino acid sequence containing 3 to 4 amino acid residues; (f) A₆ is an amino acid sequence containing 3 to 5 amino acid residues; (g) A₇ is an amino acid residue; (h) A₈ is an amino acid sequence containing 10 to 12 amino acid residues; and (i) A₉ is an amino acid sequence containing 5 to 6 amino acid residues; and wherein said NAP domain includes the amino acid sequence Cys-A1-Cys-A2-Cys-A3-Cys-A4-Cys-A5-Cys-A6-Cys-A7-Cys-A8-Cys-A9-Cys, wherein (a) Cys-A1 is selected from SEQ. ID. NOS. 66 and 129; (b) Cys-A2-Cys is selected from one of SEQ. ID. NOS. 130 to 133; (c) A3-Cys-A4 is selected from one of SEQ. ID. NOS. 134 to 145; (d) Cys-A5 is selected from one of SEQ. ID. NOS. 146 and 147; (e) Cy-A6 is selected from one of SEQ. ID. NOS. 148 to 150; (f) Cys-A7-Cys-A8 is selected from one of SEQ. ID. NOS. 151 to 153; and (g) Cys-A9-Cys is selected from SEQ. ID. NOS. 154 and
 155. 70. An isolated protein of claim 69 wherein(a) Cys-A2-Cys is selected from SEQ. ID. NOS. 130 and 131; and (b) A3-Cys-A4 is selected from one of SEQ. ID. NOS. 135 to
 145. 71. An isolated protein of claim 70 having a NAP domain wherein(a) SEQ. ID. NOS. 66 and 129 have Glu at location 5; (b) SEQ. ID. NOS. 130 and 131 have Gly at location 2; (c) SEQ. ID. NOS. 151 to 153 have Gly at location 6 and Arg at location 9; and (d) SEQ. ID. NOS. 154 and 155 have Val at location
 2. 72. An isolated protein of claim 71 having a NAP domain wherein SEQ. ID. NOS. 151 to 153 have an amino acid sequence which includes (a), (b) and/or (c) wherein(a) is Val or Glu at location 2; (b) is Leu or Phe at location 7; and (c) is Lys or Tyr at location
 8. 73. An isolated protein of claim 72 having a NAP domain wherein(a) SEQ. ID. NO. 151 has Asp or Gly at location 14; (b) SEQ. ID. NO. 152 has Asp or Gly at location 13; and (c) SEQ. ID. NO. 153 has Gly at location
 13. 